Pecten maximus (king scallop): 117326909
Help
Entry
117326909 CDS
T07399
Name
(RefSeq) probable E3 ubiquitin ligase complex SCF subunit sconB
KO
K10260
F-box and WD-40 domain protein 7
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117326909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmax04131
]
117326909
04121 Ubiquitin system [BR:
pmax04121
]
117326909
Membrane trafficking [BR:
pmax04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
117326909
Ubiquitin system [BR:
pmax04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117326909
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
WDR55
WD40_Gbeta
Beta-prop_SCAP
DSE1_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
ASA1
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
PEP5_VPS11_N
WD40_like
CFAP251_N
F-box-like
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_Aladin
Beta-prop_DCAF12
ANAPC4_WD40
F-box
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_Vps41
WD40_RFWD3
WD40_CFAP43
DUF4508
Beta-prop_ACSF4
DUF3394
DUF8740
Motif
Other DBs
NCBI-GeneID:
117326909
NCBI-ProteinID:
XP_033739601
LinkDB
All DBs
Position
5:4162986..4214176
Genome browser
AA seq
886 aa
AA seq
DB search
MNAVAERPPIVAAAGRKGHLSPQRDGKNVRRRPEGEDDERRVLDWRGHGGRHPTQSSVEF
DRQLDKISMWMENWSHSQRCQLMENLLRRSGHNQFQFLYTVMQPNVHRDFIYNAKSHFPG
MDFKSVSTPAMRDAQRRLKLYRQDNYFREKSAHLKDDSQVTHLAEEQNEMGLRLPQIPSG
AKLNTDKGTDLSVLNFKSKHKKKGASFPKIITSNTLPKNHKNKPKAVVSVVNSEDMTAVN
ASAPVLRFIDMPIRRHIQDEGNMRYLGSSLSSLPVSTRYTLESSVSFVNDDQNQPQKKKK
KNVLDEEAWSVIHWYLEEWSDVRKNEFLHKFLLKLDPRQHYFISSFLSMRHYRDFLTMLP
EHISLKILNYMTPEKIHKCTLVSKAWYALANSNKLWGWKCEEVEILVPIPSNPCWKHIYR
DNMHLKMNWNSGSCRTLDLKGHTDTVEAVTFNHRLFASGSQDKTIRIWDIKTGRPLQVLK
GHEKGVWCLNFFTETLLVSGSYDGTIKVWNLRTGSTVRTLLAHDGPVWAMVRHNNILVTA
SQDKTAKIWDISRCYLIHNLYGHTEAVFAVDLSEDGSLTITGSADRTLRIWDTQTGVQKK
MIWVSQSTSIMAVSYSKGYVACSYGETICLYRLERPKLMKTYEEHEKRIETLELQMKDTK
EVTGTIISAGQDGMVKYWDIQKNASIRTFKGHVGSVKSIRFDELRIATGAKDKIRIWDFT
YQEKKETRNKSVDDESLVSKSPSKDVHGTSAGSNQGKEFPGTPNPIKIKVLHGTPANTPR
EKEKSSGSPRGKDAHRNIGNSKGSKETNSKGSKETNPKGSKENNPKGPKETNPKGSKENS
DIQTTEQVKDGHRTVQSPRESKEIPEVPTQTMRVRTVLPEVIVTES
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctgtagcagaaaggccgccaatagttgcagcggctggaaggaaggggcatctg
tcaccccagagggacgggaagaatgtgaggaggaggcccgagggtgaggatgatgaacga
cgggtgttggactggaggggccacgggggaaggcaccctacccaaagtagtgtggaattt
gacaggcagttggataagatttcaatgtggatggaaaattggagccattctcagcgatgt
cagttgatggagaatctactgaggcggagcggccataaccagttccagttcctctatacc
gtgatgcagccaaatgtccatcgtgattttatctacaatgccaaaagtcactttcctgga
atggactttaagtctgtcagtacgccagccatgagagatgcacagaggaggctgaaactg
tatcggcaggacaactactttagggagaaaagtgcccacctgaaggacgattctcaggtg
actcacctagccgaggaacaaaacgagatggggctgaggctcccccagatccctagtggg
gccaaactcaacacagacaaagggacagacctgagtgttctcaactttaaatccaaacat
aaaaagaaaggagcaagctttccgaaaatcatcacatccaacactttacctaaaaatcac
aaaaacaaacctaaggcagttgtgtcggttgttaactctgaagacatgacggctgtcaat
gccagtgctcctgtactaagatttattgacatgccaatccgtcgacacatccaagatgaa
ggaaacatgcggtacctcggttcatcactaagttccctcccggtatctacccgctacact
ctggagtcctccgtcagcttcgtcaacgatgatcaaaaccagcctcagaaaaagaaaaag
aagaatgtgctagatgaggaggcttggtctgtgatacactggtacctggaggagtggtca
gatgtcagaaagaatgaatttctccacaaatttctccttaagctcgatcctcgtcaacac
tatttcatatccagctttttatcgatgcgacattatcgagatttccttaccatgttaccg
gagcacatatctttgaagatattgaactacatgacacctgaaaaaatacacaagtgcact
ttggtgagtaaggcctggtatgctctggcgaattctaacaagctgtggggctggaagtgt
gaggaagttgaaatcctggtaccaattccttcaaatccttgctggaaacatatctacagg
gacaacatgcacctaaagatgaactggaacagtggatcctgtcgcacacttgaccttaag
ggccacacggacacagttgaggcggtgaccttcaaccatcggttatttgccagtggtagt
caggacaaaaccatccgaatctgggacatcaagactggacgtccccttcaagtccttaag
ggccatgaaaaaggggtgtggtgccttaacttcttcacagagaccctactggtcagcggg
tcgtacgacggaacaattaaggtatggaaccttcggacggggagcactgttcggacctta
cttgcccatgatggtccagtgtgggctatggtcagacacaacaacatcctagtgaccgct
tctcaggacaaaactgccaaaatctgggacatatctcgatgttacctaattcacaacctg
tatggccacactgaagctgtgttcgctgtcgatctaagtgaggatggctccctcaccata
acgggctcggctgacagaacgctgcgtatctgggacacacagacaggtgtacagaagaag
atgatttgggtgagccagagtacctccatcatggccgtcagctacagtaagggttacgtg
gcctgtagttacggcgagacgatatgtctgtacagactcgaacggccgaaactgatgaag
acatatgaagaacatgaaaaaaggatagagactcttgagctacagatgaaggacacgaag
gaagtgaccggtactataatcagtgctggtcaagatgggatggtcaagtactgggatata
cagaagaacgcaagtattcgtactttcaagggtcacgtgggatcggtgaaaagtattcga
tttgatgagctacgaatagcaactggtgcaaaggacaaaatcagaatttgggatttcaca
tatcaggaaaagaaagagacgaggaacaaaagtgtcgatgatgaaagtcttgtctccaaa
tccccctccaaagatgttcatgggacttctgcaggttccaaccaaggaaaggagtttcca
gggactccgaatcccataaaaatcaaggttctccatggaacacctgcaaacacccctaga
gaaaaagaaaaatcatctggttctcctagaggaaaggacgctcacagaaatattgggaat
tccaaaggatctaaagaaactaattctaaaggatctaaagaaactaatcctaaaggatct
aaagaaaataatcctaaaggacctaaagaaactaatcctaaaggatcaaaagaaaattca
gatatacagacaacagaacaggttaaagatggacacagaactgttcagagtccgagagaa
tctaaagaaatacccgaagtcccaacacagacaatgagagttagaactgttcttccagag
gtcatagtgaccgagagttga
DBGET
integrated database retrieval system
