Pecten maximus (king scallop): 117316124
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Entry
117316124 CDS
T07399
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1-like
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmax03036
]
117316124
03400 DNA repair and recombination proteins [BR:
pmax03400
]
117316124
Chromosome and associated proteins [BR:
pmax03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
117316124
DNA repair and recombination proteins [BR:
pmax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
117316124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMCHD1_S5
HATPase_c_3
SMC_hinge
HATPase_c
Motif
Other DBs
NCBI-GeneID:
117316124
NCBI-ProteinID:
XP_033726515
LinkDB
All DBs
Position
18:6969606..7039527
Genome browser
AA seq
2045 aa
AA seq
DB search
MATSRRSVGNTSAQLEDDDAFVYVFDRRDSDVPEIKIPTGGLFTYVDFKARVREALEIKK
SESFVIATTNREEIKDDDSWDIIDKGDTLYILRNIQQELCAPAQQRVSYLPHYDTIVKGG
MYEYYASEGQNPLPYAFAELIDNALAATSNNLGSRSIEIRLHIDDGNPSKNCVYVIDNGK
GMTPRQLNNWAIYRLSKFIRKDKRGKVSFGGDEDDDKKLPQSSTHTPLSLNSDISYFGVG
GKQAIFFIGNSTRMITKPQESKDVHELTISKEEFQLKEKNQEAIYSGYIRNRQPGDSSHI
VAEDDILGKIIEEEKDREHFTVVEIHGINPQHMAYLKLHMKQWTRQLAHIYHYYIHGPRG
NADTDDVNTGRIPSPFKNIDIEVKLFTKGHPQPRIVNLRDVDDDMQTQFIRTAASSFEFK
ANIEGSGVVEGVLRYHPFLYDRETYPSDANDPRIEPDAFDEHDYAINDRPARGRRPVFEC
YWNGRLIPYTFIENFDWCAEPKKSRTLPLECYNRISGVLFTNDHFQVSTNKLTFIDLEMR
LREKNTVYSHLVHGQERRTAIDREFVTWLKECHDQCDKQIRFSHFKGVVTRHDLPKHKQY
PWSVYEQVDWDGRAFKKGQLVRIQRTVPMLLGTIKRFLLYGENENDVYATGGDIEVSQEP
KSLYDEEKIVPLSKLDRTCSSQAVRKHIDDEEAKLPSTLIVNWPEGYEVKQNEKRPAGKT
VGDIKVQIANKKGELISKLPGTAVVSKKLLVELKVVWHSSSGDEVMVSHISQHGKNWPYW
FRKMENIKNLGPHTLSLQVVLNESGANTYAGKQLPSHKIKFQVTEAEPEKFTVGMLDGPF
RVGVPFQIPLEFQDEFNNHSKPSIKFSPQLEASGLELSYDSIQIKGFNLIIKGIVAKGSV
AGSAGKSFIMTIKVPGLEQDSQTLKIRLLPGPPHSLFVDCKEGLEIENGKALAFSVEVRD
QADNPTSDAKLVITCKFTGAFGLPVYTLDCSGSGTGTLTGDPINLKQIRNFQKLTAMIEL
QNHKQMGILTRTIKVLPSNRVASIEVRMQNEDGKINTLKSGSLSGRAGDHITNISFSLFD
EGGRKLEIDEKLAGKIKVNWVQKVPRDTVMEGLLPDIKVPATIQDAKYCQVTVQDSNIDF
NFTVTPTPTEPSQINCKCSGSNKVRIGETLDAPILVTIKDKFGNEITDLPKNTSQEVQVS
GDGLRSNEVKVTYSKGKFSIQSVTLEGGKTGTRDLKVTWKDFLDFVKLELTAGPPTKLSL
PGWEEDETVTVLNENKLPRPLIVQLLDDGDNEVHIPDIKIQLAKDPKIKFVPYLMPRKSN
ASGQVDFGTVTVVGQRGSYELEPRAFVSGETISGPKLTILIQPDMTRPVEMKVEYNKKAL
FQVGEMMPEFTIRILAEDEQPMKGAKAASLSMKLWKMDVRTQNTPPSRAVSFSPESVKQN
PGVFIFKERKIPEMSGIHNIMLTYYDGRYELFSNVITVDVKPGAPVRLGSMEQPGTPTVS
