Pseudomonas marincola: PMYSY11_3097
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Entry
PMYSY11_3097 CDS
T07318
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pmao
Pseudomonas marincola
Pathway
pmao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PMYSY11_3097 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmao03400
]
PMYSY11_3097 (nth)
Enzymes [BR:
pmao01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PMYSY11_3097 (nth)
DNA repair and recombination proteins [BR:
pmao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PMYSY11_3097 (nth)
Prokaryotic type
PMYSY11_3097 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
HHH_5
Carbam_trans_N
HHH_8
Motif
Other DBs
NCBI-ProteinID:
CAE6931511
LinkDB
All DBs
Position
PMYSY11:3226427..3227065
Genome browser
AA seq
212 aa
AA seq
DB search
MNAAKRYEIFRRLREDLPEPKTELAYSTPFELLIAVILSAQATDVGVNKATAKLFPVANT
PEAIYALGYDGLCSYIKTIGLYPSKAKNVIETCRMLVELHGSQVPETREALEALPGVGRK
TANVVLNTAFRQLTMAVDTHIFRFANRTGVAPGKNVLEVEKKLLKFVPKEFLLDAHHWMI
LHGRYVCLARKPRCGSCRIEDLCEFKQKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgccgccaaacgttatgagatattccgccggttacgcgaagacctgcccgagccg
aaaaccgagctggcgtacagcacgccattcgaactgctgattgcggtgattctgtcggcg
caagccaccgatgtcggcgtcaacaaagctactgccaagctgttcccggttgccaatacc
ccggaagccatttatgcgctcggatatgacggcctgtgcagctacatcaaaaccatcggc
ttgtacccgagcaaggccaaaaacgttatcgaaacctgtcgcatgctggtagagctgcac
ggcagccaggtacccgaaacgcgcgaagcactcgaagccctgcccggtgttggccgcaag
accgccaacgtggtgctcaataccgcgtttcggcaattgaccatggcggtcgatacgcac
attttccgcttcgccaatcgcaccggcgtagcccccggcaagaacgtgcttgaggtcgaa
aagaagctgttgaagttcgtccccaaggaatttttgctggatgcccaccactggatgatc
ctgcacggccgctacgtttgcctggctagaaagccgcgctgtggcagttgccggatcgaa
gatctgtgcgagttcaagcagaaaacttcggacgattga
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