Polyergus mexicanus: 138942425
Help
Entry
138942425 CDS
T10742
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
pmec Polyergus mexicanus
Pathway
pmec04512
ECM-receptor interaction
pmec04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138942425
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
138942425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pmec00535
]
138942425
Proteoglycans [BR:
pmec00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
138942425
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kazal_2
Laminin_G_1
Laminin_G_2
Kazal_1
Kazal_CFAI
EGF_laminin
EGF
Laminin_G_3
hEGF
EB
EGF_2
Motif
Other DBs
NCBI-GeneID:
138942425
NCBI-ProteinID:
XP_070168744
LinkDB
All DBs
Position
Unknown
AA seq
2308 aa
AA seq
DB search
MRRTSSNGLKLDLTENTPGSSLSRLPNLVEHAETCQALSAGTGENLSSKLPNVVEGSMDY
GSERRSSRYLEYQEIKSYQDPQSSASAAPAYHEGAYHDQSRGYRNYDRKTGVDFDRENLQ
RFDNRIYPEDALRYADRCADQRTYQESDLDAPYDRNDAQKLSKAYPELSDSSRRYSRDLT
DYEYASRYAEETLKLEPNKDLHHHPGKIYESAASKGYESGVKTHDSAYDLACSEQQEPPA
RQYESKYHSVSKMYGTLPRYESSKSYEPTYEPRPTYEPKYDERTYENASKGGYEPKYGLT
SSKSYERSKYESTTSSRYQDKSYDQTLKIGELGSSSSGAYARKHQDQEDTGAEKMNGYRK
SNFEAYGVYSDPEDDHGFLADKKAPQYTYKGVVVNVSGESAVVDQKRMAGKDGRQTEIIR
SPWCRPTILLLLLVLLVVIFVFVAGILLYFNYMSYKPRQPIIEGKDLNFASNNAEPCEKT
YCAWGATCVVSENGKALCQCPADCPLTSDPVCGSDDVTYTNYCHLRQASCHKRKNTRAKH
QGACEIKDPCTKLNCSQGSQCVRSRDGKEATCECLESCRNLGDHEGSGPVCGTDGIDYSS
LCDLNRIACTKGANITVAFRGKCDPCGSVECVEPEICQLDGSRQPACRCGEQCGLEFSPV
CGSDGKTYSNECGLRQEACRSRLPLKKIYNGACSSGQNPCEAAKCSFYEQCAINRQGIAN
CECGPECEPVMRPVCARGGTTYTSMCELKRQACLTRSNIEVAYVGTCGSRGPCSEKVCQW
GAICAENGGNAMCECPTCPAEFQPVCGDDGISYGNECKLRLEACQHRREIRVLYQGLCNG
CENKKCEFYGECESDSAGEAKCVCPSKCESSVTEPAGAEKVCGSNGVTYDNECDLKRASC
TSRTFIAISYVGDCEMCTRVKCEHGAHCVAGVCVCPKVCPESSGELVCGSDVKTYQSECE
LQRAACDRDPKLPALHVTFYGDCGDRLAVAALTTKSTLAVTRVATTIADMTSTQEREACK
DIHCDFEATCELGPDRFPRCSCRFDCASIPPENMRAVCGSDLRIYSSLCAMKMEACQRQQ
ELRLRPLDLCEGMEVKPCNGDPPLVDSEGNEYDCGSGPERKDCPSNSYCHQTTRFARCCK
KVLGNQVQKCADSWHGCCPDGKTAALGPDGAGCPSLCNCNRLGSMSDTCNPETGQCECRP
GVGGLKCDRCMPGYWGLPKISEGHQGCIPCGCSLFGSVREDCEQMTGRCVCKSGTQGHKC
TICNDHNKILTATGCYSVDTIPPIPTSCNELECYSGGHCTEIGGAHCVCPSSCPADVPSL
PVCGSDGQTYDNECELRLYACRHQADVVTQAFGHCRDDPMVNTDFPVKRYTAVQYTQPAA
AISPLSKSTRHLLVPEPDPRYYYTHRAHQETITIDRDNLKHGVAAAYRPTPATIRVITAL
LGDLCSDDKDCAIPNSECSNGGCICSEGYAETSDRQECFANYVPVTPTEEFRACLSYPCH
MTSTCIDLPSATFVCICRPNYTGLLCDEEIDKRDYEIPSFDGKSYVRMSRLKAYHKFSIE
VEFKTYADNGIILYNQQKSDGTGDFVSLAIVDGYVQFRYNLGNGPVVLTSSERVTMKTFH
RATAKRYHKDGVLIFNDGEDVAGQSQGMLKSLDLNQDTFVGNMPTNYTKVYDNIGTSHGF
LGCIRKLKINRNNVDLHVGRDKDVLESYRVKECGDNACANLPCQNGATCQPIFEEDLCNG
RECRRLQKRGKSRNNRGEKGGVNIVRCRGSRCTSIEKTRTRKNPRKRCVTGKCDYDYELK