NTHNAAARCVIRSLKIDLRDEFDNTAGLGYSGKINLEIMGQPGVVEVPSFVGGNRTLQFT
MNNGQCVLSNLTLAENSAGKDGYEYFLRCIVDCDLIPRNKSIPPLDIPFLFYNDAKKQSQ
MTSLSRQRDDLKAVIKTYKSLFETTEQLVKELKISVHEAQMEENKIREDLRRLKVPLVHL
QNIPSVDKLIEEKSRGREQIRMSKRRTCGLAEAPPDNEILGKIGHLGQIEEVDIARVLSW
HMSADMDCVVTLTNKKAKEIYAQTNGKQQVLPIDSIFKKNLPDWKKPLPHVKYRPNWHPR
GNPIYARNLIIFPQNQEKCKIVFGMLLGDTLILDNLDHANEYRQELVKYTHCPTILTRLG
DRIRSNGKFGGLMNKALSIDKLRGAVFSEPLPSSFHEFANQTELLQNYRVAMEKSGKAKN
ELSEQVAHMKLPEMQEKYKECREAEVELKDVEQKLGVTMTTPRIPASERVKTMRPPPSSD
DGPSASKRPKVTGNPTPQTTIANGSTTPSSASTSSILGTPTRKSGRLASMSPVTSDDGKK
RLRRT
NT seq
6138 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttccaggagaagcgtggggaatacgagtgcacagttagaagatgatgatgca
ttcgtttatgtttttgatcgaagagacagcgacgttcctgaaatcaaaattccaactgga
ggtcttttcacctatgtggatttcaaagcgcgtgttcgtgaagcactcgagataaagaaa
tctgagtctttcgtgatagcaacgaccaacagagaggagattaaagatgacgattcatgg
gatattattgacaaaggagatacactctacatactacgaaatattcagcaggagttatgt
gcccctgcacagcagcgcgtcagttatctaccccattatgatactattgtcaaaggagga
atgtatgaatactacgcctcggaaggacagaatccactcccctatgcatttgctgagttg
attgacaatgctttggctgcaacctcaaataacctgggatctcgctccatagaaatccgc
ctgcacatcgatgacggtaacccaagtaagaattgtgtctatgtcatagacaacgggaaa
ggaatgacgccacgacagctcaacaattgggcgatctacagactctcaaagttcatccgc
aaggacaagcgggggaaagtaagctttggtggggatgaagatgatgataaaaagctacct
cagagttccacgcacaccccactgtccctcaatagtgacatatcctacttcggagtggga
gggaagcaggccatcttctttatagggaattcaacaaggatgataacaaaaccacaggag
tcgaaggacgtccacgaactcactatatcaaaagaggagttccagttgaaggaaaagaac
caggaggccatctatagtggttatatccgaaacagacagcctggagactcatcgcacata
gttgctgaagatgatattcttggaaagataatcgaggaagagaaagaccgagaacacttc
acagtggtcgagatccatgggattaatccacagcacatggcctacctcaaactgcacatg
aaacagtggactcgacagctagctcatatctaccattactacatccacggcccacgggga
aatgcagacacagacgatgtcaatactggacggatacccagtcccttcaaaaacatagat
attgaggtgaagctctttacaaaaggtcatcctcagccgcgcatcgtaaatctgcgggat
gtggacgacgacatgcaaacccagttcatacgtactgcagccagttcctttgagttcaag
gccaacatagaagggtcaggggtcgtagagggagtactaaggtatcatcccttcctgtac
gatagagagacgtatccctccgatgccaatgatcccagaattgaaccggatgcatttgat
gaacatgattatgctatcaacgaccgcccagctagagggagacgcccagtgtttgagtgt
tactggaacggccgacttatcccctacacttttatagagaattttgattggtgtgctgag
ccaaagaagagtagaaccctaccgttggagtgttacaacagaatttcaggtgtgttgttt
acaaacgaccatttccaagtaagcaccaacaaactcacattcattgacctggaaatgagg
ttacgagagaagaacactgtgtattcacatctcgttcatggacaggagagaagaacagct
