Peromyscus maniculatus bairdii (prairie deer mouse): 102919639
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Entry
102919639 CDS
T11302
Symbol
Trpc3
Name
(RefSeq) short transient receptor potential channel 3 isoform X1
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04360
Axon guidance
pmav05017
Spinocerebellar ataxia
pmav05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
102919639 (Trpc3)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
102919639 (Trpc3)
05022 Pathways of neurodegeneration - multiple diseases
102919639 (Trpc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmav04040
]
102919639 (Trpc3)
Ion channels [BR:
pmav04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102919639 (Trpc3)
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GFIT
Other DBs
NCBI-GeneID:
102919639
NCBI-ProteinID:
XP_006991893
Ensembl:
ENSPEMG00000010325
UniProt:
A0A6I9M996
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Position
6:2453610..2522466
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AA seq
909 aa
AA seq
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MSTKVRKCREPARVTLPAPEEEDGEAEGAEPQRRRRGWRGVNGGLEPPCQRAPPSPGPDA
SSEGSPSRWRTAGMRDKGRRQAVRGPAFMFGARGPSLTAEEERFLDAAEYGNIPVVRKML
EESQTLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARIGDALLLAISKGYVRIVE
AILGHPGFAASRRLTLSPCEQELRDDDFYAYDEDGTRFSPDITPIILAAHCHKYEVVHLL
LLKGARIERPHDYFCRCADCAEKQRLDAFSHSRSRINAYKGLASPAYLSLSSEDPVLTAL
ELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAILNGDLESAEPLET
HRHKASLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTIAIKCLVVLVVALG
LPFLAIGYWIAPCSRLGKILRSPFMKFVAHAASFIIFLGLLVFNASDRFEGITTMPNITV
IDYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELWLEGPREYIVQLWNVLDFGMLSI
FIAAFTARFLAFLQATKAQQYVDNHVQESDLSEVTLPPEVQYFTYARDKWLPSDPQIISE
GLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAFMIGMFILY
SYYLGAKVNPAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFIENIGYVLYGIYNVTMV
VVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPFSLVPSPKSFVYF
IMRIANFSKCRRRRLQKDLELGMGNSKSRLNLFTQSNSRVFESHSFNSILNQPTRYQQIM
KRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDKSQATEELAILIHKLSEK
LNPSVLRCE
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaaggtcaggaagtgccgggagcccgcgagggtgaccttgcctgcgccggag
gaggaggatggcgaggccgagggagcggagccgcagcgccgccgccggggctggaggggc
gtcaacggcgggctggagccgccctgccagcgcgcgccgccgtccccggggcccgacgcg
tcctcggagggcagcccatcgaggtggcgcacggcagggatgcgtgacaagggccggcgc
caggcggtgcgtggcccggccttcatgtttggtgctcgtgggcccagcctcacagccgag
gaggagcgcttcttggacgccgcagagtacggcaacatccccgtggtgcgcaagatgctg
gaggagtcacaaacgctcaatgtcaactgtgtggactacatgggtcagaacgcactgcag
ttggctgtaggcaatgagcatctggaggtgaccgagctgctgctgaagaaggagaacctg
gcacggatcggtgatgcgctgctgctagccatcagcaagggctatgtgcgcatcgtggag
gccatcctcggccacccaggctttgcggccagccgacgcctgacacttagcccttgcgag
caggaactgcgggacgacgacttctatgcctatgatgaggatggtacacgcttctcgcct
gacatcacgcccatcatcctggctgcacactgccataagtacgaggtggtgcacctgctg
ctactcaagggcgcgcgcatcgagcggcctcacgactacttctgtcgttgcgcggactgt
gccgagaagcagcggcttgatgccttcagccactcgaggtctaggatcaacgcgtacaag
ggactggccagccctgcatacttgtcgctctccagcgaggaccctgtgctcacagccctg
gaactcagcaatgagctggccaagctagccaacatagagaaggagttcaagaatgactac
aggaagctctccatgcaatgcaaagactttgtagtgggcgtgctggacctgtgtcgagac
tcggaagaggtggaagccattctgaatggagatctggaatcagcagagcctctggagaca
cacaggcacaaggcttcgctgagtcgagtcaaacttgccatcaaatatgaagtaaaaaag
tttgtggctcaccccaactgccaacaacagcttttgacgatctggtatgagaatctctcc
ggccttcgggagcagacgatcgctatcaagtgcctggtggtgttggtcgtggccttgggc
cttccattccttgctattggctattggattgcaccttgtagcaggctggggaagattctc
cgaagccccttcatgaagttcgtggcacacgctgcctccttcatcatctttctgggtctg
cttgtgttcaacgcctcagacaggtttgaaggtatcaccacaatgccaaacatcactgtt
attgactatcccaagcagatcttcagggtgaagaccacccagttcacatggacagaaatg
ctaattatggtctgggttcttgggatgatgtggtcggagtgtaaggagctctggctggaa
ggaccccgggagtacatagtgcagttgtggaatgtgctcgattttggcatgctctccatc
ttcatcgcggccttcacagccaggttcctagctttcctgcaggcaacaaaggctcagcag
tacgtggacaaccacgtgcaagagagtgatctgagcgaagtcacactcccacctgaggtt
cagtatttcacctacgctagagataaatggctcccttctgaccctcagatcatatctgaa
ggcctttatgccatagctgtggtactcagcttctcccggattgcatacatcctccctgca
aatgagagctttgggcccttgcagatctcccttggaaggaccgtgaaggacatatttaag
ttcatggttctgttcattatggtgtttctggctttcatgattggcatgttcattctttat
tcttactaccttggggccaaagtcaatcctgcttttaccacggtcgaagaaagtttcaag
actttattttggtccatatttggactgtctgaagtgacttctgttgtcctcaagtatgat
cacaaatttatagagaatattggatatgttctttatggaatatacaatgtaactatggtg
gtggttttactcaacatgctaattgctatgattaacagctcataccaagaaattgaggat
gacagtgatgtggaatggaagtttgctcgttcaaaactttggttatcctactttgatgat
ggaaaaacattacctccacccttcagtctggtccccagtccaaaatcgttcgtttatttc
atcatgaggatcgctaacttttccaaatgcaggaggagaagacttcagaaggatctggag
ttgggaatgggtaactcgaagtccaggttaaacctcttcactcagtctaactcgagagtt
tttgaatcacacagttttaacagcattctcaatcagccaacacgctatcagcagatcatg
aaaagactcataaaacggtatgttttgaaagcacaagtagacaaagaaaacgatgaagtg
aacgaaggtgaattgaaagaaatcaagcaggatatttccagccttcgttatgaacttttg
gaagacaagagccaagcaacagaagaattagccatcttgattcataaactcagtgagaaa
ctgaaccccagtgtgctgagatgtgaatga
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