Pecten maximus (king scallop): 117337665
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Entry
117337665 CDS
T07399
Name
(RefSeq) interferon regulatory factor 8-like isoform X1
KO
K09446
interferon regulatory factor 5
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117337665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmax03000
]
117337665
Transcription factors [BR:
pmax03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
117337665
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IRF
IRF-3
MH2
cPLA2_C2
Motif
Other DBs
NCBI-GeneID:
117337665
NCBI-ProteinID:
XP_033754650
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Position
11:complement(18989407..19010018)
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AA seq
468 aa
AA seq
DB search
METKSPPSSSQHREHLVVMETPSRQRLRPWLEAKINSKTIPGLYWLDNSQQIFRVPWKHG
GKHDWHEEDSMIFKEWAIHTGRYREGVDTADWPTWKTRFRCALNKLPDIMEVKEKSSLDG
AEPYRAYKFIPRRDSRQIRSPPVPIQQYTAPPELERPVEIPLRHDDDTLLHEIDLNYFNE
VTNMETDNYADIQQNGHPSQFHTHVVVPTTVREDAPVSPAMGELVPVQTSTHFVSNHADP
GPQQPEPPDYEMDLKMMYRHLDVYQSTCVNPTGCRLFYGQDPDLIDGLQQAMFGPDGLEH
ICFPPCAQILRNQKQVTLTNQLLNALDRGIILECESGSIYATRKCKCVVFVSSPSFNDGK
PTKLQRDVKTLIFHYQEYFEPMLIRYLTGLSNKPSPEVLFGFGQNWRPNDQPLSNLLIAA
VVGCSKARHKISQISFVSPESMPMEVSKSDDLDKYLNYAKIQQCVNDN
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggaaactaaatctccacctagctcttctcaacatagggaacatcttgttgttatggaa
acacctagtcgccaacggttacgcccctggcttgaggccaagatcaattctaaaacgatc
cctggactgtattggctcgacaattcccaacagatattcagggtaccttggaaacatgga
ggaaaacatgactggcatgaagaggactcgatgatctttaaggagtgggccatccacacg
ggacgctatcgagagggagtagataccgctgattggcccacctggaaaacgcgcttcagg
tgtgccctcaacaaactacctgacatcatggaagttaaagaaaaaagttccctggatgga
gcagagccttacagggcctacaaattcattcctaggagagattcaagacagataagaagt
ccaccagtgcccatacaacagtacacagctccaccagagctggaacgaccggtagagata
cctttacgacatgatgatgatactcttttgcatgaaattgaccttaactacttcaatgaa
gtcaccaatatggaaacagacaattatgctgacattcaacaaaatggtcatcccagtcag
tttcatacccatgttgttgtcccaaccactgtaagagaggatgccccagtatctccagcc
atgggagagcttgtcccagtccagacaagcacacattttgtctcaaaccatgcagaccca
ggtcctcaacagccagagccaccagattatgaaatggatctcaagatgatgtatcgccac
ttggacgtgtatcagtccacctgtgttaaccccacaggttgtcgcctcttctatggccaa
gatcctgatcttattgatggacttcagcaggctatgtttgggccagacggactggagcat
atatgtttccctccatgtgcccagatattaagaaaccagaaacaagtgacattgaccaat
cagctgctgaacgcccttgaccgaggaatcatcctggaatgtgagagtggcagtatatat
gccaccaggaagtgcaagtgtgttgtgtttgtttcctcgccatcttttaatgatggtaag
cctaccaaactccagcgcgatgtaaaaaccctcatcttccattaccaggagtattttgaa
ccaatgttaatccgctatctcactggcctctccaacaaaccctctcctgaagttttgttt
ggatttggccagaactggcgaccaaacgaccagcctctgagtaatctactgatagcagct
gtagttggctgtagtaaagccaggcataagatatcacagatcagctttgtgagtcccgaa
tcaatgccaatggaagtatccaaatctgatgacctggacaagtatttgaattatgccaaa
atacagcagtgtgtaaatgataactga
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