YENDYDHGNYAVEKYEPPDYRCICPPQFTGRNCEGSLDPCIGEPCQHGATCDILPQGGYV
CKCPPGRTGIHCEILDAELTELLIPEMNGNGYLELPCLEGIAKAFSIELWFLTRANDGLL
LYNGQLNNGRGDFISLNLVHGRLEFRFNLGSGIANITSPDPISRDIWHCVRINRLGREGV
LQLDDGIVARGLSGSPLAELNLEMPLYVGGVKHWREVHRLSGAWTGLVGAVQRLMVNGKT
YQNLAVNITQRNTEIYDGLPCPSNENPCHNGGICLPLLNSYLCKCANGYNGLHCEYFMGY
DVSGTEISERPVRFEGDNFLQFKHRYGRSTNSTNTTLGEYFEESYSDYDLEEDVDYEYDS
YDYTERRGQQSNKFELRLRTVHPEGLIAWVGRGKLEHFFLSLHGGHVILTYKSKIENVSV
KSKERVDDGVFHHIRASRRRRACTLQIDEHAPVKISMETTLLTTNGKLFVGGKPGHPGIK
GCVTDFIVDKRRLPLARRKIDFCHDNDV
NT seq
6927 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggaccagcagcaacggcctcaagctcgacctgacggagaacacgccaggtagc
tcgttgtcgcggctgccgaatctcgtcgagcatgcggagacctgtcaggcgctgtccgcc
ggaactggtgagaatttgagcagcaagttgcccaacgtggttgagggctcgatggactat
ggtagcgagcgtaggtcctcccgttatctggagtaccaagagatcaagtcctatcaggat
ccccaatcgtccgcttcggcggcgccggcctatcacgagggtgcctaccacgatcaatcg
aggggataccggaattacgatcgaaagacgggcgtcgattttgatcgggagaatctccaa
aggttcgataacaggatctatccggaggacgcgctgagatacgccgatcgttgcgcggat
cagcgaacttaccaggagtcggatctggacgcgccttacgatcgtaacgacgcgcagaag
ctcagcaaagcttatccggagctgtcggactcgagcagacgatattcgcgggatctgacc
gattacgagtacgcgtcgcgttatgccgaagagacattgaagctggagccaaacaaggat
cttcatcatcatccgggcaagatctatgaatcggccgcctccaagggttacgagtctggc
gtgaagacacacgattctgcttacgatctcgcctgctccgaacagcaagaaccaccagcc
agacagtatgagagcaagtatcactcagtcagcaaaatgtatggcactttgcctaggtat
gagagcagcaagtcctacgagccgacgtacgagcccaggcctacctatgagcccaagtac
gacgagcggacgtacgagaacgccagcaagggtggttacgagcccaagtacgggttaacc
agctcaaagagctatgagagatccaagtatgagagcacgacgtcgtccaggtaccaggac
aagtcttacgatcagaccctgaagatcggcgagctgggctcgtcctcgtccggcgcgtat
gccaggaagcatcaggatcaggaagataccggcgcggaaaagatgaacggatacaggaag
agtaatttcgaggcctacggggtttactcggatcctgaggacgatcacggcttcttggcg
gacaaaaaagcgcctcagtacacatacaaaggcgtcgtggtaaatgttagcggtgagtcc
gcagtggtcgatcagaaacggatggccggcaaggatggcaggcaaaccgagataatcaga
agtccttggtgcaggccgaccatactgctgctcctgctggtactcctggtcgtcatcttt
gttttcgtcgctgggatattattatatttcaattacatgtcctacaagccgcgtcaaccc
attatcgagggtaaggatctaaatttcgccagtaataacgcggaaccctgcgagaagact
tactgcgcttggggcgcgacgtgcgtcgtgtccgaaaacggcaaggctctgtgtcagtgt
cctgcggattgtcctttgacttccgatcctgtctgcggctccgacgacgtgacctacacg
aactactgtcacttacgacaggcgagctgtcacaaaaggaaaaacaccagggcgaagcat
cagggcgcatgcgaaatcaaggatccttgcacgaagctgaattgctcgcagggctcgcaa
tgcgtgcgaagcagggacggtaaagaggcgacttgcgaatgcttggaatcttgccgaaat
ttaggggatcacgagggttcgggacctgtctgcggcacggatggcatcgactattcgtcg
ttgtgcgatctaaatcggatcgcgtgtacgaaaggtgctaacatcaccgtggcatttcgc
ggtaaatgcgatccctgcggaagcgtcgagtgcgtagaaccggagatctgtcagctggac
