Pseudoalteromonas maricaloris DSM 15914: R5H13_08805
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Entry
R5H13_08805 CDS
T09524
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pmaz
Pseudoalteromonas maricaloris DSM 15914
Pathway
pmaz01501
beta-Lactam resistance
pmaz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pmaz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
R5H13_08805
01503 Cationic antimicrobial peptide (CAMP) resistance
R5H13_08805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmaz03036
]
R5H13_08805
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmaz02000
]
R5H13_08805
01504 Antimicrobial resistance genes [BR:
pmaz01504
]
R5H13_08805
Chromosome and associated proteins [BR:
pmaz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
R5H13_08805
Transporters [BR:
pmaz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
R5H13_08805
Antimicrobial resistance genes [BR:
pmaz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
R5H13_08805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
CusB_dom_1
Biotin_lipoyl
DUF7507
DUF4616
THOC7
PMEI
DUF3945
Motif
Other DBs
NCBI-ProteinID:
WOX30340
LinkDB
All DBs
Position
1:complement(2021712..2022884)
Genome browser
AA seq
390 aa
AA seq
DB search
MYPASIRSRVKHLSFLMLTLGTLSACSEAPQQGGHAMPPAQVSVQQVTTQSVPFDIELPA
TLAGDKEVEIRSRVSGIIESRNFEEGQFVKAGHSLFTIELKPFELAVDKAQAALQAAKAN
VDQTKRESERLERLKNERSVSKRDFDNSVSAYDIAVANLESAKVALSEAKLDLEYAKVEA
PVSGIVGRELMSEGSYVSGPSVLLTELTDISTIRARFGFSEREQLTMRQDVENGSLSLPA
HNEFDTTIILQDGSLYGQAGKVNFSDVRVNRFTGTSELQARIPNENGELRPGQFVRVKLS
GAVRNNAIVLPQRAVLDNGTGKFVYIATKNEQGATVALPAPVKVGEWVKLNNENMWVIRE
GLKEGQPVIVEGMARIFFPGMPVSVSEQGE
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtatccagcatcaatacgcagtcgtgttaaacacctatcttttttaatgctcacgtta
ggcactttgtcagcgtgttcagaagcaccacagcaagggggccacgcaatgccgcctgcg
caagtgagtgtacaacaagttactactcaatcagtgccattcgatatcgaacttccagcg
accctcgcgggtgataaggaagtagaaattcgctctcgagtttctgggataatcgaatct
cgcaactttgaggaaggtcagtttgtaaaagctggtcattcactattcaccatcgaactt
aaaccttttgaattagcggtagacaaagcgcaggcagcacttcaggcagcaaaagcaaac
gttgatcaaactaagcgcgagagcgaaaggcttgagcgtttgaagaatgagcgttcggta
tcaaagcgcgactttgataactcagtatcggcctacgatattgcagttgcgaatttagaa
tctgcaaaagtcgcattgagtgaagccaaattagaccttgaatacgccaaagttgaagcg
ccagtttctggtatcgtgggtcgtgagctaatgtcagaaggcagttatgtttccggtccg
agtgtactattaactgaacttactgacatcagcactattcgtgctcgcttcggcttttca
gagcgtgagcagctaacaatgcgccaagatgtagaaaatggctcattgtcattaccagct
cataatgaatttgataccacgattattctgcaagacggttcactctatggacaagccggt
aaagtaaactttagcgacgttagggtaaatcgctttacgggtactagtgagttacaagct
cgtattcctaatgaaaacggcgagctgagaccgggtcaatttgttcgagttaagctctct
ggtgcagtacgcaataacgctattgtgcttccgcaaagagcagtactagacaatggtacg
gggaaatttgtgtacattgctaccaaaaatgaacaaggtgcaaccgtagccctgcccgca
ccggttaaagttggtgaatgggtcaagcttaataatgaaaatatgtgggttattcgcgaa
ggcttaaaagaaggtcaacctgtcatcgttgaaggtatggcgaggatcttcttccctggt
atgccagtgtctgtgagcgagcaaggagaataa
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