Pelagerythrobacter marinus: NCF86_15090
Help
Entry
NCF86_15090 CDS
T08297
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18141
membrane fusion protein, multidrug efflux system
Organism
pmas
Pelagerythrobacter marinus
Module
pmas_M00696
Multidrug resistance, efflux pump AcrEF-TolC
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmas02000
]
NCF86_15090
01504 Antimicrobial resistance genes [BR:
pmas01504
]
NCF86_15090
Transporters [BR:
pmas02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NCF86_15090
Antimicrobial resistance genes [BR:
pmas01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
NCF86_15090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
BSH_CusB
Beta-barrel_RND_2
YknX_C
HH_EMRA
CzcB_C
BSH_CzcB
DUF5667
Motif
Other DBs
NCBI-ProteinID:
USA41177
LinkDB
All DBs
Position
plas1:complement(3863..5002)
Genome browser
AA seq
379 aa
AA seq
DB search
MTPHVRVTLLSSLIIPAILLSGCDNSGDRQPHAQIPQVSVYVVHSAPLSVTTELPGRTSA
YRVAEVRPQVNGIILQRNFVEGSDVSAGQSLYQIDPATYQAAYNSTKGDEAKAEAAAAIA
HLTVKRYAPLLGTKYISQQEYDQAVATARQADADVIAAKAAVESARINLAYTKVTSPISG
RIGKSSVTEGALVTNGQTDAMATVQQLDPIYVDVTESSNDFMHLKQESLQHGSDTKSVLL
IMENGKPYALQGTLQFSDVTVDESTGSITLRAIFPNPQHALLPGMFVRARIDEGVSPNAI
LVPQQGVTRTPRGDASVMLVNDKNQVETRAVTASQAIGDKWLITSGLKAGEKVIVSGLQK
VRPGVTVKAEEDTATSVAQ
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgacacctcatgtcagggttacacttttatccagccttatcatcccggccatcctgctc
agcggttgcgataattcaggcgatcggcaaccgcatgcgcagatacctcaggtctccgtt
tatgtcgtacacagcgcgccgctgtccgtcaccacagagctacctggccgcacatcagcc
taccgcgtcgcggaagtccgcccgcaggttaacggaattatcctgcagcgtaactttgtc
gagggtagcgatgtcagcgcaggacagtcgctttatcaaatcgatccggcgacctatcag
gcggcttacaacagcacaaagggtgatgaagcgaaagcagaggcggcagccgccatcgcc
catttaacggtaaaacgctacgcgcctcttctcggcacaaaatatatcagccagcaagaa
tacgatcaggcggtggcgaccgcccgccaggccgatgccgacgttatcgccgcaaaagca
gccgtggaaagcgcgcgtattaacctggcgtacacaaaagtgacgtcgccaatcagcggc
cgcatcggcaaatccagcgtgaccgaaggtgccctggtgacaaatggtcagactgacgcg
atggcgacggtacagcagctcgatcccatttatgtggatgtcaccgaatccagtaatgat
ttcatgcacctgaaacaggaaagcctgcagcacggcagtgacaccaaaagcgtgctgttg
attatggaaaacggaaaaccttatgcgctccagggcacgctgcagttctctgacgtcacg
gtagatgagagcaccggctctattacgcttcgcgccatcttccccaacccacagcacgct
ctgctgccagggatgtttgttcgcgcccgcattgatgagggcgtgtcaccgaatgccatt
ctcgttcctcaacagggtgtcacccggacgccgcgcggcgatgccagcgtgatgctcgtt
aatgacaaaaaccaggtggaaacgcgagccgtcaccgcctcacaggcgattggcgataag
tggttaatcacgagcggtctgaaagccggtgaaaaggttatcgtcagcggtctgcagaaa
gtacgtcccggcgtcaccgtgaaggccgaagaggataccgcgacgtccgtcgcgcaataa
DBGET
integrated database retrieval system
