Polyergus mexicanus: 138936896
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Entry
138936896 CDS
T10742
Name
(RefSeq) LOW QUALITY PROTEIN: otoferlin
KO
K19949
otoferlin
Organism
pmec Polyergus mexicanus
Brite
Membrane trafficking [BR:
pmec04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
138936896
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138936896
NCBI-ProteinID:
XP_070158785
LinkDB
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Position
Unknown
AA seq
1698 aa
AA seq
DB search
MHTETNKRQFKQMRITFGAWPISAIDFAGCAMPFKKFRSKFSIYQVCVTILEAKHLPQNA
NPLVVVKVGNRKRRTVVRERTDNPVYNEYFVFDLTCSLDNLLSTRITIAVYLRNFLRQLK
FHGSVSFEVATVWEQPDRQYYHKWAVLTDPKNSSAGPKGYVKCNITVNAKGEKVKVHPET
EGEEDIEGNLLLPIGSEKLSFGQRARYIFIVYRADGLPDMSSLCRKSDFENINPYVQISF
AGMKGSTSEEWQTYSPRFHEVIIFKEMFPVLCHRVRITIKHRIDSCRTCVVAFHILDMAK
ISNSGEYGFLPTYGPSFIHFYGSGSMEKNGCSGRCLTEMPLYRGRVLVSLKTEMDDPEAS
PGIRVETLSAFPIIEKSLWSTEEYLLVGVLYDVCMIDRSRFGSKLISFELSLGNAGNRQF
PHSQCAESDNDGQSENELLKKRPNFESQSVPRATGTLDGRYNYVPLGSRKPCLYVKSWWP
NLEWRMYNSNNLRYIVEFLEIRLEKLEALAITQNPTAFEIYNETIRALKAHCKRYLYVLN
TGKYEKKGGTTKLDRHRASLCLKSVENILERIKINGELPNNNYMRIAMIHAYQYLKKLRK
LSEDPQHNLPDVFVWMIAGSKRVAYSRLSAEEIVHSEEATEAGVKCGRRVSLFPGSPDDE
DETVEYSACKIEVFLWLGNAKYAAACWSAIPPGYEIDHGANVNTFPKYIEYNRSSTFQLR
AHILQGRFDPGMDASGLMDSFVRVTFQGYTASTRVIRQSLDPFWDQTLIFPPIILHGTKE
YIKSAPPEVVLQVFDQDLCGTKEFCGKCIAVPLAKLAVETYSPPDFPPKLQWYKFQSRKD
CTGSALAAFELIEMENKEMLDTVPLNTPVEDKIYSIPPDIRPKMASYRLEVIFWGVRDMR
KINYIPVRRPRIVVECAGIHVKSEVMKNAKRFSNFEEPHIIIELEIPELDIYYPSIAIKA
YDSRGFGCFKYAGICIIPNIHVFLEQLITVEDYDARIYESTFAQKFRLAERQTAIILPLP
IDYSPSKEESKGLIAYKRMAGTDVHSKLKRLFVIIKGILKFKFFTKRKKVEIYGDNGDET
LDWWSKYFASIQEERDRELGMTRTFRRKFVATFKIYSTELEMQPQFEGFQDRLSTFELWR
GRKSENHYRTEDNYVGKFKGHISIYRWPHPDKLPCKTINGRDAANGLCNDYPPQEPVKLL
VRLYVVKGINLQPKDPFSGKSDPYLCVKLGKNSISDRKNYIPNQLNPTFSRVFEIEASFP
QDYMLVIQVWDFDAATADDLIGETRIDIENRFYSRHRAHCGIASVYSTVGYNAWRDSERP
TQILELLCRRNNLPSPEYGEREVKIGKTIFPFHPVIEREDEIDREECMALNVLHSWQDFP
ICGCALVVEHVERRPLFNAKRPGLEQGKLEMWIDMFRIGQLPPKPAISIALPTPEEYEIR
VIVWNTEDVPLVESQFLTGEKCSDIYVKGWILYEDYQKTDIHYNSLTGEGNFNWRFVFRV
TYSKGENAMIVRRRMSVFAKNEIEDKLPCKLHLQVWDSDHFSSDDFLGELTLDLSRMPRG
SSNSKNCTMKLLESQLPIVNLFKVTRTKAWWPFARSIDGGKYIQAGKVELEISVLRAMDA
DDQPAGKGRDPPQDLPSPRRPDTSFSWFHNPWRACRFVVCRYYKWRIVCCFVCTLFVLLV
ACGIYAFPGYFVKRLLGA
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atgcatactgaaacaaacaaacggcaatttaaacaaatgcgaataacatttggcgcgtgg
ccaatatcagcgatcgattttgcgggctgcgcgatgcctttcaagaaattcaggtcaaag
ttctccatttaccaagtttgcgtaactatactcgaagcgaagcacctgccgcaaaatgcg
aatccactggttgtcgttaaagtcgggaatcgcaaaagaagaacggtggtacgcgagaga