atagatcgtgagtttgtgacatggctgaaggaatgtcacgatcagtgcgataagcagatt
cgattctcacacttcaaaggtgtggtgacccgccacgaccttcccaaacacaaacaatat
ccctggtcagtctacgagcaggtcgactgggacggcagggccttcaaaaaaggtcaactg
gtgaggatacagaggactgtgccaatgttgctcggtaccatcaagcgttttctactgtac
ggggagaatgaaaatgacgtgtatgcaacaggtggagacattgaggtcagtcaggagccg
aagtccttgtacgatgaggagaaaatcgtgcccttgtctaagcttgatcgtacctgttct
tcacaggctgtccgcaaacacattgacgatgaggaggccaaattaccgtccactctgatc
gtgaactggcccgaggggtacgaggtgaagcagaatgagaaaaggcctgcagggaaaaca
gtgggtgacatcaaagttcagatagctaacaagaaaggagagttgatcagcaaacttcca
gggacagccgtagtatcaaagaaactcctggtagagctcaaggtcgtgtggcactctagc
agcggtgatgaagtcatggtgtcccacatcagtcaacatggcaagaactggccgtactgg
ttcagaaagatggagaacatcaaaaaccttggaccccacactttatccttacaagtggta
ttaaatgagagtggagcaaacacctacgctggcaagcagctcccatctcacaagatcaag
tttcaagtcactgaggcggaaccagagaaattcacagtcggaatgttagatgggccattc
agagttggagttccgttccagattcctctagagtttcaggacgagttcaacaaccacagc
aaaccttccatcaagttttctccacaactggaagccagtgggctcgagttgagttacgac
tcgatacagatcaaagggttcaacttgatcatcaagggaatcgtggccaagggctctgtg
gctggcagtgctggaaagagtttcatcatgaccataaaagtaccggggctggaacaagac
agtcagactctgaagatcaggctgttaccaggtccaccccacagcctatttgtggattgt
aaagaggggctggagatagaaaatggtaaggctctggcattcagcgtggaggtgagagac
caggccgacaaccctaccagtgacgccaaactggtcatcacttgtaagtttactggtgca
tttggattgccagtctacacactagactgctctggcagtggtactggaacactgactggt
gaccccatcaacttaaaacagataagaaacttccagaaactcacagccatgatagagctt
cagaatcacaagcagatgggcattttgacacgaactatcaaagtgttacctagcaaccgt
gttgcaagtattgaggtacggatgcagaatgaggatggcaagataaatacattgaagtct
ggttcactgtcgggtcgagctggagatcatatcaccaatatcagtttctccttattcgat
gaaggtggaagaaaattggaaatagatgaaaaattagcagggaaaataaaagtaaactgg
gtacagaaggttccccgtgatactgtgatggaagggcttctgcccgatatcaaagttccc
gccaccattcaagatgccaagtactgccaagttacagtgcaggactcaaatattgacttc
aatttcactgtaacgcccactcccactgagcccagccagatcaattgtaaatgcagtggt
tccaacaaagttcggattggcgagacattggacgcacctatccttgtcacgatcaaggac
aagtttggcaacgagatcacagatctgcctaaaaatacatctcaagaagttcaagtcagt
ggtgatggtcttcgatcaaatgaggtcaaggtcacatattccaagggaaaattcagtata
caatctgtaacactggaaggaggtaagaccgggactcgggatctgaaagttacgtggaaa
gactttttggatttcgtcaaattagagttaacggctggaccacccacaaagctatcatta
cctggctgggaggaagatgagacagttactgtattgaatgagaacaaactccctcgtccg
ctcatcgtacagttgttggatgatggagacaacgaggtccatatacctgatatcaagata
cagctggccaaagaccccaagattaaatttgtaccatacctgatgccgcggaaatcaaac
