Peromyscus maniculatus bairdii (prairie deer mouse): 102920814
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Entry
102920814 CDS
T11302
Symbol
Rnf123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmav04121
]
102920814 (Rnf123)
Enzymes [BR:
pmav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102920814 (Rnf123)
Ubiquitin system [BR:
pmav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102920814 (Rnf123)
Multi subunit type E3
KPC complex
102920814 (Rnf123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
102920814
NCBI-ProteinID:
XP_042137575
Ensembl:
ENSPEMG00000010562
UniProt:
A0A8C8VUB0
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Position
7:complement(106138679..106168074)
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AA seq
1314 aa
AA seq
DB search
MASKGAGMSFSRKSYRLTSDTEKSRVTGIVQEKLLNDYLDRIFSSPDHGPPAATSRKPLN
FHNLPEHVDQLLQVDSEDEESQGQVEGRLGPSTVVLDHTGGFEGLLLVDDDLLGVIGHSN
FGTIRSTTCVYKGKWVYEVLISSQGLMQIGWCTINCRFNQEEGVGDTHNSYAYDGNRVRK
WNVTTTNYGKAWAAGDIVSCLIDLDDGTLSFCLNGVSLGTAFENLSRGLGMAYFPAISLS
FKESVAFNFGSRPLRYPVAGFRPLQDPPFADLVRAQRLLGCFQAVLSVELDPVEGRLVEK
ESSAWQLQGQPTVLLTLAHIFHHFAPLLRKVYLVEAVLMSFLLGITEKGTPEQAQAVVHQ
VLDLLWLFMEDYEVQDCLKQLMMSLLRLYRFSPIVPDLGLQIHYLRLTISILRHEKSRKF
LLSNVLFDMLRSVVFFYIKSPLRVEEAGLQELIPTTWWSHRSSREGRDGKEAKEETPEER
QRRRAYERGCQRLKKRIEVVEGLQVQILKLLLDNKDDNGGEASRYIFLTKFRKFLQENAS
GRGNMPMLCPPEYMVCFLHRLVSALRFYWDEYKASNPHASFSEEAYIPPQIFYNGKVDYF
DLQRLGGLLSHLRKTLKDDLASKANIVIDPLELQAATMDDLDEDEEPAPTAAQRPMQALA
MGGALPLPRAGWLSSPTLGRANRFLSTAAVSLMTPRRPLSTIEKVKVRSLNVEQRTREDI
EGSHWNEGLLLGRPPEEPEQPLTENSLLEVLDGTVMMYNLSVHQQLGKMVGVSDDVNEYA
MALRDTEDKLRRCPKRRKDILAELTKSQKVFSEKLDHLSRRLAWVHATVYSQEKMLDIYW
LLRVCLRTIEHGDRTGSLFAFMPEFYLSVAINSYSALKNYFGPVHSMEELPGYEETLTRL
AATLAKHFADPRIVGTDIRDSLMQALASYVCYPHSLRAVERIPEEQRIAMVRNLLAPYEQ
RPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDANLPSLQKPCPSTLLQQHMADLLR
QGPDVAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSVS
LLRVLEMTITLVPEIFLDWSRPTSEMLLRRLAQLLNQVLNRVTAERNLFDRVVTLRLPGL
ESVDHYPILVAVTGILVRLLVHGPASETEKATSVLLADPCFQLRSICYLLGQPEPLAPGP
ALPAPDRKRFSLQSYTDYISAEELAQVEQMLAHLTAASAQAAAASLPTSEEDLCPICYAH
PISAVFQPCGHKSCKACINQHLMNNKDCFFCKTTIASVEDWDKAANTSATSSAA
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaagggggctggcatgtctttttcccgaaagagctataggctgacctcagat
accgagaagtccagggtcacaggcattgtgcaggagaaactactgaatgactacctggac
cgcatcttttcctcccctgaccatgggccccctgcagccaccagcaggaaacccctgaac
ttccataacctgccagagcatgtggaccagctgctacaggtggacagtgaagatgaggag
agccagggacaagttgaagggcgacttgggccatctactgtagtcctagaccacacagga
ggctttgaggggcttctccttgtggatgatgacctcctgggggtgattggacacagcaac
tttggtacgatccgttctaccacatgtgtgtacaaagggaagtgggtctacgaggtgctc
atctcctcccaggggctcatgcagatcggctggtgcaccatcaactgccgctttaatcag
gaggaaggggttggagacacacacaactcctacgcctatgatgggaaccgggtacgcaaa
tggaacgtgaccacaacgaattatggcaaggcatgggcagcgggggacatcgtgagctgc
ctgattgatctggatgatggtactctatccttttgcctgaatggtgtgtcactgggcact
gcctttgagaacctgtccaggggcctaggaatggcctacttcccagccatcagcctgtcg
ttcaaggagtcggtggcattcaacttcggcagccgtcctttgcgctacccagttgcgggc
ttccggcccctgcaggaccctccctttgcggacctggtgcgggcacagagattgctgggt
tgcttccaggcggtgctgagtgtggagctggaccctgtggaagggcggttggtggagaag
gagagctctgcgtggcagctgcagggccagcccacggtcctcctcacactggcccacatc
