Peromyscus maniculatus bairdii (prairie deer mouse): 102910262
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Entry
102910262 CDS
T11302
Symbol
Trpc6
Name
(RefSeq) short transient receptor potential channel 6 isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04022
cGMP-PKG signaling pathway
pmav04360
Axon guidance
pmav04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04022 cGMP-PKG signaling pathway
102910262 (Trpc6)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102910262 (Trpc6)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
102910262 (Trpc6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmav04040
]
102910262 (Trpc6)
Ion channels [BR:
pmav04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102910262 (Trpc6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
102910262
NCBI-ProteinID:
XP_006983838
Ensembl:
ENSPEMG00000012248
UniProt:
A0A6J0DPH7
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Position
7:5704692..5817509
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AA seq
927 aa
AA seq
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MSQSPGFVARRGGSPLAAPGARRNESQDYLLMDELGDDGCSQLPLPPYGYYPSFRGNENR
LTHRRQTVLREKGRRLANRGPAYMFNDHSTSLSIEEERFLDAAEYGNIPVVRKMLEECLS
LNVNCVDYMGQNALQLAVANEHLEITELLLKKENLSRVGDALLLAISKGYVRIVEAILNH
PAFAEGKRLATSPSQSELQQDDFYAYDEDGTRFSHDVTPIILAAHCQEYEIVHTLLRKGA
RIERPHDYFCKCTECSQKQKNDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALELSNE
LAVLANIEKEFKNDYRKLSMQCKDFVVGLLDLCRNTEEVEAILNGDAETRQPGDLGRPNL
SRLKLAIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLVVLAVAIGLPFLALI
YWCAPCSKMGKIMRGPFMKFVAHAASFTIFLGLLVMNAADRFEGTKLLPNETSTDNARQL
FRMKTSCFSWMEMLIISWVIGMIWAECKEIWTQGPKEYLFELWNMLDFGMLAIFAASFIA
RFMAFWHASKAQSIIDANDTLKDLTKVTLGDNVKYYNLARIKWDPSDPQIISEGLYAIAV
VLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYIGAK
QNEAFTTVEESFKTLFWAIFGLSEVKSVVINYNHKFIENIGYVLYGVYNVTMVIVLLNML
IAMINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLLYLLLKFKKW
MSDLVQGHKKGFQEDAEMNKRNEEKKFGILGSHEDLSKFSLDKNQLAHKQSSIRSSEDFH
LNSFSSPPRQYQKIMKRLIKRYVLQAQIDKESDEVNEGELKEIKQDISSLRYELLEEKSQ
NTEDLAELIRKLGERLSLEAKQEESHR
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgagccagagccccgggttcgtggcccggaggggcggctctccgctggctgcccctgga
gcgcggcgcaacgagagccaagactatctgctgatggacgagctgggagacgacggctgc
tcgcagctcccgctgccaccctatggctactaccccagcttccggggtaatgagaacaga
ctgactcaccggcggcagacagttctccgtgagaagggaagaagactggctaaccgagga
ccagcatacatgtttaatgatcactcaacaagcctgtctattgaggaggaacgctttcta
gatgcagctgaatatggcaacatcccggtggtgcggaaaatgctagaggagtgtctctcc
ctcaatgttaactgtgtggattacatgggccagaatgccctgcaattggcagtagccaat
gagcacctggaaattacagagctgttgctcaagaaggaaaacttgtctcgagttggggat
gctttgcttttagctatcagtaaaggttatgtacggattgtggaagcaatcctcaaccat
ccagcttttgctgaaggcaagaggttagccacaagccccagtcagtctgaactccagcaa
gatgacttttatgcctatgatgaagatgggactaggttctcccatgatgtgacaccaatc
attctggctgctcattgccaggaatatgaaatagtgcacacactcctgagaaagggtgcc
cggattgaacggcctcatgattacttctgcaagtgtacagaatgcagccagaaacaaaag
aatgactcattcagtcactccagatccaggattaatgcctacaaaggcctggcaagtcca
gcatacctgtctttgtccagtgaagatccagtcatgacagctttagaactcagcaatgag
ctggctgtgcttgccaacattgagaaagaattcaagaatgactacaggaagctgtccatg
cagtgcaaagatttcgtggttggtctcctggatctctgcagaaacacggaagaagtggag
gccatcctgaacggggatgcagagactcgccagcccggggacctcggccgtccgaatctc
agccgattaaaacttgccattaaatatgaagtaaaaaaattcgtagctcatccgaactgc
cagcaacagctcctgtccatatggtatgagaacctctctggtctacggcagcagacaatg
gcagtcaagtttctcgtggtccttgcggttgccattggactgcccttcctggctctcata
tactggtgcgctccatgcagcaagatggggaagataatgcgtggaccattcatgaagttt
gtagcacatgcagcttccttcaccattttcctggggctgctcgtcatgaatgcagctgac
agatttgaaggcaccaagctcctccctaatgaaaccagcacagataatgcaagacagctg
ttcaggatgaaaacatcctgcttctcatggatggagatgctcattatatcctgggtaata
ggcatgatatgggctgaatgtaaagaaatttggactcaaggccccaaagagtacttattt
gagttatggaatatgcttgattttgggatgctggcaatctttgcagcatcattcattgcg
agattcatggcgttctggcatgcatccaaagctcagagcatcattgatgcaaatgacact
ttgaaggacttgacaaaagtcacactgggagacaacgtcaagtactacaatctggccagg
ataaagtgggacccttctgatcctcaaatcatctctgaaggtctttatgcaattgctgtg
gtcttaagtttctccagaatagcttacattttaccagcaaacgaaagcttcggaccactg
cagatttcacttggaagaacagtaaaagatatcttcaaattcatggtcatattcatcatg
gtgtttgttgcctttatgattggaatgttcaacctctactcctactacattggtgcaaaa
cagaatgaagccttcacaacagttgaggaaagtttcaagacactgttctgggctatcttt
gggctttcagaagtgaagtcagtggtcatcaactacaatcacaagttcattgaaaacatt
ggctatgttctgtatggtgtctataatgtcacaatggttattgttttgctaaatatgtta
attgcaatgatcaacagttcattccaggaaattgaggatgatgctgacgtagagtggaag
tttgcaagggccaaattatggttttcctattttgaggagggaagaacacttccagtccct
ttcaatcttgtgccaagtccaaagtccctgctctatctcctgttgaaatttaagaaatgg
atgtctgacctggtccagggtcataagaaaggcttccaagaagatgcagagatgaacaag
agaaatgaagaaaagaaatttggaattttgggaagtcatgaagacctttcaaaattttca
cttgacaaaaatcagctggcacacaaacagtcaagcataaggagctcagaagacttccat
ttaaacagcttcagtagccctccaagacagtaccagaaaatcatgaaaagactcattaaa
agatatgtattgcaggctcaaattgataaggagagtgatgaagtgaatgaaggggaactg
aaggagatcaagcaggacatttcaagtcttcgttatgaactcctagaagaaaaatctcag
aacacagaagacctagcagaacttattcgaaaactgggggagagattgtccttagaggcc
aaacaggaggaaagtcacagataa
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