Pseudomonas mediterranea: E3Z27_22045
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Entry
E3Z27_22045 CDS
T08284
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E3Z27_22045 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmed03400
]
E3Z27_22045 (nth)
Enzymes [BR:
pmed01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
E3Z27_22045 (nth)
DNA repair and recombination proteins [BR:
pmed03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E3Z27_22045 (nth)
Prokaryotic type
E3Z27_22045 (nth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Ogg-HhH
DprA_N
ChiW_Ig_like
DUF2400
Motif
Other DBs
NCBI-ProteinID:
QHA84147
LinkDB
All DBs
Position
5064924..5065562
Genome browser
AA seq
212 aa
AA seq
DB search
MNAAKRLEIFRRFHEDNPEPKTELAYSSPFELLIAVILSAQSTDVGVNKATAKLFPVANT
PEAIHALGVEGLSEYIKTIGLFNSKAKNVIETCRLLIERHGSVVPQTREALEALPGVGRK
TANVVLNTAFRQLTMAVDTHIFRVSNRTGLAPGKNVVEVEKKLMKFVPKEYLLDSHHWLI
LHGRYVCLARKPRCGSCRIEDLCEYKHKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgcaaaacgcctggaaatatttcgtcgctttcacgaagacaaccccgagccg
aaaaccgaactggcctattcctcgccgttcgagttgttgatcgcggtgatcctctcggcc
cagtccaccgatgtcggcgtcaacaaggccacggccaagctgtttccggtggccaacact
ccagaggcgatccatgccctgggtgtcgagggactatcggagtacatcaagaccatcggc
ctgttcaacagcaaggcaaagaacgtgatcgaaacctgccgtctgctgatcgagcgccat
ggcagtgtcgttccccagacccgcgaggcgctggaagcccttcccggtgtaggccgcaag
accgccaacgtggtgctcaatactgcgttccgccagttgaccatggccgtggacacccac
attttccgcgtcagcaaccgcaccggcctggcgccgggcaagaacgtggtggaagtggag
aagaagctgatgaaattcgtgcccaaggagtaccttctcgactcccatcactggctgatc
ctgcatgggcgctacgtctgcctggcccgcaagccccgctgtggcagttgtcggatcgaa
gacctgtgcgaatacaagcacaagacctctgacgattga
DBGET
integrated database retrieval system