gccagtggacaggtagacttcggaactgtgactgtggtgggacagagaggaagctatgaa
ttggaaccaagagcgtttgtttctggtgaaactatcagcggtccaaagctaaccattctc
attcagccggacatgacacggccggtcgagatgaaggtggaatacaacaagaaggcgcta
ttccaggtcggagagatgatgccagagttcaccattcgtatcctggccgaagatgaacag
cccatgaagggagccaaggctgccagcttatccatgaaactctggaaaatggacgtccgt
acccagaacacacctccctccagggcagtgtcattcagcccagaatcagttaaacagaat
ccaggtgttttcatcttcaaagaaaggaagattcccgagatgtctggaatacacaacatt
atgctaacatattacgacggtagatatgagctgttcagcaacgtgataactgtggatgtg
aagcccggtgctccagtgaggctcggatccatggaacagccaggcacacctactgtatca
aacacacacaacgccgcggcacgctgtgttatacgtagtctcaaaatcgacctcagggac
gagtttgacaatacagccggtctagggtacagtggtaaaattaatctggagataatgggt
cagcctggagtggttgaagtaccgtccttcgtcgggggcaacaggacactccagtttact
atgaacaacggccagtgtgtgttatctaatcttactctagccgaaaactccgctggaaaa
gatggctacgagtatttcctccgatgtatagttgactgtgatttgataccccgcaataaa
agtattccacctttggatattccattcctcttctataacgatgccaagaagcagtcccag
atgacgtcgttgtcacggcaacgggatgacctcaaagctgtgataaaaacctacaagtcc
ttgtttgaaacaacagaacaactagtcaaggagctcaaaatatctgtacatgaggcacag
atggaagaaaacaagataagggaagatctcagaaggctaaaggttcctcttgtccatcta
cagaacataccaagtgttgacaaacttatagaagagaaatcccgtggtcgtgaacaaatt
cggatgtcgaaacggagaacttgtggtcttgcagaagctccaccagacaacgagatcctt
ggcaagattgggcaccttggtcagatagaggaagtagacattgctcgggtgttgtcttgg
catatgtctgcagatatggactgtgttgttacacttacaaacaaaaaggctaaagaaata
tatgcacagaccaatggcaagcagcaagttttaccgatcgactcaatatttaagaaaaat
cttccagattggaaaaaacctttacctcatgtgaaatacagacccaactggcatcctcgt
ggtaaccccatctacgccaggaatctcatcatatttccacagaatcaagaaaagtgcaag
atagtgtttggcatgctgctgggtgacaccttaattctcgacaaccttgaccatgccaat
gaatacagacaagagcttgtgaaatatacacactgcccaacgatcctgactcgtctcggc
gaccgcatacgtagcaatgggaagtttggaggtctcatgaacaaagctctatctatagac
aagctacgaggggcagtgtttagtgagcctctgccgtcttcctttcatgaatttgccaac
caaacagaattgctccagaactatcgtgtggcgatggaaaagtcggggaaggcgaaaaac
gaactttcagaacaggtggctcacatgaagctgccagaaatgcaggagaaatataaagag
tgtcgggaggcggaggtcgaacttaaagatgtcgaacagaagctaggggtgacaatgact
acaccaagaatcccagcatcagaaagagtcaagacgatgcgtccaccaccgagctccgac
gatggcccatcagcgtccaaacggcccaaagtgacgggtaacccaacaccacaaacaaca
attgctaatggtagcaccactccgagctctgcatccacctccagtattctcggcacacca
acaagaaaaagtggccgactagcgtccatgtccccagttacatctgacgacggcaagaaa
cgattacgacggacgtag
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integrated database retrieval system
