Polymorphobacter megasporae: KTC28_12045
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Entry
KTC28_12045 CDS
T08573
Symbol
ligA
Name
(GenBank) protocatechuate 4,5-dioxygenase subunit alpha
KO
K04100
protocatechuate 4,5-dioxygenase, alpha chain [EC:
1.13.11.8
]
Organism
pmea
Polymorphobacter megasporae
Pathway
pmea00362
Benzoate degradation
pmea00624
Polycyclic aromatic hydrocarbon degradation
pmea00627
Aminobenzoate degradation
pmea01100
Metabolic pathways
pmea01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pmea00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
KTC28_12045 (ligA)
00627 Aminobenzoate degradation
KTC28_12045 (ligA)
00624 Polycyclic aromatic hydrocarbon degradation
KTC28_12045 (ligA)
Enzymes [BR:
pmea01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
KTC28_12045 (ligA)
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Motif
Pfam:
LigA
Msb1-Mug8_dom
Motif
Other DBs
NCBI-ProteinID:
UAJ09078
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Position
complement(2577794..2578210)
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AA seq
138 aa
AA seq
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MDGSSPQGPGYDAADLADIPGTTIFTTASSRRAYQLHRFCMSLMKVENRAAFKADEGAYL
DRFAMTPEQRQGVVDRDFNRLIGLGGNIYFLVKISNTDGWSVQRAVGTMAGMSGEDYAAM
MIAGGRSPVGNRSIAGRH
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atggacggttcttcgccgcagggcccgggatacgatgccgccgatctggcggatattccg
ggcacgacgatcttcaccacggcaagctcgcggcgggcgtaccagctccaccgcttctgc
atgtcgctgatgaaggtggagaaccgcgccgcgttcaaggccgacgagggcgcttacctc
gaccgcttcgcgatgacgcctgagcagcgccaaggggtcgtcgaccgcgacttcaaccgc
ctgatcgggctcggcggcaacatctacttcctcgtcaagatctcgaacaccgatggctgg
agcgtccagcgcgcggttggcacgatggccgggatgagcggcgaggattatgcagcaatg
atgatcgccgggggccgctcaccggtcggcaaccgctcgatcgccgggaggcactga
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