Pseudoalteromonas maricaloris DSM 15914: R5H13_03895
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Entry
R5H13_03895 CDS
T09524
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pmaz
Pseudoalteromonas maricaloris DSM 15914
Pathway
pmaz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R5H13_03895 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmaz03400
]
R5H13_03895 (nth)
Enzymes [BR:
pmaz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
R5H13_03895 (nth)
DNA repair and recombination proteins [BR:
pmaz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
R5H13_03895 (nth)
Prokaryotic type
R5H13_03895 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WOX29426
UniProt:
A0A8I2H7B4
LinkDB
All DBs
Position
1:complement(920857..921492)
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AA seq
211 aa
AA seq
DB search
MNKQKRIEILTRLRDENPHPETELEYSSPFELLVAVTLSAQATDVGVNKATRKLFPVANT
PEKILELGLEGLRDYIKTIGLFNSKANNVYKMCQILVDKHGSEVPENREALEALPGVGRK
TANVVLNCAFGWPTIAVDTHIFRVSNRTKFAMGKDVVAVEQKLEKVVPKEFKVDVHHWLI
LHGRYVCTARKPKCGSCIIEDLCEFKEKTDS
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacaaaaacgtatagaaatactcacgcgacttagggacgaaaatccgcaccca
gaaactgagctagaatactcgtcaccattcgagcttttagttgccgttaccctctcagca
caagccactgatgttggagtgaacaaagcaacgcgcaaactcttccctgttgccaacaca
ccagaaaagatccttgagcttggccttgaaggcttaagagactatatcaaaaccattggt
ttatttaattcaaaagccaataacgtctataaaatgtgtcagatcctcgtcgacaaacac
ggctccgaagttcctgaaaaccgtgaagcactagaagcactgccgggggtcggtcgcaaa
accgccaacgtggtactaaactgcgcttttggctggccgacaattgccgtagacacccat
atattccgcgtctccaatcgcaccaagtttgccatgggtaaagatgtggtggcagtcgag
caaaagctagaaaaggttgtaccaaaagaatttaaagtggatgtccaccactggctcatt
ctccatggccgctatgtgtgcaccgcgcgtaaacctaaatgtggcagctgtattattgaa
gacttatgtgagtttaaagagaagactgatagttaa
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