Pelagerythrobacter marinus: NCF86_15085
Help
Entry
NCF86_15085 CDS
T08297
Name
(GenBank) efflux RND transporter permease subunit
KO
K18142
multidrug efflux pump
Organism
pmas
Pelagerythrobacter marinus
Module
pmas_M00696
Multidrug resistance, efflux pump AcrEF-TolC
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmas02000
]
NCF86_15085
01504 Antimicrobial resistance genes [BR:
pmas01504
]
NCF86_15085
Transporters [BR:
pmas02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NCF86_15085
Antimicrobial resistance genes [BR:
pmas01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
NCF86_15085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
USA41176
LinkDB
All DBs
Position
plas1:complement(739..3849)
Genome browser
AA seq
1036 aa
AA seq
DB search
MSKFFIHRPVFAWVLAIIMMIAGGLAIMQLPIAQYPTIAPPAVAISATYPGADAQTVQDT
VTQVIEQNMNGIDNLMYMSSTSDSAGGVTITLTFKSGTDPDIAQVQVQNKLQLATPLLPQ
EVQQQGISVEKSSSSFLMVAGFISDNTSTTQDDISDYVASNVKDTISRLNGVGDVQLFGA
QYAMRVWLDGNLLNKYNLTPVDVINQLQVQNDQIAAGQLGGTPALKGQQLNASIIAQTRL
KDPAEFGKVTLRVNADGSVVHLKDVARIELGGENYNVVAKINGKPASGLGIKLATGANAL
DTAAAIKAKLAELQPYFPQGMKVVYPYDTTPFVKISIHEVVKTLFEAIILVFLVMYLFLQ
NIRATLIPTIAVPVVLLGTFAVLAMFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
VEEKLPPKEATEKSMSQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMAL
SVLVALILTPALCATLLKPASADHHEKKGFFGWFNAKFDRSVNHYTNSVSGILRCTGRYL
IIYLLIVVGMAILFMRLPTSFLPDEDQGVFMTMIQLPSGATQERTQKVLDTVTDYYLHKE
KANVESVFTVNGFSFSGQGQNSGMAFVSLKPWEERSGAENGVEAIIKRATVAFSQIKDAM
VFPFNLPAIIELGTATGFDFELIDQGNLGHSALTQARNQLLGMVREHPEQLVRVRPNGLE
DTPQFKLDVDQEKAQALGISLSDINETISAALGGYYVNDFIDHGRVKKVYVQADAKFRML
PSDINNMYVRSANGEMVPFSAFVTSRWVYGSPRLERYNGLPSMEVLGEAAPGKSTGDAMI
LMEQLASKLPAGIGYDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFSVM
LVVPLGVVGALLAASLRGLNNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGIIE
ATLEASRMRLRPILMTSLAFILGVLPLVISHGAGSGAQNAVGTGVMGGMLTATLLAIFFV
PVFFVVVRRRFTKHAE
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagttttttatccatcgaccggtcttcgcctgggtgctggcaatcatcatgatg
attgccggtggcctcgcaattatgcagctaccgattgcacaatacccgactatcgcgccg
ccagcggtggctatctccgcaacctatccaggtgcggacgcacaaaccgttcaggacacg
gtgactcaggttatcgaacagaacatgaacggtatcgataatctgatgtacatgtcctca
accagcgattccgcaggcggcgttaccatcaccctgacctttaagtcaggtacggatccg
gatattgcgcaagttcaggtgcagaataaactgcagctggcgacgccgcttcttcctcag
gaagtacagcagcaggggattagcgtcgagaaatcaagcagtagtttcctgatggttgcc
ggattcatctccgataacacgagtactactcaggatgatatatccgactacgttgcatcg
aacgtcaaagataccatcagccgccttaacggcgtcggcgatgtacagctcttcggcgcg
cagtatgccatgcgcgtctggctggacggtaatctcctgaataagtacaacctcacgcct
