Polyergus mexicanus: 138937191
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Entry
138937191 CDS
T10742
Symbol
Dnalig4
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pmec Polyergus mexicanus
Pathway
pmec03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
138937191 (Dnalig4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmec03400
]
138937191 (Dnalig4)
Enzymes [BR:
pmec01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
138937191 (Dnalig4)
DNA repair and recombination proteins [BR:
pmec03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
138937191 (Dnalig4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
LIG3_BRCT
OstA_2
Motif
Other DBs
NCBI-GeneID:
138937191
NCBI-ProteinID:
XP_070159341
LinkDB
All DBs
Position
Unknown
AA seq
892 aa
AA seq
DB search
MAINLNDKIEFKELCDILENIAKAQRIKKKAQILQTFIDSCRNIGNKLKTEYPESDVSLY
PILRLILSHLDRERGPHNLKAPSLARLYANIHGFMKNSDNYKKLANYREPTSGKFVGNDF
ADRAYWILNKRLPKTSTGFTIARMNLFLDDISKKKATMQDKIETFRVLFRHITGFEMKWV
TRIVVKDLRLGIGTKQILDIYHQDANEKFLVTNDLREICNQLHDPKTKIKCGIQIFSNFK
PMLLERCDIENIEKLFRDNDLYYVQTKYDGERSQLHMKDGKFKYFTRRGYDITKNSGYGE
TGSSGFLTSVFTRRLNSNCHSFILDGELIGWHKEKGIFGTKGMNFDVKNLSANSRHQPCF
IAFDVILHNDILLVDVSYKDRLKLLNDIFTEEKGSLIICRSSLISNREELIEAFNECLRN
NEEGLVIKKHDMKYKPNVRDGGGCYKIKAEYSDNLIQDIDLIILGGYYGEGKYTGIIKSF
VIGVAAPTSNKEEYPLRFLAVASVSSGIRDQELRNLQTKFASHWIKECPENITGFKGKQP
DVWIRPENSIILTIRATEMIRSSESSIGYSLRFPRVVDIRMDKPWYSPCTSSELLLLVKN
KGMIQKLTKREATLHDVEEVPVSKLQKIINRNKPIEYNVYKERIVPLTRLLDGKEICVIN
GTDELAKEQIEEILQQHSARIVQNPMNTTFCVIVGNNRTIRGKEMVNSGKYDVVTLDWFK
RVTNRSDCVISLGDFLPWELLCSRDITKHRLAENYDEYYDNFIVDADEETLKHSFDKIGK
PLMDQFTVEQEKKMDKELFGNASPYSLFRDIIGFFENQSCCAKFKFRFMLGTIKDSIDNS
VTHVFVEDNETDTVGNLKAYDLASVKIVKCKWIEECFRNGQICDITNYLIDY
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggccattaatttaaatgataaaattgaatttaaagaattgtgtgatattttggaaaat
attgccaaggcgcaaagaataaaaaagaaagcgcaaatcttgcaaacatttatcgatagt
tgtcgaaatattggtaacaaactgaaaactgaatatccggaatcggatgtttcactgtat
ccaatattaagattgatattatctcatcttgatcgagagcgtggaccacataatctgaaa
gctccttcattagcaagactttacgctaacatacatggttttatgaaaaacagcgacaat
tataaaaagttagcaaattaccgagaacctacgtcaggcaaattcgtaggaaatgatttt
gctgaccgagcttattggattttaaataaaagattacctaaaacaagtactggcttcaca
attgcacgaatgaatttatttctcgatgatatatcgaagaaaaaagcaacaatgcaagac
aaaattgaaacatttagagtacttttccgacacatcacgggtttcgaaatgaaatgggta
acacgaattgtagttaaggatctacgacttggcataggaacaaaacagatattggacatt
tatcatcaagatgcaaatgaaaagtttctcgtgacgaatgatttgcgtgagatttgtaac
cagttgcatgatcctaagacgaaaataaaatgcggtatacaaatattttcgaatttcaaa
ccgatgctcttagagagatgtgacatcgagaatattgaaaagctatttcgggataatgac
ttgtactatgtacaaactaaatatgatggtgaaagatcgcaacttcatatgaaagatgga
aaattcaaatattttacgcgtagaggatacgatattacaaaaaattctggatatggagaa
accggatcttcgggtttcttgactagtgtgtttacgcgacgtttaaattcgaattgccat
tcttttatattggacggagaattaataggttggcataaagagaaaggaatatttggcacg
aaaggtatgaatttcgacgtcaagaatttgtcggcgaatagtcggcatcaaccgtgtttc
attgcattcgatgttattttacataatgacattttactcgttgatgtgtcttataaagat
cgattgaaactgcttaatgatatattcaccgaagaaaaaggttctttaattatatgtcga
tcatctttaatttcgaatagggaggaattgatagaagcattcaatgaatgcctccgtaat
aatgaagaagggcttgttataaagaaacatgatatgaaatacaaaccgaatgtccgagat
ggaggcggttgttataagatcaaagcagagtattctgacaatttgatacaagatatagac
ctgattatacttggcggttattacggagagggcaaatataccggaataattaaaagcttt
gtaataggcgttgccgctccaacaagtaataaagaagaatatccattgcgatttctcgca
gtagcatccgtaagcagtggaatacgggatcaagagttgcgtaatcttcaaacaaaattt
gcatcacattggattaaagaatgccctgaaaatattacaggctttaaggggaaacagccg
gatgtatggatccgtccagaaaattctataatcctgacgatacgagcaaccgaaatgata
cgcagtagtgaatcttccattggatatagtttgcgatttcctagagttgtagatatcaga
atggataagccatggtacagtccgtgcactagttccgaacttttgttattagtcaaaaac
aagggaatgattcaaaaattaaccaagcgagaggctactttgcacgatgtagaggaggta
ccagtatctaaattacaaaagataataaatcgaaataaaccaattgaatataatgtatac
aaagaacgaatagtaccgcttacgcgattattagatggaaaggaaatttgtgtgataaat
ggtactgatgaattagcgaaggagcaaattgaggaaatattgcagcagcacagcgctaga
attgttcagaatccaatgaatacaaccttctgcgtgatagtaggcaataacagaacgata
cgagggaaggaaatggtaaatagtggaaaatacgacgttgttactttggactggtttaaa
cgcgttaccaatcgatccgattgcgtgatctcgttaggtgactttttaccatgggaatta
ttgtgtagtcgagacataactaagcatcgactcgcggagaactatgacgaatattatgat
aattttattgtcgacgcggacgaagagactttgaagcattctttcgacaagattggaaaa
ccgcttatggatcagtttaccgttgagcaggaaaaaaaaatggacaaggaattattcggg
aatgcatcgccttattcactgtttagagatataattggattctttgaaaaccaatcgtgt
tgcgctaaatttaaattccgtttcatgttaggtacgattaaagacagtatcgataattcc
gttacgcatgtctttgtagaggataacgaaacagatactgtgggaaatttgaaagcatat
gatttagcgtctgtaaaaatcgttaaatgtaaatggatcgaggaatgtttccgaaatggc
caaatatgtgatattacaaactatctgattgattattag
DBGET
integrated database retrieval system