ggttcgaggcaaccggcctgtcgctgcggagaacaatgcggccttgaattttcaccggta
tgcggaagcgatggtaaaacatattcgaacgaatgcggtcttcggcaggaagcctgtcga
tcgagattaccgctcaagaaaatctacaacggcgcctgcagctccggacaaaatccctgc
gaagcggcaaagtgcagcttctacgagcaatgcgcgatcaatcgccaagggatcgccaat
tgcgaatgcggccccgaatgtgagccggtgatgaggcccgtgtgcgcccgcggcgggacc
acctacacgtccatgtgcgagctcaagagacaggcgtgcctgacgaggagcaatatcgaa
gtcgcttatgtcggcacgtgcggctccaggggaccctgttccgagaaggtgtgccagtgg
ggcgcaatttgtgcggaaaacggcggcaatgctatgtgcgaatgtccgacttgtccggca
gaatttcagcctgtgtgcggcgatgatggcatcagctatggcaacgagtgcaagcttcgc
ctggaggcatgtcagcatcgacgggagatacgcgttctgtaccaaggattgtgcaatggc
tgcgagaacaagaagtgcgagttttacggcgaatgcgaaagcgacagcgccggagaagcc
aaatgcgtttgtccatcaaagtgcgagagttcggtgacagagccggcgggtgcggagaag
gtttgcggatccaatggagtgacctacgataatgaatgcgacttgaaaagggcgtcgtgc
acgagccggaccttcatcgccattagctacgtgggtgactgtgaaatgtgcacgagggtg
aagtgcgagcacggggcgcattgcgtagcgggtgtgtgcgtgtgcccgaaggtctgcccg
gagagcagcggcgagctcgtttgcggtagcgacgtgaaaacttaccagtctgagtgcgag
ctgcagcgagcagcctgcgacagggatcccaagttgccggcgttgcacgtcacgttttac
ggggactgcggcgacagattggccgtggcggcgttgacgaccaagtcgacactcgcggtg
acacgcgtggccaccaccatcgccgacatgacgagcacgcaggagcgcgaggcctgcaag
gacattcactgcgacttcgaggcaacctgcgaactcggcccggacaggttccccaggtgc
agctgcagattcgattgcgcctccatcccgccggagaatatgcgggccgtctgcggtagc
gacctcaggatctactcctccctctgcgccatgaagatggaggcttgccagaggcagcag
gagcttcgactgaggcccctcgatctctgcgaaggcatggaggtcaagccttgcaacggc
gatcctccattggtagactccgagggtaacgaatatgactgcggtagtggaccagaacgc
aaagactgccctagcaatagttactgccatcagacgacacgattcgctcgttgctgcaag
aaagtcctaggtaatcaggtgcaaaaatgcgcggactcgtggcacggctgttgcccggat
gggaagaccgccgcccttggtccggacggcgctggttgcccgagtttgtgcaactgcaat
aggctcggtagtatgtcagatacctgcaatccggaaaccggtcaatgcgagtgcaggcca
ggcgtgggcggtctgaagtgtgacagatgtatgccgggttactggggactgccgaagata
agcgagggtcatcagggatgcataccgtgcggctgctcgctattcggttccgtcagagaa
gactgcgagcagatgacaggacgttgcgtctgcaagtctggcacccaggggcataaatgc
acaatctgcaacgaccacaacaagatactcaccgccaccggatgttactcagtggacacg
ataccgcccatacctacgtcctgcaacgagctggaatgctactcgggcggccactgcacc
gagatcggcggcgcgcactgcgtctgcccgtcctcgtgcccggccgacgtgccgtccttg
ccggtttgcggcagcgacgggcagacctacgacaacgagtgcgagctaaggctatacgcg
tgtcgccaccaggccgacgtggtcacgcaggccttcggccactgcagagacgaccctatg
gttaacacggacttccccgttaagagatacacagctgtacaatatacccaaccagcggcc
gctatttctccgttgtccaaatccacgcggcatctcttggtaccggagccggacccacga
tattattacactcatcgagctcatcaagagactatcaccatcgacagagataacttaaag
catggagtagccgcggcgtatcgaccgacgccagcgactattcgagtgatcactgctctc
ctgggtgatctttgtagcgacgacaaggattgcgcaatacctaacagcgaatgctcaaac
ggcggctgcatctgttccgagggctatgcggaaactagtgatcggcaggaatgtttcgcc