gtcgacgtcattaaccaactgcaggtacagaacgatcagatcgcagcaggccagcttggc
ggtacgccggcccttaaaggccagcagctaaatgcatccattattgctcagacgcgactg
aaggatccggcagagtttggcaaagtgactctgcgcgtgaacgcagatggctcagtggtg
cacctgaaagatgtggcacgtattgagctgggaggtgaaaactacaacgttgtcgcaaaa
atcaatggaaaaccggcttcaggactgggaattaagctcgctaccggcgccaatgccctc
gataccgccgcagcgattaaagcgaagcttgccgaactgcagccgtacttcccgcagggg
atgaaggtcgtctatccctatgacactacgccgtttgtgaaaatctctattcatgaggtt
gtgaaaacactgtttgaagcgattatcctcgtcttcctggtgatgtatctgttcttacag
aatatccgggccacgctgatccccaccattgcggttccggtcgtcctgctcgggaccttt
gccgtactggcgatgttcggttactccatcaatacgctaacgatgtttggcatggtgcta
gcaataggccttctggtcgacgatgctatcgtggtggtggaaaacgtcgaacgcgtcatg
gtagaagagaagcttccccccaaagaagcgacggaaaaatcaatgtcgcaaattcagggg
gcgctagtcggcattgccatggtgctatcggcagtgtttgtcccgatggccttctttggc
ggctctacgggggcgatctatcggcaattttctatcaccatcgtctctgccatggcgctg
tccgtactggtcgcgctgatcctgacccctgcgctgtgtgccacattactgaaacccgca
tcagccgatcatcatgagaaaaaaggattttttggctggtttaatgcgaaattcgatcgt
agcgtgaaccactacactaacagcgtcagcgggatcctgcgctgtaccggacgctacctg
atcatctatttgctgatcgttgtgggtatggccatcctgtttatgcgtctgcccacctcc
ttcttgccggatgaggatcagggggtatttatgaccatgatccagcttccttcaggcgca
acgcaggaacgcacgcaaaaggttcttgatacggttaccgattactatctgcataaagag
aaggcgaatgttgaaagcgtctttaccgttaacggctttagctttagcggtcagggtcaa
aactccggtatggcgtttgtcagcctgaagccatgggaagaacgcagtggcgcagagaat
ggcgttgaggcaatcatcaaacgtgcgaccgttgccttcagtcagattaaagatgctatg
gtctttcctttcaatctgccggcaattatcgaactgggtacggcgaccggttttgacttt
gagcttatcgatcagggtaaccttggccatagcgcgttaacccaggcccgtaatcaactt
ctgggtatggtgagagagcatcccgagcagctggtacgcgttcgccccaacgggctcgaa
gacacgccgcaattcaagctggatgttgatcaggagaaagctcaggctctgggtatttcg
ctatccgatatcaatgaaaccatttccgcggcgctagggggttactacgtcaacgacttt
attgaccatggacgagtgaaaaaagtctatgttcaggccgatgcaaaattccgtatgctg
ccgagcgatatcaataatatgtacgtccgcagcgcgaatggcgaaatggttccgttctcc
gcttttgtcacctcacgctgggtttatggttcaccgcgcctggagcgctataatggctta
ccctctatggaagttttgggtgaagctgctccggggaaaagtaccggcgatgcgatgatt
ttaatggagcagttagccagcaagcttcctgccggtattggttacgactggacgggaatg
tcctatcaagaacgtttatccggtaaccaggcgcccgcgctctacgccatttcgcttatt
gttgtctttctgtgtcttgcggcactttatgaaagttggtctattcccttctccgtcatg
ctcgtcgttccattaggggtagttggtgcattactggcagcgtcgttacgcgggcttaat
aatgacgtttatttccaggtgggcttattaacaactatcggcctctctgcgaaaaacgcg
attcttatcgtggagtttgcgaaagacctgatggataaagaaggcaaaggaattatcgaa
gccacacttgaagcatcgcgtatgcgtttacgccctatcctgatgacttcgctggccttt
atcctcggggttctgcctctggttattagccatggagccggcagtggcgcccaaaacgcg
gtcggtaccggcgttatgggcggaatgctgacggcaacattactggcgatcttctttgtt
cctgtcttcttcgtcgtggtaagacgccgctttacgaaacacgcagagtaa
DBGET
integrated database retrieval system