Peromyscus maniculatus bairdii (prairie deer mouse): 102917695
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Entry
102917695 CDS
T11302
Symbol
Iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
102917695 (Iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmav01007
]
102917695 (Iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmav03016
]
102917695 (Iars1)
Enzymes [BR:
pmav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
102917695 (Iars1)
Amino acid related enzymes [BR:
pmav01007
]
Aminoacyl-tRNA synthetase
Class I (U)
102917695 (Iars1)
Transfer RNA biogenesis [BR:
pmav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
102917695 (Iars1)
Prokaryotic type
Other AARSs
102917695 (Iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Plectin_PPL
GARS_C
Motif
Other DBs
NCBI-GeneID:
102917695
NCBI-ProteinID:
XP_006992331
Ensembl:
ENSPEMG00000012867
UniProt:
A0A6I9LXN3
LinkDB
All DBs
Position
5:131099961..131149879
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AA seq
1307 aa
AA seq
DB search
MAHADWTARSRAEPRAVSVASPPGAVPERGRLLQPGLARGFPSSRMVQQVPENISFPAEE
EKILQFWSKYNCFQECLKQSKNRPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQS
GFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNKQCRAIVMRYSTEWKSTV
TRLGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLVYRGVKVMPFSTACGTPLSNFESN
QNYKDVQDPSVFVTFPLEEDENTSLVAWTTTPWTLPSNLALCVNPEIQYVKIKDVARGKL
FILMEARLSALYKLESDYEILERFPGTSLKGKKYKPLFDYFIKCKENGAFTVLVDHYVKD
EEGTGVVHQAPYFGADDYRVCMDFNIIQKDSAPVCPVDASGCFTEEVTHFVGQYVKDADK
HIIRMLKEQGRLLVASTFTHSYPFCWRSDTPLIYKSVPSWFVRVEHMVDQLLKNNDLCYW
VPEFVREKRFGNWLKEARDWAISRNRYWGTPIPLWVSEDFEEVVCIGSVAELEELSGTKI
SDLHRESIDHLTIPSRCGKGLLRRVSEVFDCWFESGSMPYAQVHYPFESKREFEDAFPAD
FIAEGIDQTRGWFYTLLVLATALFGQPPFKNVIVNGLILASDGQKMSKRKKNYPDPVSII
NKYGSDALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAYRFFIQNVFRLHKEDG
VEFLYNEHTVRESPNITDRWILSFMQSLIGFFETEMAAYRLYTVVPRLVKFVDILTNWYV
RMNRRRLKGENGMEDCVMALETLFSVLLSLCRLMAPYTPFLTELMYQNLKMLIDPVSIRD
KDTLSIHYLMLPRVREELIDKKTENAVSRMQSVIELGRVIRDRKTVPIKYPLKEIVVIHQ
DPEALEDIKSLEKYIIEELNVRKVTLSTDKNKYGIRLRAEPDHMVLGKRLKGAFKAVMMA
IKQLSNEELEQFQKSGSIVVEGHELHEEDLRLMYTFDQATGGTAQFEAHSDAQALVLLDV
TPDQSMVDEGMAREVINRIQKLRKKCNLVPTDEITVYYNAKSEGRYLNNVIESHTDFIFA
TIKAPLKPYPVPTSDNILIQEQTQLKGSELELTLTRGSCVPGPACAYINLNICANGTEQG
GVLLLENPKGDNKLNLVKLKSVVSSIFGVKNAELSVFHGGTEIQNQTDLLSLSGRTLCVT
AGTTPSPVNSPGALLCQYINLQLLNAEPQECLTGTVGTLLLENPLGQNGLSHQGLVYEAA
KVFGLRSRRLKLFLNETQTQEITEDIPMKTLNMKTVYVSVLPTTADG
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggcacacgctgattggacggcgcggagccgggctgagcctcgcgctgtcagtgttgca
tcacctccgggcgcagttccggagcgtggtcgcctcctgcaacctgggctcgcccggggg
ttccccagcagcagaatggttcaacaagttccagaaaacatcagttttcctgctgaagaa
gagaaaatcttgcagttctggtccaaatataattgtttccaggaatgcttaaagcagtca
aaaaacaggccaaaatttaccttctacgatgggcctccctttgcaaccggactgcctcac
tatggacatatacttgcggggacaattaaagatatagttacaagatatgctcaccagagt
gggtttcacgttgacagaagatttggatgggattgtcatggcttacctgtggaatatgaa
attgataagacactggggatcaaagggccagaggatgtggccaaaatggggattgcggag
tataacaaacagtgccgagcaattgtgatgagatactctaccgagtggaagtctactgtt
accagacttggccgatggattgactttgacaatgactacaaaacactctacccacaattc
atggaatcagtctggtgggtcttcaagcagctgtatgacaaaggccttgtgtacagaggt
gtgaaagtcatgcccttctccaccgcctgtggcactcccctttctaacttcgaatcaaac
cagaattacaaggatgttcaggatccttcagtatttgtaacgttccctttggaggaagat