accgataatcctgtttataacgagtacttcgtattcgacttgacgtgtagtttggacaat
ctactaagcacgagaatcacgatagcggtgtacttgcggaacttccttcggcaactaaag
tttcatggaagcgtttcctttgaggtcgcaacagtatgggaacagccagatcgacagtac
tatcataaatgggccgtattgacggacccaaaaaactcgtcggcgggcccgaagggctat
gtaaaatgcaatatcactgtgaacgcgaagggtgagaaagttaaggtgcatccagaaaca
gaaggtgaagaggacatcgaagggaatttattgctgcctattggaagcgagaaactgtct
ttcggacaacgcgcacgttatattttcatcgtttatcgcgctgacggattgccagacatg
agcagcttgtgcaggaaaagcgatttcgagaacattaatccatatgtgcaaatatcgttc
gccggaatgaaaggatcgacaagcgaagagtggcaaacctactctccaagattccacgag
gtcatcattttcaaagaaatgtttcctgttctctgccaccgtgtacgaatcactataaag
catcgtatcgacagttgtcggacgtgcgtcgtagcatttcatatcctggacatggcaaag
atttcgaattccggagagtacggattcctgccaacatacggaccttcctttatccacttt
tacggatccggctcaatggagaagaacggttgttcgggcagatgcttgacggaaatgcct
ttgtatcgcgggagggtgcttgtgtcgttgaaaactgaaatggatgacccagaagcgtcc
ccgggaatccgggttgagacactttcggcatttcccattatcgagaaaagcctatggtcg
accgaggaatatcttctggttggcgtgctttatgacgtatgcatgatagatcgttcccga
ttcggatcgaaattgatcagcttcgaattgagtctaggaaacgcgggcaatcgacagttt
ccgcatagccaatgcgctgagagcgataacgacggccaatcagaaaacgagctgctaaaa
aagcgcccgaacttcgagagccaatcagttccgcgagccactggcaccttggacggaaga
tataattatgtacccttgggttctagaaagccttgcttgtacgtaaaatcttggtggcca
aatttggagtggcgaatgtacaatagcaataatctccgatacatcgtcgaatttttggaa
ataagactagagaaattagaggctctcgcgattacgcagaatccgacagctttcgagatt
tacaacgagacgattcgcgcgttgaaagctcactgtaaacgatacctatatgtattgaat
accggcaagtatgaaaagaaaggtggaactacgaaactcgatcgccatcgcgccagcttg
tgtctcaaaagtgtcgagaatattctcgagaggatcaagatcaacggcgagctacccaac
aacaattacatgagaatcgccatgattcacgcgtaccaatatttgaaaaaattgcggaaa
ctatccgaagatcctcagcacaatctgccagacgtctttgtatggatgatcgctggttcg
aagcgagtcgcttactcgcgattgtccgcagaagagatcgttcattccgaggaagctacc
gaagcgggagtaaagtgcggccgacgagtcagcctctttcccggaagtccggacgacgag
gatgagaccgtcgagtatagtgcctgtaaaatcgaagtcttcctgtggctcggtaacgct
aagtacgccgccgcgtgttggagcgcgattccgcctggatacgagatcgatcacggcgcg
aacgtcaatactttcccgaagtatatcgagtacaatcgatcctcgacgttccagttgcga
gctcatatacttcaaggtcgcttcgatcctgggatggacgcttccggtttgatggactcc
ttcgtacgcgtcacttttcagggatacacagcttccacgcgagtgataaggcaaagttta
gatcccttctgggatcagacgttaatttttcccccaattattctgcatggtactaaagaa
tacattaaatcggcaccacccgaagttgtcctgcaggttttcgatcaggatttatgcggt
acgaaggagttctgtggaaaatgtatcgcggtgccattagcgaaactcgcagtggaaact
tattcgccgcccgatttcccaccgaaattacaatggtacaaatttcaatcgcgaaaagat
tgtaccggttcggccctcgccgctttcgagttgatagaaatggaaaacaaggagatgtta
gacaccgttccgttgaacacgccggtggaggataagatttacagcatcccgccggatatc
aggccgaaaatggcgagctacaggctcgaggtgatcttttggggtgttcgcgacatgagg
