Peromyscus maniculatus bairdii (prairie deer mouse): 102920728
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Entry
102920728 CDS
T11302
Symbol
Setdb1
Name
(RefSeq) LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETDB1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav00310
Lysine degradation
pmav01100
Metabolic pathways
pmav04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102920728 (Setdb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
102920728 (Setdb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmav03036
]
102920728 (Setdb1)
Enzymes [BR:
pmav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
102920728 (Setdb1)
Chromosome and associated proteins [BR:
pmav03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102920728 (Setdb1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
102920728 (Setdb1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
102920728
NCBI-ProteinID:
XP_076430680
Ensembl:
ENSPEMG00000010553
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Position
6:complement(75307452..75346440)
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AA seq
1285 aa
AA seq
DB search
MSSLPGCISLDAAPAAADSEDIAELQQAVVEELGISMEDLRQFIDEELEKMDCIQQRKKQ
LAELETWVVQKESEVAYVDRLLDDASRAVINCESLVKDFYSKLGLQYRDSSSEDEASQPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLGQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGLGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLFVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDSSCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASAMEKKQGAPFRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPMEPPQPTAPPAPPAALPLSPQAGDTESLESQL
AQSRKQVAKKSTSFRPGSVGSGHSSPASPTLGENVPAGKLGINQTYRPPLASVTSPPAPA
APPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRIRPMRSEQYRGKNPLLVPLLY
DFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETSCDFLFLEMFCLDPYVLV
DRKFQPFKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINTGPEFL
VGCDCKDGCRDKSKCACHQLTIQATACTPGGQVNPNSGYQYKRLEECLPTGVYECNKRCK
CDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEG
LEMGDEYFANLDHIESVENFKEGYESDVRSSSDSSGVDMKDQEDGNSGSEDPEESNDDSS
DDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSEMASKDSRPPDLGPPHVPIPPSASVG
GCKPPSSEETPKNKVASWLSCNSVSESGFADSDSRSSFKTSEGGDGRAGGGRGEAEKAST
SGLSFKDEGDNKQTKKEDPDDRNKMSVVTESSQNYGHHPPMKSEGLRRPSSKTSVPQSQR
LVASTPSNPDDVLTLSSSTESEGESGASRKPTAAGQTPATAVDSDDIQTISSGSDGDDYE
DKKNLSGPTKRQVAVKSTRGFALKSTHGIAIKSTNMASVDKGESAPVRKNTRQFYDGEES
CYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYN
YEVGSVEGKELLCCCGAIECRGRLL
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccctccctgggtgcatcagtttggacgcagccccagctgcagctgactctgag
gacattgccgagctgcagcaggccgtggtcgaagagctgggcatctccatggaggacctt
cgtcagttcattgatgaagagctggaaaagatggactgtatccagcagcgcaagaagcag
ctggcagagctggagacgtgggtagtgcagaaggagtctgaggtggcttatgttgaccgt
ctgcttgatgatgcatccagggcagtgattaactgtgagtcgttggtgaaggatttctac
tctaagctgggactgcagtatcgtgacagtagctccgaggatgaagcttcccagcctaca
gaaatcattgagattcctgatgaagatgatgatgtcctcagtattgattcaggtgatgct
gggagcagaactccaaaagaccagaagctccgtgaagctatggctgccttaagaaaatca
gctcaggatgtccagaagttcatggatgctgtcaacaagaaaagcagttcccaggatcta
cataaaggaaccttgggtcagatgtctggagaactgagcaaagatggggacctgatagtc
agcatgcggatcctgggcaagaagaggactaagacctggcacaaaggcaccctcattgcc
