Pelagerythrobacter marinus: NCF86_08955
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Entry
NCF86_08955 CDS
T08297
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pmas
Pelagerythrobacter marinus
Pathway
pmas01501
beta-Lactam resistance
pmas01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCF86_08955
01503 Cationic antimicrobial peptide (CAMP) resistance
NCF86_08955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmas03036
]
NCF86_08955
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmas02000
]
NCF86_08955
01504 Antimicrobial resistance genes [BR:
pmas01504
]
NCF86_08955
Chromosome and associated proteins [BR:
pmas03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NCF86_08955
Transporters [BR:
pmas02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NCF86_08955
Antimicrobial resistance genes [BR:
pmas01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NCF86_08955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_MFP_RND
RND-MFP_C
YknX_C
Beta-barrel_RND_2
CzcB_C
BSH_CusB
HH_EMRA
HH_CzcB
Biotin_lipoyl
BSH_CzcB
LPAM_1
Motif
Other DBs
NCBI-ProteinID:
USA38462
LinkDB
All DBs
Position
1770929..1772095
Genome browser
AA seq
388 aa
AA seq
DB search
MKRLVTGLFACALLSACSGIEEPPAPPAVPVKTVTVESRPIPNVIELPGRVEPVRVAEVR
ARVTGIVQKRLYEEGTDVVAGQPLFRIDPRELRAAYAQTEASLARARATAANARAVVERY
RPLVEENAISRQEYDAALAAAREAEANVAQIRAQLQASSLQLGYTTVRAPISGRAGRAQV
TEGALVTQGGGTLMTRIEQISPVYVSFAQAASEVIALRRAVAAGEVDLGEDDRIEVRLSF
SDGTEYAIPGHIDFLAFSVDEETGTVELRAEFANPSGLLLPGEFVRARIFAGQVNEGIAV
PQRAVTLGENGSSVFVVDREGNAALRPVQLGAMVDGLWIVESGLQPGDKVIVSNLQKLRP
GAPVTVANAPSAKPVAPAAAETPAAGAR
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgccttgttaccggcctcttcgcttgcgccctcctttccgcctgctcgggcatc
gaggaaccgcccgccccgcccgccgtgccggtcaagacggtgacggtcgaatcgcgcccg
atccccaatgtcatcgagctgccgggccgggtcgaaccggtccgcgtggccgaggtccgt
gcgcgtgtaaccggtatcgtgcagaaacgcctctacgaggaaggcaccgatgtcgtcgcc
gggcagccgctgttccggatcgacccgcgcgagttgcgcgccgcctatgcccagaccgag
gcgagcctcgcccgggcgcgggcgacggccgccaatgcccgcgcggtggtggagcgctat
cgcccgctggtggaggaaaacgccatcagtcggcaggaatacgacgccgccctggccgcc
gcgcgcgaggcggaggccaacgtcgcgcagatccgcgcccagctccaggcctcttcgctg
caactgggatataccaccgtgcgcgcgccgatttccggccgcgcgggccgcgcccaggtg
accgaaggcgcgctggtgacgcagggcggaggcacgctgatgacgcggatcgagcagatc
tcgcccgtctacgtcagcttcgcgcaggcggcgagcgaggtcatcgcgctgcggcgcgcc
gtcgccgcaggcgaggtggacctgggcgaggacgaccggatcgaggtgcgcctgtccttc
agcgacggcaccgagtacgcgatccccggccacatcgatttcctggccttctcggtcgac
gaggagaccggcacggtcgaactgcgggccgagttcgccaacccgtcggggctgctcctg
ccgggcgagttcgtccgcgctcggatcttcgccggccaggtgaacgaaggcattgccgtc
ccgcaacgcgcggtgacgctgggcgagaacggcagctccgtctttgtcgtcgatcgcgag
ggcaacgccgcgctgcgacccgtacagctcggcgcgatggtggacgggctgtggatcgtc
gagagcgggctgcagccaggcgacaaggtgatcgtcagcaacctgcagaaactgcgcccc
ggcgcgccggtgaccgtcgccaacgcgccttccgcgaagcctgtcgcccccgccgcggcc
gagacccccgctgccggtgcgcgctga
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