Parus major (Great Tit): 107216343
Help
Entry
107216343 CDS
T04864
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03022
Basal transcription factors
pmaj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107216343
09124 Replication and repair
03420 Nucleotide excision repair
107216343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmaj03021
]
107216343
03400 DNA repair and recombination proteins [BR:
pmaj03400
]
107216343
Transcription machinery [BR:
pmaj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107216343
DNA repair and recombination proteins [BR:
pmaj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107216343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
IBR
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
107216343
NCBI-ProteinID:
XP_015508833
Ensembl:
ENSPMJG00000003821
LinkDB
All DBs
Position
Z:45907328..45921415
Genome browser
AA seq
395 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRLYEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGLIVTKSKRAEKMTEL
SGNSKKHVTALKKAVDMNCSGEPSLYNSLNLAMQTLKHMPGHTSREVLVVLSSLTTCDPA
NIYDLIKCLKAVKIRVSVIGLSAEVRVCTVLARETGGTYHVILDEGHYKELLMHHVSPPP
ASSTSECSLIRMGFPQHTIASLSDQDAKPSFSMAQLENNSDPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEVPLEEYKGERYCQGCQGEIKDQNVYIC
KVCQNAFCVECDMFVHDSLHCCPGCIHEHPAPVSV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaacccgagcggaccaagcgctgggaaggaggctacgaaagaacatgggaa
attcttaaggaagacgaatccgggtcgttgaaagcaaccatcgaggacattctcttcaaa
gcaaagaggaaaagactctatgaacaccatggacaagtccggcttggaatgatgcgtcac
ctttacgtggttgttgatggatcaagaacaatggaggaccaagacttaaaaccgaacaga
cttacttgcactctgaagttactggaatattttgttgaggagtactttgaccagaatcct
attagtcagattggattaattgtaaccaagagtaaaagagcggaaaaaatgacagaactc
tcaggaaactcaaaaaagcatgtaactgctctgaagaaagcagtggatatgaactgcagt
ggagagccttctctatataattccctaaatttggccatgcagactttaaagcacatgcca
ggacatacaagccgagaggttttggtagtcctcagcagtctgacgacatgtgatcctgcc
aacatctatgatctaattaagtgtttaaaagcagtaaagatcagagtgtctgtcatcggc
ttaagtgctgaagttcgagtttgtacagtacttgcccgagaaactggtggaacttaccac
gttattttagatgaaggtcattataaggaactgctgatgcaccatgttagtcctccacct
gccagttcaacttctgagtgctcccttattcgaatgggttttcctcagcatactattgct
tctctgtctgatcaagatgcaaagccctcctttagcatggcgcaactggaaaataacagt
gacccaggtcttacactgggtggatatttttgtcctcagtgcagagccaaatactgtgag
cttcctgtggaatgcaaaatctgtggtcttacattagtgtctgcacctcacctggctcgg
tcttaccatcacttgtttcctttagatgcctttcaggaagttccactggaagaatacaag
ggggaacggtattgtcaaggctgccagggagaaataaaagatcaaaatgtgtacatatgc
aaagtgtgtcagaatgcattttgtgtggaatgtgatatgtttgttcatgattcactgcac
tgctgtcctggctgtattcatgagcaccctgctcctgtatctgtatga
DBGET
integrated database retrieval system