aagataaattatataccggtgcgcagaccgagaatcgtagtggaatgtgctggcatccac
gtcaagtcagaagtgatgaagaacgcaaagagattcagcaactttgaggaaccgcatatt
ataatcgaactggaaataccggagctcgatatttattatccgagcatcgctataaaggct
tacgattcccgcggattcggctgcttcaaatatgcagggatctgtatcatacccaacatt
cacgtgtttctggagcaattaataaccgtggaggattacgatgcgcggatatacgagtcg
acatttgcgcaaaaattccggctagcggaacgacagacggcaattatattacccttacca
atcgattatagtccttcgaaggaggagagcaagggtcttattgcatataagagaatggct
ggaacggacgtccactctaagctgaagaggctgtttgtaattataaaggggatattaaaa
ttcaaattctttactaagagaaaaaaagtggaaatttacggagataacggtgacgagact
ctcgattggtggagtaaatattttgcttccattcaggaagagagagatagagaattggga
atgacgagaacgtttcgtcgtaaattcgtggcaacgttcaagatctattccacggaacta
gagatgcagccgcaattcgaggggtttcaggatcggctaagtacttttgagttgtggcgc
ggaagaaaaagcgagaatcactatcgtactgaagataattacgttggcaaatttaaggga
catatttccatataccgatggccgcatcctgacaaacttccatgcaaaacgataaacggg
agagacgcggctaatggcctgtgcaacgattatccgcctcaagagcctgttaagctgctc
gttagactctacgtcgtaaagggcatcaacttacagcctaaggatcccttcagcggcaaa
tctgacccgtatctctgcgtgaagctaggaaaaaattccatcagcgacaggaagaattat
attcccaatcaattgaaccctacgttcagccgcgtgttcgagatcgaggccagcttcccg
caagattatatgttagtgattcaagtgtgggactttgatgccgcgacggccgatgatctg
attggcgaaacgcgaatcgacatcgagaatcgattctacagccggcaccgggcccactgc
ggaatcgcgagcgtttacagcaccgtcggctacaatgcctggagggatagcgagagaccg
acacagattctggaacttctttgcagaaggaacaatctaccgtcaccagaatatggtgaa
cgcgaagttaaaattggcaagacgatatttccctttcaccctgtgatcgaacgcgaagac
gagattgacagagaagaatgtatggctctgaatgtgcttcactcttggcaagattttcct
atctgcggatgcgccctggtggtagaacatgtcgagagacggccgcttttcaacgctaaa
aggcccggtctcgagcaaggcaaactcgaaatgtggatcgatatgtttcgtatcggacaa
ttgccgccgaaaccggcgatcagcatcgctcttccgacaccggaggaatatgaaattcgc
gtgatagtttggaataccgaggacgtgccgttggtcgagagccaatttcttaccggggag
aaatgttccgacatttacgttaagggatggattctgtacgaggattatcagaaaaccgac
attcattacaactctctgaccggtgagggtaactttaattggagattcgtgtttcgtgtc
acgtattcgaagggcgagaatgccatgatagttcgcagaagaatgtcggtcttcgctaaa
aacgagatcgaggataaactgccctgtaagcttcatttgcaagtctgggacagcgatcat
ttctcttcggacgattttctaggagagttgacgctcgacttgtcgagaatgccgcgaggc
agctcaaactccaaaaactgtacaatgaaattacttgaatcgcaattgccaatcgtgaat
ttatttaaagttacgcgaactaaagcttggtggccatttgctcgcagtatcgacggcgga
aaatatattcaagcgggtaaagtggagttggaaatatctgttttgcgagcaatggatgct
gacgatcaaccggcaggcaaaggaagagatccgcctcaagatcttccctctccaaggcga
cctgacacctccttctcttggtttcacaatccgtggagagcgtgccgcttcgtcgtttgt
cgctattataaatggcggatagtatgctgttttgtatgcacgctattcgtgcttctagta
gcatgtggaatttatgcttttcctggatattttgttaaacgtctcttaggcgcttaa
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integrated database retrieval system