Paracoccus marcusii: CP157_02281
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Entry
CP157_02281 CDS
T07681
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
pmau
Paracoccus marcusii
Pathway
pmau03030
DNA replication
pmau03410
Base excision repair
pmau03420
Nucleotide excision repair
pmau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CP157_02281 (ligA)
03410 Base excision repair
CP157_02281 (ligA)
03420 Nucleotide excision repair
CP157_02281 (ligA)
03430 Mismatch repair
CP157_02281 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmau03032
]
CP157_02281 (ligA)
03400 DNA repair and recombination proteins [BR:
pmau03400
]
CP157_02281 (ligA)
Enzymes [BR:
pmau01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CP157_02281 (ligA)
DNA replication proteins [BR:
pmau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CP157_02281 (ligA)
DNA repair and recombination proteins [BR:
pmau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CP157_02281 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CP157_02281 (ligA)
MMR (mismatch excision repair)
DNA ligase
CP157_02281 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CP157_02281 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
Zn_ribbon_PF0610
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
QXI64513
LinkDB
All DBs
Position
complement(2264631..2266817)
Genome browser
AA seq
728 aa
AA seq
DB search
MGAAMAQDKSVGQPDRKMDRGQAADRIADLAARVAAANQAYHAEDAPQISDAEYDALKAQ
LAALERDFPDLALPDSPTGKVGAAPAEGFGKIVHAQRMMSLGNAFTEGDVAEFTARVRSF
LGLAPDMPLEVTAEPKIDGLSLSLRYEDGVLVHAATRGDGVVGENVTANARTISDIPHQL
EGDVPAILEVRGEVYMGHDDFAALNDAGRVFANPRNAAAGSLRQIDPTVTARRPLRFFAY
GWGQLSEPLAPTQMASVERLAALGFQTNPLTRLCTDTAQMIATWAEIEQQRATLGYDIDG
VVYKVNDLAFQGRLGFRSTTPRWALAHKFPAETAWTRLDRIEIQVGRTGALSPVARLEPV
TVGGVVVSNATLHNEDYIAGRDSSGAPIRDGRDIREGDWVKIYRAGDVIPKIADVDLSRR
PADSVPYVFPSHCPECGSEAIREPGDSVRRCTGGLICPAQAVEKLKHFVSRAAFDIDGLG
AKQIEMFFADDQLPIREPADIFTLADRDARNFTKLKNREGFGERSAEKLFAAIEDRRSIP
MARLIFALGIRHVGEVAAATLARHFHDWPALIAAIDGAAREPAFAASDDKARRAALADSP
NWAELTGIDGIGAVLVDSLVTTFAQPTERASIDRLATLLDIRPVDTANAVQTEISGKTLV
FTGTLERMTRAEAKARAEAMGAKVAGSVSAKTDLLIAGPGAGSKAAKAEALGVTVIDEDE
WLRIAGAG
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggcgatggcgcaggacaagtcggtggggcaaccggaccggaagatggatcgc
ggtcaggccgcggaccgcatcgcggatctggcggcacgggtcgccgccgcgaaccaggcc
tatcacgccgaggacgcaccgcagatatcggacgctgaatacgacgcgctcaaggcgcag
ctggcggcgctggagcgggactttcccgatctggcgctgcccgatagcccgaccggcaag
gtcggcgccgccccggccgagggcttcggcaagatcgtccacgcgcaacgcatgatgtcg
ttgggcaatgccttcaccgagggcgacgtcgccgaattcaccgcccgcgtccgcagcttt
ctgggccttgcccccgacatgcccctggaggtgacggctgagccgaagatcgacggcctg
tccctgtcgctgcgctacgaggacggcgtgctggtccatgccgcgacccgcggcgatggc
gtggtgggagagaacgtgaccgccaacgcccgcacgatttccgacatcccccaccaactg
gagggcgacgtccccgccatccttgaggtgcgcggcgaggtctacatggggcatgacgac
tttgcggcactgaacgatgcggggcgggtctttgccaatccgcgcaacgcggctgcggga
tcgctgcgccagatcgacccgacggtgaccgcgcgccggccgctgcgcttcttcgcctat
ggctgggggcagctgtccgaaccgctggcgccgacgcagatggcctccgtggagcggctg
gccgccctggggttccaaaccaatccgctgacgcgcctgtgcaccgacaccgcgcagatg
atcgccacctgggccgagatcgaacagcagcgcgccaccttgggctatgacattgacggc
gtggtctacaaggtgaacgaccttgcgttccagggacggcttggctttcggtccaccacg
ccccgatgggccttggcgcacaagtttccggccgagaccgcctggacccggcttgaccgg
atcgagatccaggtcggtcgcacgggcgccctgtcccccgtcgcgcggctggagcccgtg
accgtgggcggcgtggtcgtgtccaacgcgaccctgcacaacgaggattacatcgccggg
cgtgacagttctggcgcgcccatccgcgacggtcgcgacatccgcgagggggactgggtc
aagatctatcgcgccggcgacgtgatccccaagatcgccgatgtcgacctgtcgcgcagg
cccgcggacagcgtgccctatgtctttccgtcgcactgccccgaatgcgggtccgaggcg
atccgcgagccgggcgacagcgtgcgccgctgtaccggcggcctgatctgccccgcgcag
gccgtcgagaagctgaagcatttcgtcagccgcgcagccttcgacatcgacgggctgggc
gccaagcagatcgagatgttcttcgcagacgaccagctgcccatccgcgagcccgccgac
atcttcaccctggccgatcgcgacgcccggaacttcaccaagctgaagaaccgcgagggg
ttcggcgaacgctcggccgaaaaactgttcgccgcgatcgaggatcgccgttcgatccct
atggcccggctgatctttgccctgggcatccgccatgtgggcgaggtcgcggccgcgacc
ctggcccgccatttccacgattggcctgccttgatcgccgccatcgacggggcggcacgg
gagcccgcctttgccgcctcggacgacaaggcccgtcgcgcggcgttggccgacagcccg
aactgggccgagctgaccggcatcgacggcatcggcgcggtgctggtcgattcgctggtg
acgacattcgcgcagccgaccgaacgcgccagcatcgaccggctggcgacgcttctggac
atccggccggtggataccgccaatgcggtgcagaccgagatttccggcaagacgctggtc
ttcaccgggacgctggagcggatgacgcgcgcagaggccaaggcgcgggccgaggcgatg
ggggccaaggtcgcggggtccgtcagcgccaagaccgacctgctgatcgcggggcccggg
gcgggatccaaggccgccaaggccgaggccctgggcgtcaccgtcatcgacgaggacgaa
tggctgcgcatcgcgggggccggatga
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