Glacieibacterium megasporae: KTC28_06135
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Entry
KTC28_06135 CDS
T08573
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pmea
Glacieibacterium megasporae
Pathway
pmea03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KTC28_06135 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmea03400
]
KTC28_06135 (nth)
Enzymes [BR:
pmea01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KTC28_06135 (nth)
DNA repair and recombination proteins [BR:
pmea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KTC28_06135 (nth)
Prokaryotic type
KTC28_06135 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
UAJ11276
LinkDB
All DBs
Position
complement(1312328..1312969)
Genome browser
AA seq
213 aa
AA seq
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MSPEDVETLFARLSAGNPAPTTELDYANPFELLVAVVLSAQSTDIGVNRATKGLFAAAST
PEMMVALGEDEIRNHIRTIGLFNTKAKNVLALSAALIANHKGEVPHDRAALEALPGVGRK
TANVILNEIFGDETCAVDTHIFRVANRTGLAPGATPRAVEDGLMAVIPAAYRRHAHHWLL
LHGRYVCLARKPECWRCIVFEVCAYLPKTRLSS
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgagtccggaggatgttgagacgctgtttgcgcggctgagcgcgggcaaccccgccccg
acgaccgagctcgactatgctaacccgttcgagttgctcgtcgccgtcgtcctgtcggca
caatcgaccgacatcggcgtcaatcgcgcgaccaagggcctgttcgccgccgccagcacc
ccggaaatgatggtcgccctcggcgaggacgaaattcgtaaccacatccgcacgatcggc
ctgttcaacaccaaggcaaagaacgtgttagcactgagcgccgcgctcatcgcgaaccat
aagggcgaggtcccccacgatcgcgccgcgctcgaagccctcccaggagtcggccgaaag
accgccaacgtcatcctcaacgagattttcggcgacgagacctgcgccgtcgacacccac
atctttcgtgtggcaaatcgcaccggcctcgcgcccggtgccacgccccgcgctgtcgag
gacgggcttatggcagtcattccagctgcttacagacgccacgcacatcactggctgttg
ctgcatggccgctacgtctgcctcgcgcgaaagccggagtgctggcgatgcatcgttttc
gaagtctgtgcgtatttgccaaagacgcgtctctcatcctga
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