Parus major (Great Tit): 117243690
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Entry
117243690 CDS
T04864
Name
(RefSeq) DNA mismatch repair protein Mlh3-like
KO
K08739
DNA mismatch repair protein MLH3
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
117243690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmaj03400
]
117243690
DNA repair and recombination proteins [BR:
pmaj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
117243690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
117243690
NCBI-ProteinID:
XP_033371137
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All DBs
Position
5:complement(39154840..39161531)
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AA seq
1228 aa
AA seq
DB search
MSDGGAEWMTVLRAGSCCQSCPSPSHLGAAVRNRRRESRSRAELPASLDLVGRKLQLPAC
SLPVLAGAHAPSLRAGCPAARLRWSRAAAVAGPLRSGTWSSELPAVTCVSHLTDFDMIKR
LVEDVRARLRSGVTVNSLGQCVEELVLNSIDAKATCVAIRVDLEAFKIQVVDNGCGIGKE
DLKVIGKRYFTSKCSSVRDLENLTFYGFRGEALASIANMASVVEISSKTSRTAKTFMKLF
HNGQALEVYEAELNRPSGGTTVTVCNLFHQLPVRRKCMDPVLEIERVRQKVEAVSLMHPS
VSLSLRNDVSCSMVLQLPKTRDIYSRFCQIYGLGRSQKLREVNHKSGGFEISGFISTEGH
YNKNMQFLYVNRRLVLKTRLHKLIDFLLRKESIICKAKSVPASRQANSSPGRHRCGPELY
GIFVLNVTCAYSDYDMCLEPAKTLIEFQNWDVLLTCIEEGVKTFLKREHLFIEPCSEDIR
EFNEHNDFRLHNAPVLKPSVLDEKSVQESFKKACNEIVDSYEMCTLQSKDVKRKSITGKK
SSSLIQSSKNIQEAENAPVQNTAESSDPCRNSKAESPLPSKDGRVSDFIKSNTSEQEPKY
TNSSQKVSDTHLKPSEHLHSSFSGGARSEIRERDGCGDLWDCAENNIKDVGSQQGQVIQE
SIKVRVLNKDVIQSLPGRKDPTETAAGHETVSGSSLMRLCNTRRNRETTEVKDHARRGTS
ALKLCLRDLIKSVMQNESPHDCEQSETNLALNTQCRPGPVSAKDIFDHKVNVVIQSSNTK
GISSNINKEYTASFTREVCMTDSNENKPLSHRVREEIAMPTVTNKRPYETSNNMELPLAT
SSGIPRKKIVIKNTRRQIAVPRPQPSKKLSLSTQLGSLEKFRRYYGRVKPTVPTPMSKGS
ECGLPVLNSETNCDFSKNGNDNHDNLNSCETPPAEDTDSNNISQGFGSFEKTLFCSGEVS
QDEQALCQSPLTLSDYSLVSNKNTSCKRPPGSLSSKLSRMKTDHKEVKQLGEQFQTDSNG
KDDHSFDLESSNNDNLYNVCQTYKSSVEKVRECKSSISKEAACSQPDDVIAESVKSPVSS
SPLSSIEGDYTISLGSVLSLPAENDCTNIICKDKSTLGESLEQNMKDTEVPQVTLQGNLE
FSADHRSTDNPRNDLCSVWLQDFDALSGRTVYINKATGLSTYGTPPSEGFQTACIQDITT
MAVNVVSENGKRGCSCKNGMRKTVLLGA
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatggaggggctgagtggatgacagtcctcagagcgggatcttgttgccaaagc
tgtccctctccctcccacctcggtgccgctgtgaggaatcgccgccgggaaagccgcagc
cgggccgagctcccggcctccttggacctggtcgggcggaaactacaactcccggcgtgc
tctttacccgtgctcgcgggtgcgcacgcgccgtcgctccgcgcggggtgcccggcggcc
cggctccgttggtctcgcgcggcggccgttgcggggccgctccgctccggaacatggagc
agtgagctccctgctgttacttgtgtttctcatctaacagattttgacatgatcaaacgc
ttggtggaagatgtgcgagccaggctgcgttctggagtcactgtcaactcactcggacag
tgtgttgaggagcttgtcctcaatagcatcgatgccaaagcaacatgtgtagctatcagg
gtggatttggaagcttttaagatccaggtggtggacaatggctgtgggatagggaaagag
gacttaaaggttattggaaagcgctacttcaccagcaagtgcagttcagtgagggacttg
gagaacctgactttctatggcttcagaggagaggctttggcaagtatagccaacatggcc
agtgtagtggaaatctcatctaagaccagcaggacagcaaaaacatttatgaaactgttc
cacaatgggcaagcactggaagtatatgaagccgaattgaacagaccaagtggtggaact
acagtcactgtgtgcaatctgttccatcagttgccggtgaggagaaaatgtatggatcct
gtgctggaaattgagagagtgagacagaaggtagaggctgtttcgctaatgcatccttct