atccagactgttggtctaggaaagaagtacaaagtgaaatttgacaacaaaggaaagagt
ctgctgtctggcaaccatattgcctatgattaccaccctcctgctgacaagctgtttgtg
ggcagtcgagtggtggccaaatacaaagatgggaatcaggtctggctctacgctggcatt
gtagctgagacccccaacgtcaagaacaagctcaggtttctgattttctttgatgatggg
tatgcctcctatgtcacgcagtcagagctgtaccccatttgccgaccactgaaaaagact
tgggaggacatagaagacagctcctgccgagacttcatagaggaatatatcactgcctat
ccaaaccgccccatggtacttctcaagagtggccagcttatcaagacggagtgggaaggc
acatggtggaagtctcgagttgaagaggtggatggcagcctcgtcaggatcctctttctg
gatgacaaaagatgtgagtggatctaccgaggctctacacgcctggaacccatgttcagt
atgaagacatcatcagcgtctgcaatggagaagaagcagggggcaccattcagaacccgt
cctaatatgggtgctgtgaggagcaaaggccctgttgttcagtacacgcaggacctgacc
agcactgggacccagttcaagcccatggagcccccacagcccacagccccacctgccccg
ccggctgcgcttcctctttccccgcaagcaggtgacaccgaaagcttagaaagccaactt
gctcagtcacggaagcaagtggccaaaaagagcacatcgtttcggccaggatctgtgggt
tctggccattcttcccctgcttcgcccacactcggtgaaaatgtgcctgctgggaaactt
ggaatcaaccagacatacagaccgcctttggcttcagtcacatctcccccagcgcctgca
gcccctccagccttccatggcatgttagagcgggcgccggctgagccttcctaccgggcc
cccatggagaagctcttctacttacctcacgtctgcagttacacttgcctatcccgcatc
agacccatgaggagtgaacagtaccggggcaagaaccccctgctagtcccgctgctgtat
gacttccggaggatgacagcccggcgtagagtgaaccgcaagatgggctttcatgtcatc
tacaagacaccctgtggtctctgccttcggacaatgcaggagatagaacgctaccttttt
gagactagctgtgacttcctattcctggaaatgttctgtttggatccatatgttcttgtt
gacagaaagtttcagccctttaagcctttttactatattttggacatcacctacggcaag
gaagatgttcctctgtcctgtgttaatgagattgacacaacccccccgccccaggtggcc
tacagcaaggagcgcatccctggcaagggtgttttcatcaacaccggccctgagtttctg
gtcggctgtgactgcaaggatgggtgtcgggataaatccaaatgtgcctgccatcagcta
actatccaagccacagcttgtaccccagggggtcaagtcaaccctaactctggctaccag
tacaaaagactagaagagtgtctgcccacaggggtttatgagtgtaacaaacgctgcaaa
tgtgacccaaacatgtgcacaaatcggttggtgcagcatggactacaagttcgactacag
ctatttaagacacagaacaagggctggggtatccgctgcttggatgacattgccaaaggc
tcttttgtctgtatttatgcaggcaaaatcctgacagatgactttgcagacaaagaaggc
ctggagatgggtgatgagtactttgcaaatctagaccacattgaaagtgtggagaacttc
aaggaagggtatgagagtgatgtccgaagttcctctgacagcagtggggtagacatgaag
gaccaggaagatggcaacagcggttcagaggaccctgaagaatccaatgatgacagctct
gatgataacttctgtaaggatgaggacttcagcaccagttcagtgtggcgtagctatgcc
acccgcaggcagacgcggggtcagaaggagaatggactgtctgagatggcttctaaagac
tcccgacccccagacctcgggcctccacatgtccctatccctccctcggcatctgtaggg
gggtgcaaaccaccttcatctgaagagactcccaagaacaaggtggcctcatggttgagc
tgcaacagtgtcagtgaaagtggatttgctgactctgacagccgttcttccttcaagact
agtgaaggtggagatggccgggctgggggggggcggggagaggctgagaaggcctctacc
tcaggattgagcttcaaggatgaaggagataataagcaaactaagaaagaggaccctgat
gaccgaaacaagatgtcagtagtgactgaaagctctcagaactatggacaccatcctccc
atgaagtctgaagggcttcgccgaccgtctagtaaaacttctgtgccccaaagccagcga
cttgtggcgtcgactccgtcaaaccctgatgatgtgctgaccctgtccagcagcacggag
agtgagggggagagcggcgccagccggaagcccaccgccgccgggcagaccccggccacc
gccgtggacagcgatgacatccagaccatctcttctggctccgatggcgatgactatgag
gacaagaagaacttgtctggtccaacgaagcgccaggtggcggtaaaatcaacccgaggc
tttgctcttaaatcaacccatgggattgctattaaatcaaccaacatggcttccgtggac
aagggggagagcgcaccagttcgtaagaacacacgccagttctatgatggtgaagagtct
tgctacatcattgatgccaagcttgaaggcaaccttggccgctacctcaatcacagttgc
agccctaacctgtttgtccagaatgtctttgtggatactcacgatcttcgcttcccttgg
gtggccttctttgccagcaagaggatccgggctggaacagaacttacttgggactacaac
tacgaagtgggcagtgtggaaggcaaggagctgctgtgctgctgcggggccattgaatgt
cgagggcgtcttctttaa
DBGET
integrated database retrieval system
