Pseudoalteromonas maricaloris DSM 15914: R5H13_17955
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Entry
R5H13_17955 CDS
T09524
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pmaz
Pseudoalteromonas maricaloris DSM 15914
Pathway
pmaz01501
beta-Lactam resistance
pmaz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pmaz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
R5H13_17955
01503 Cationic antimicrobial peptide (CAMP) resistance
R5H13_17955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmaz03036
]
R5H13_17955
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmaz02000
]
R5H13_17955
01504 Antimicrobial resistance genes [BR:
pmaz01504
]
R5H13_17955
Chromosome and associated proteins [BR:
pmaz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
R5H13_17955
Transporters [BR:
pmaz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
R5H13_17955
Antimicrobial resistance genes [BR:
pmaz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
R5H13_17955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
Peptidase_M23
PTS_EIIA_1
FAA_hydro_N_2
Adhesin_P1_N
Motif
Other DBs
NCBI-ProteinID:
WOX28480
LinkDB
All DBs
Position
1:complement(4010720..4011766)
Genome browser
AA seq
348 aa
AA seq
DB search
MSRNKIFIPVLAIFCLLLMVVWLAGGFQNKLAPGNKSELPAYQGARYTVQKSLIAMIEQV
PASVVAKENTLVSSRLLAELKTLNVRAGDKVTAGQLIATLDDAELKAELQRVAAQQAANS
AKLEQATKQLVRNKSLNEKGLIAINQVDEWQATVNELQAQDKALQEAYRSAEVALGYTQI
TAPISGKVVARLQEPGSMVSPGGAIISLFNPLQLQIEAPIRESQVKHIQLGSEIKVRIPA
LDISQTARVSEMVPIADSQARSFIIKLDMPLLKNVVPGMYALVELVLGEQAVIQIPTNMI
SKYGQLAMVEVIESGQLHKRYLRLGEETGNKTIVISGLNEGDQLAVQR
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtaataaaatctttattcctgttcttgctattttttgcctattattgatggtc
gtatggcttgctggtggattccaaaataagctagctccgggcaataagtccgaacttccc
gcctatcaaggagcacgttataccgtgcaaaagtcgctgattgcgatgattgaacaagtc
cccgcgagtgtggtcgcaaaagaaaatacgttagtgtccagtcggttgttggcggagctt
aaaacgcttaacgtcagagccggtgataaagtcactgcgggacagctgatagcaacactc
gatgatgcagagcttaaagcagagctgcaaagagtggcagcgcagcaagcggcgaattca
gctaagctagagcaagcaactaagcagttagtacgcaataaatctcttaatgaaaaaggg
cttatcgcgattaaccaagtggatgagtggcaagccacagtgaacgagttacaagcgcaa
gataaggcattgcaagaagcgtatcgtagtgctgaagtcgcgctgggttacacgcaaatc
acagcccctatttcgggtaaagtggtagcgcgcttacaagagccgggcagcatggttagc
cccggtggcgccattatttcgctattcaatccgttacaattgcagattgaagcgccaatt
cgcgagagccaagttaagcatattcagttaggaagcgagattaaggtgcgcatacctgcg
ctagacataagccaaaccgcgcgtgtgtcggaaatggtgccaattgccgacagccaagcg
cgcagctttattattaaattggatatgcctttgctgaaaaatgtggtgcctggcatgtac
gcgctggttgagcttgtgcttggcgagcaggcggttatccaaattccaactaatatgatc
agcaagtatggtcaattggcgatggttgaagtaatagaaagtggccagcttcacaaacgc
tatctcaggttgggcgaagagactggtaataaaacgattgttatcagtggcctaaacgaa
ggcgatcagctagctgtgcagcgatag
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