gaaaatacatccttagttgcttggacaaccactccttggactctacctagtaaccttgcc
ctgtgtgtcaatccagaaatacagtatgtgaagatcaaagatgttgccaggggaaaactg
ttcattttaatggaagccagattatcggccctttataagctagagagtgactatgagatc
cttgaaagatttcctggaacctctctcaaaggcaagaaatacaagcccctgtttgactac
tttattaagtgtaaagagaatggggccttcacagtgcttgttgaccactacgtgaaggat
gaagaaggcacaggagtcgtgcatcaggccccttactttggtgctgatgactatcgggtc
tgtatggacttcaacattattcagaaagactcagcccctgtttgccctgtggatgcttca
ggctgcttcacagaagaagtgacacattttgtgggacagtatgtgaaggatgctgacaaa
catatcattaggatgctgaaggaacagggccgactgcttgtggccagcaccttcactcac
agctaccctttctgctggaggtcagacactcccctcatttacaagtcggtgcccagctgg
tttgtgcgcgtggagcacatggtggaccagctactgaagaacaatgacctgtgttactgg
gtcccagagtttgtacgagaaaagaggtttggaaattggctgaaggaggcacgtgactgg
gcaatttccaggaacagatactggggcacccccatcccactgtgggtcagtgaagacttt
gaggaggtagtttgcattggatctgtggcagagcttgaagaattgtcgggaacaaaaatc
tcagatctccacagagagagcatcgaccacctgaccatcccatcccgctgtgggaaagga
ctgttgcggcgtgtctccgaggtgtttgactgttggttcgagagtggaagtatgccctat
gcccaagttcactatccatttgagagcaagcgagagtttgaggacgcttttcctgcagac
ttcattgccgaaggcattgatcaaaccagaggatggttttacaccctgctagtgctagcc
acagccctctttggacaaccacctttcaagaatgtgattgtgaatggacttatcttggca
agtgatggccaaaaaatgagcaaacggaaaaagaactacccagatccggtttccatcatc
aataagtatggttccgatgccctcaggttgtatctgatcaattcccctgtagtgagagca
gaaaacctccgctttaaggaggaaggcgtgcgggatgtcctcaaggatgtgctgctccca
tggtacaatgcgtaccgattcttcatccagaatgtctttaggcttcacaaggaagatggc
gtggaattcctgtacaatgagcacacagtcagagaaagccctaacatcacagaccggtgg
atcctgtccttcatgcagtctcttattgggttctttgagaccgaaatggcagcttacaga
ctatacactgtggtgcctcgcctggtcaagtttgtagatattctgaccaattggtatgtc
cgaatgaacaggagaagattaaagggtgagaatgggatggaagactgtgttatggctctg
gagacactgttcagtgtcctgctttctctgtgcagactgatggctccttacacaccattt
cttactgaattgatgtaccagaatctaaagatgctgattgaccctgtttctatccgggac
aaggacacactcagcattcactacctcatgctgccacgtgttcgagaagaactgattgac
aagaaaacggagaacgcagtgtctagaatgcagtccgtgatcgaactcgggcgagtgata
cgagaccggaaaactgttccaataaagtatcctttgaaggaaattgtggttatccaccaa
gacccagaagctcttgaggatatcaagtccttagagaagtatatcattgaggaattaaat
gttcggaaagttacgctgtctactgataaaaacaagtatggtattcgactaagggctgaa
ccagatcacatggtccttgggaagcgtctgaagggagcctttaaagcagtgatgatggcc
ataaagcagctgagcaatgaggagctggagcagttccagaaaagcgggagtattgttgtg
gaaggccatgaattgcacgaagaagatcttcgcctcatgtacacctttgaccaggccaca
ggagggactgcacagtttgaagcccactctgatgctcaggctttagtcctcttagatgtc
acacctgaccagtcaatggtggatgaaggcatggctcgggaagtcatcaatcgcatccag
aaacttcgcaagaagtgcaatctggttccaactgatgaaataacagtttattataatgca
aaatctgaaggaagatacctgaacaatgtcattgaaagccacaccgacttcatatttgcc
actatcaaagcccccttgaaaccatacccggttcctacatcagataatatccttattcag
gagcaaacacagttaaaggggtcggaattggaactcacactcaccagaggatcgtgtgtg
cctggtcctgcttgtgcttacataaaccttaacatttgtgcaaacggcactgagcaaggt
ggggtattgcttctggagaatccaaaaggtgataataagttgaaccttgtaaagctgaag
agcgttgtctccagcatatttggagttaaaaatgcagagctgtcagtcttccacggtgga
acagaaatacagaaccaaacggacttgctgagtctgagtgggaggacactctgtgtgact
gcaggaacaaccccctctccggtcaacagccccggcgctcttctgtgtcagtatatcaac
ctgcagctcctaaatgcagagccacaagagtgtttaacaggaactgtgggcactctcctg
ctcgaaaacccgcttggacagaatggactgagccaccaggggcttgtgtatgaggcagcc
aaggtgtttggacttcggagcaggaggctaaagctgttcctgaatgagactcagacgcag
gaaattacggaagatatcccaatgaagactttgaatatgaagaccgtgtatgtttctgtc
ctgccaacaactgcagatggctaa
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integrated database retrieval system