ttccatcacttcgcaccactgttgcgcaaggtctacctagtggaggctgtgctcatgagc
ttcctgctgggcatcacggagaagggcacgcctgagcaggcgcaggctgtggtacaccag
gtcctggacctcttgtggctcttcatggaggactacgaggtacaggattgcctcaagcag
ttgatgatgtccctgctacgtctctaccggttctcgcccattgtcccagacctgggtctg
cagatccactacctgcgcctcactatttccatcctgagacacgagaagtcccgcaagttt
ctgcttagcaacgtccttttcgacatgctccggtccgtggtcttcttttacattaagagt
cccctgcgtgtggaggaggctggcctgcaggaactcattcccaccacctggtggtcgcat
cgctccagcagggagggcagagacggtaaggaggcgaaggaggagacccccgaggagcgg
cagcggaggcgggcctatgagcgcggctgccagagactcaagaagcgcatcgaagtggtg
gaagggctacaggtccagatcctgaagctgctgttggacaataaagacgacaatggcggt
gaagcttccaggtacatctttctgacaaaattccggaagtttctgcaggagaatgccagc
ggccgggggaacatgcccatgctctgcccccctgagtacatggtctgcttcttacaccgc
ctggtatctgccctgcgcttctattgggatgaatacaaagcttccaacccccacgcttcc
ttcagtgaggaggcttacatcccgccccagatcttctataacggcaaggtggattacttt
gacctgcagcgccttgggggcctcctctcacaccttcgaaagaccctgaaagatgacctt
gcttccaaagccaacatcgtgatcgaccccctggagctccaggcagctaccatggatgac
ctggatgaggacgaagagccagcccccacggcggcccagcgtcccatgcaagccctggcc
atgggaggggcactgcccctgccccgggcaggctggctcagttctccaaccctgggccga
gccaaccgcttcctcagcacagcagctgtgagcctcatgaccccacggcggcctctgagc
accatagagaaagtaaaggtccgctcgctgaatgtggaacagaggactcgtgaggacatt
gagggcagccactggaatgagggcctgctgttggggagaccccctgaggagcccgagcag
cccctcaccgagaactcgctgctggaagtcctggacggcacagtcatgatgtataacctc
agcgttcaccagcagctgggcaagatggtgggtgtgtctgatgatgtcaacgagtacgca
atggccctgagggacacagaggacaagctccgccggtgccccaagaggcggaaggacatc
cttgcagagttgaccaagagccagaaagttttctcagaaaagctggaccacctgagccgc
cggcttgcgtgggtccatgccactgtctactcccaggagaaaatgctggacatctactgg
ctgttgcgtgtctgcctacggaccatcgagcatggggatcgcacaggatctcttttcgcc
ttcatgcctgagttctacctgagcgtggccatcaacagctacagtgctctcaagaattat
tttggccctgtgcacagcatggaagagctcccaggctatgaagagaccctgacccgcctg
gctgccacccttgccaagcactttgctgacccacgaatcgtaggcactgacattcgagac
tcactgatgcaggccctggccagctacgtgtgctacccacactccctgcgggctgtggaa
cggatccctgaggagcagcgtattgccatggtgaggaaccttttggcaccctatgagcaa
cggccctgggcccagaccaactggatcctggtgcggctttggaggggctgtgggtttggg
taccgctatacacggctgccacatctgctgaaaaccaaaccagaggatgccaatttgccc
agcctccaaaaaccctgcccctccaccctgctgcagcagcacatggcagacctgcttcga
cagggtcctgatgtagcccctagcttcctcaacagtgtccttaaccagctcaactgggcc
ttctccgagttcatcggcatgatccaggagattcaacaggctgctgaacgcctagagcga
aacttcgtggacagtcggcaactcaaggtctgtgccacctgctttgacctctcggtcagc
ctgttgcgtgtcctggaaatgaccatcacactcgtgcctgagatattcctggactggtcc
cgccctacctcggagatgctgctgcggcggcttgcacagctgctgaaccaggtgctgaac
cgggtgacagctgagaggaacctgtttgaccgtgtagtcaccctgcggcttcctggcctg
gagagcgtggaccactaccctatcctggtggcagtgaccggcatcctggtacgcctcctg
gtgcatggtccagcctcagagacggagaaagccacctctgtgctcctggctgacccctgc
ttccagctccgttccatatgctatctcctggggcagccagagcctctagcacccggccca
gccctgcctgcccctgaccggaaacgcttctctctacaaagttatacagattatatcagt
gctgaggagctggcccaggtggagcagatgctggcacacctgactgctgcgtctgcccag
gcagcagcggcctccctgcccaccagtgaagaggacctctgcccaatctgctatgcccac
cccatctccgctgtgttccagccttgtggccacaagtcctgcaaagcctgcatcaatcag
cacctgatgaacaacaaggactgcttcttctgcaaaaccaccattgcatctgtagaggac
tgggacaaggcggccaacacaagtgccacctcctcggctgcctag
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integrated database retrieval system