aattacgtgccggtgacgccgaccgaggaatttcgcgcctgcctctcgtatccctgtcac
atgacctcgacgtgcatcgacttacccagcgcaactttcgtctgtatctgccgaccgaat
tataccggactgctgtgcgacgaggagatcgacaagcgagattacgagataccatccttt
gacggtaaaagctacgtgaggatgagtcggctgaaagcgtatcacaaattcagcatcgag
gtcgagttcaaaacatacgcggacaacggaatcatactgtacaatcagcagaagagcgac
ggcaccggcgactttgtctcgctggctattgtcgacggatatgtgcaattcagatataat
ttgggaaacggacctgtagttctcacgtcatcggaaagggtgaccatgaagaccttccat
agagcgacggctaagaggtaccataaagacggagtgctaatctttaacgacggcgaggat
gtagccgggcaaagtcaaggaatgctgaagtcgctggatctgaatcaggacactttcgtc
ggaaacatgccgactaattataccaaagtctacgacaacatcggtaccagtcacggattt
ctcggctgcatacgcaagctaaagatcaatcgaaacaacgtggacctccacgtgggtcgc
gacaaggacgtcctcgagagttaccgcgtcaaggagtgcggtgacaatgcctgcgccaat
ttgccctgtcaaaacggggcgacgtgccagccgatcttcgaggaggatctgtgcaatggc
cgggaatgcaggaggttgcagaaaagaggcaagagcaggaacaatcggggcgaaaagggc
ggggtgaacatagtcagatgccgtggttcccgctgcacgtcgatcgagaagacgaggacc
aggaagaacccgaggaagcgctgcgtcaccggcaagtgcgactatgattacgagctcaag
tacgagaacgattacgatcacggcaattacgcggtggagaagtacgagccgccggattac
agatgcatttgcccgccgcagttcaccggtcgaaattgcgaggggtcgctggacccctgc
atcggcgagccctgccagcacggtgccacctgcgacatcctgccacagggaggatacgtg
tgcaagtgtcctcctggtagaaccggcatacactgcgagatcctggacgccgaattgacg
gaattgctgattcccgagatgaacgggaacggatatctggagctgccttgcctggaaggc
atcgcgaaagcgttctctatcgaattatggttcctcactcgcgccaacgacggtcttctg
ctttataacggccagctaaacaacggcaggggcgatttcataagtctgaacctggtccac
ggcagactcgagtttagattcaatctcgggagcggtatcgcgaacatcacgtcgcctgat
ccgatcagtcgcgatatctggcactgcgtgagaatcaacagactcggtagagagggagta
cttcagctcgacgatggaatcgtcgctagaggattatctggaagtcctctcgcagaattg
aatttggaaatgccgctttacgttggtggagtcaaacactggcgggaagttcatcgcttg
tccggagcctggaccggattggtaggcgctgtgcagagactaatggtaaacggcaaaaca
tatcagaatctcgcggtgaatattactcaacgcaacacggagatttatgacggtctaccg
tgtcccagcaatgagaatccttgccacaacggcggtatctgccttccacttctcaacagt
tacctctgcaagtgcgccaatggttataacggtctgcactgcgaatattttatgggttac
gatgtgtccggtaccgagatatcggagcgacctgtgcgtttcgaaggtgacaatttcctg
caattcaagcaccgctatggaagaagtactaactcgactaacactaccctcggcgagtac
tttgaggagtcctactccgactacgacttggaggaggatgtcgactacgagtacgacagt
tacgattacacggagcgcaggggacagcaatcgaacaagttcgagttgcggttaagaacg
gtacatcccgagggtctcatcgcgtgggtgggaagaggaaagttggaacatttcttttta
tctttgcatggcggtcacgtaatactcacttacaagagcaagattgaaaatgtatccgta
aaaagcaaggaaagagtggacgatggagttttccaccacatccgagcatctcgacgacgg
agagcatgtacgctccaaatcgacgaacacgcgcccgtcaagatctcgatggaaacgacg
ttactgacgaccaacggcaagctcttcgtcggcggtaaacccggtcatcccggcatcaag
ggctgcgtgacggatttcatcgtcgataaacggcgattgccgttggccagacgaaagatc
gatttctgccacgataacgacgtatga
DBGET
integrated database retrieval system