gtttccctttctttaagaaacgatgtttcttgttctatggtgcttcagctccctaagaca
agagacatctactctcggttttgtcaaatttatggactgggcagatcccagaagttgcga
gaagtaaatcacaagtctgggggatttgagataagtggttttatcagtactgagggacat
tacaataagaatatgcaattcttgtatgtgaatagaagacttgttttaaagacaagacta
cataaactaattgattttttattaagaaaagaaagtataatttgcaaggcaaaaagtgtc
cctgcaagccgtcaggctaattcaagccctggtcgccatcgctgtgggccagagttgtat
gggatctttgttctcaatgtaacctgtgcttacagtgactatgatatgtgcctggagcct
gcaaagactctgattgagttccagaactgggatgttcttctaacttgcatagaggaagga
gtgaaaacatttttgaaacgagagcatttatttattgaaccatgtagtgaggacatcaga
gaatttaatgaacataatgactttcgtttgcataatgctccagttctgaagccttcagtt
cttgatgagaagagcgtccaagaaagttttaagaaagcatgtaatgaaattgtggattct
tatgaaatgtgtaccttgcaatcaaaagatgtcaagaggaaatccattactggaaaaaaa
agttcaagtcttatacagtcaagtaaaaatatacaggaagctgaaaatgcccctgttcag
aacactgctgagtcatctgatccatgtagaaacagtaaagcagagagtccattgccaagc
aaagatggcagagtttctgatttcattaaatcaaatacttcagaacaggagccaaaatac
actaacagttcccagaaagtatcagatactcatctgaaaccttcagaacatcttcattcc
tcttttagtggaggggccagatcagaaataagagaaagagacggttgtggtgacctatgg
gattgtgcagagaataatataaaagatgtgggcagccagcaaggtcaagtaatacaggag
agcattaaggtccgtgtcttaaataaggatgttattcagtcactgcctgggagaaaagac
cctactgaaacagcagcgggacatgaaactgtctctggaagttcattaatgagactgtgt
aacacaagaagaaacagggaaacaactgaagtgaaagatcatgccagaagagggacatca
gcattaaagttgtgccttagagacctcataaaaagtgttatgcaaaatgagtccccacat
gactgtgaacaatcagaaacaaatcttgcattaaacacacagtgtaggcctggccctgtc
agtgccaaggatatttttgaccacaaagtgaatgttgtgattcagtcttcaaatactaag
ggtatttccagtaatattaataaagaatatacagcttcttttaccagagaagtatgcatg
actgatagtaatgagaacaaacctttgtcacatcgggtgagagaggagatagctatgcct
actgttaccaataaaagaccttatgaaacatcaaataatatggaattgccgctggcaact
tcttcaggtattcctcgcaagaaaattgttatcaaaaacactagaagacagatagctgtg
ccaagacctcagccctctaagaaactgagcttgtccacacagttgggatcattagaaaag
ttcaggaggtattatgggagagttaagcctacagtaccaacacccatgtcaaagggaagt
gaatgtggtctcccagttcttaattcagaaactaactgtgacttttcaaagaatgggaat
gacaatcatgataacttaaacagttgtgaaactccacctgctgaagatacagattctaat
aatattagccaaggttttggttcctttgaaaagactttattttgcagcggagaagtgtca
caggacgaacaagccctttgtcagagtcctttgacattgtctgattactctctggttagt
aacaaaaatacaagttgtaaaagacctcctggatcattatcatccaaactgtctagaatg
aaaactgatcacaaagaagtcaaacaacttggtgaacagttccaaacagactcaaacgga
aaagatgaccattcttttgatcttgaatcctcaaataatgataacttgtataatgtttgt
caaacatacaaatcctcagtggaaaaagtgagggagtgtaagtccagcatttctaaggag
gctgcgtgctcacaaccagatgatgtcatagcagagtctgtgaagagtcctgtcagctca
tcaccacttagcagtatagaaggagattacacaatctctttaggcagtgttttatcatta
cctgctgaaaatgattgtactaacatcatctgtaaagataaaagtacgttaggtgaatcc
ttagaacaaaatatgaaagatactgaggttccccaagtgactttacaagggaacttggaa
ttttctgctgaccacagaagcacagacaatcccaggaatgatttgtgttctgtctggctg
caagattttgatgctttatcgggaaggacagtatacatcaataaagcaactggactcagc
acctatggcactcctcctagtgaaggatttcaaactgcctgtattcaagatataacaaca
atggctgtgaatgttgtttcagagaatggtaagaggggttgtagttgtaaaaatggaatg
aggaaaactgttcttctaggtgcatga
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integrated database retrieval system
