Peromyscus maniculatus bairdii (prairie deer mouse): 102927917
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Entry
102927917 CDS
T11302
Symbol
Runx2
Name
(RefSeq) runt-related transcription factor 2 isoform X1
KO
K09278
runt-related transcription factor 2
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04928
Parathyroid hormone synthesis, secretion and action
pmav05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09150 Organismal Systems
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
102927917 (Runx2)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
102927917 (Runx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmav03000
]
102927917 (Runx2)
Transcription factors [BR:
pmav03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
102927917 (Runx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Runt
TFIIA
DUF2828
Trp_oprn_chp
DUF702
BAF1_ABF1
ECM10
eIF-3_zeta
TagH_SH3-like
Plasmodium_Vir
FlaG
Motif
Other DBs
NCBI-GeneID:
102927917
NCBI-ProteinID:
XP_076413913
Ensembl:
ENSPEMG00000010158
LinkDB
All DBs
Position
21:50764022..51093871
Genome browser
AA seq
623 aa
AA seq
DB search
MLHSPHKQPQNHKCGASFLQEDSNKSLVLKWLISAGHYQPPRASESVSALTTVYAVISKA
ASSIYHRGHQLYLEGKGRTMASNSLFSTVTACQQNFFWDPSTSRRFSPPSSSLQPGKMSD
VSPVVAAQQQQQQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAAVPRLRPPH
DNRTMVEIIADHPAELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGEVPDGTVVTVM
AGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAI
KVTVDGPREPRRHRQKLDDSKPSLFSDRLSDLGRIPHPSMRVGVPPQNPRPSLNSAPSPF
NPQGQSQITDPRQAQSSPPWSYDQSYPSYLSQMTSPSIHSTTPLSSTRGTGLPAITDVPR
RISDSEPSTLDSQSSTTLFLSSEEPGPSTAALPSPSSSCEPQAFSPSPTMLPSLLPPLST
PSTAPGPCIPRRTGLYTIVTSSPEAAPHLVDWLPSCPSATSPGVQGKDRERPQPVLAPAP
ASERGHSQHPGSARGDHAEDPKVPPPPCAPAATAATLEANVGDILVELRTMNGHLDIIAK
ALTKLASSLVPPSQPVPEAPDTN
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcttcattcgcctcacaaacaaccacagaaccacaagtgcggtgcaagctttctccag
gaggacagcaacaagtctctggttcttaaatggttaatctccgcaggtcactaccagcca
ccgagagcaagcgagtcagtgagtgccctaaccacagtctatgcagtaatatctaaggct
gcaagcagtatttaccacagagggcaccagctctatctggaaggaaagggaaggactatg
gcatccaacagcctcttcagcacagtgacagcatgccagcagaacttcttctgggatccg
agcaccagccggcgcttcagccccccctccagcagcctgcagcccggcaagatgagcgac
gtgagcccggtggtagctgcgcagcagcaacagcagcagcaacagcagcagcagcaacag
caacagcagcagcagcagcagcagcaacagcagcagcagcaggaggcggccgcagcggcg
gcggcggcggcggcggcagcagcagcggcagcggcagtgccccggttgaggccgccgcac
gacaatcgcaccatggtggagatcatcgccgaccacccggccgaactggtccgcaccgac
agccccaacttcctgtgctctgtgctgccctcgcactggcggtgcaacaagaccctgccc
gtggccttcaaggtggtagccctcggagaggtaccagatgggactgtggttactgtcatg
gcggggaatgatgagaactattctgctgagctccgaaatgcctctgctgtcatgaaaaac
caagtagcaaggttcaacgatctgagattcgtgggccggagtggacgaggcaagagtttc
accttgaccataacggtcttcacaaaccctccccaagtggccacttatcacagagctatt
aaagtgacagtggacggtccccgggagccaagaaggcacagacagaagcttgatgactct
aaacctagtttgttctctgaccgcctcagtgatttagggcgcatccctcatcccagtatg
agagtaggtgtcccgcctcagaacccacggccctccctgaactctgcaccaagtcctttt
aatccacaaggacagagtcagattacagatcccaggcaggcccagtcttccccgccgtgg
tcctacgaccagtcctacccctcatacctgagccagatgacgtccccatccatccactcc
accacgccgttgtcttccacacggggcactgggctacccgccatcaccgacgtgcccagg
cgcatttcagattcagagcccagtaccttggactcacagtcgtccaccaccctcttcctg
tcctcggaggagccgggcccctctacagcagccctgccgtctccatcctcctcctgtgag
ccccaggccttctcccccagccccaccatgttaccctctctcctgccacccctgtccact
ccctctacagccccgggcccctgcatccctcgacgcacggggctctacaccatcgtcacc
tcctccccagaggccgcaccccaccttgttgactggctgcccagctgcccctctgccacc
tctcctggtgtccaaggcaaggatcgtgagcggccacagcctgtgttggccccggctcca
gcttccgagaggggccacagtcagcacccaggctctgccaggggtgatcatgctgaggat
cctaaagtccctccacctccctgtgcccctgcagccaccgctgccaccttggaggccaat
gttggggacatcctggtagagcttcggacaatgaacggtcacctggacatcatagcgaag
gccctcactaaactggcctcttctctggtacccccgtcccagcctgtgcctgaagcacca
gataccaattga
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integrated database retrieval system
