Poecilia mexicana (shortfin molly): 106904461
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Entry
106904461 CDS
T08022
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TTC3-like
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmei04121
]
106904461
Enzymes [BR:
pmei01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106904461
Ubiquitin system [BR:
pmei04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106904461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
WHD_TTC3
TPR_2
TPR_BSK1_C
TPR_16
TPR_17
TPR_1
TPR_11
TPR_19
TPR_9
Motif
Other DBs
NCBI-GeneID:
106904461
NCBI-ProteinID:
XP_014824289
LinkDB
All DBs
Position
Unknown
AA seq
1661 aa
AA seq
DB search
MSDSDSDGDWGFHRNKKFLKSHGSLKINPSERVFSQWGSIPLQTKKEGAQRMRICVFWFP
TLLQPEISKTFTWAAEVGLINEEKSEMLDVENLRRIQVVETILLHLEVASLDKDSSRHIF
IFCNMLHQHCSPEILEEAVRWLETLGDRFRREQLLCLGGFPNCYATFGFIFSEYAKFIRE
MSNNLDGTMRSLKAPPDASSTMESEEMKILGNEKFQAQQYAEALKFYTNAIKCYPDNHIL
YGNRALCYIKQKEYLKAAGDGKRAVLIDPLWAKGHYRYCEALFFLGAMDLALEANSTARW
LCRENPEGLRDLDQQFLKFRPEPLPAELLQRPQSFKVGLMKKIPQPTKTGGKNNPTRSSA
AKVIETKTDKKTVPSDPEGRLKDPKTSRSERDDLSGSRNKSKSQSETQEANQKMADSKAD
LCKELRFLVHEAHSALSDLRSRNAEQAFSQALGLLEAATPKKLGLSSLDVLLLLFGRASA
LIEIGQPEELAEAEKLLERMKSFEERTFQCLVYYAIGRVFLRENRFKVAMQQFSDSLQMV
KNQITPGKLTWPLTKEIVKETQADRFKEMLEKSIELCRFPPAPDAVCRLEKCLCPLKAEI
YFTDPDFKGYIQICCCQSCKVEFHISCWKSLKSTKFSEKNEKDVLNEACLTPDCLGKICS
IRIFGPTGLVKCKFETTITKPELPKKPRVNQKATSVKKLKSKEDQKQKRKQFKQTFKDQQ
TISHEILQKKDDSGSPSQQKAWLVYRDRVLLQINQNLDLLREEQGLQVSALASGLRPWLE
LDWARGNRLAGRLLNWQQERLQTLGQAVELLLERKNRVWARVFIQQLSGCVGINAKLSKW
ACQLDGAGLTAAQSFIERHSERLEQLDLAVLLNFDPLKQMILEKLDTKPDLFWRLGLTVT
EYLKQASAHDVRLFIWTLEEHRHDYVCCHSILDEYFDMMDAHCSVLKKSENDHISPTRTK
SRGRKKKRKGVLGLPPARALTPRDEWDQDLFEEDSLSFLHPGDPFSVPSHLREQVADFED
QYRTEHTKFLGNHPDSTKESLYDYFAQILEEHGPLVDEDRLLVGELANFPAEARRKIAET
GGLESFLLESLRFIKIGRRIGLTRHAVGPRHAASLDDLDDIGDPRHDAASPDPYMLGDFS
DYLSGFCFPAAVAQPVLPNPYSFYPTGSDAAPAWSNIDCGFIANGYAEPHLDALDNIYEH
LESDPAPHRNALSSETSRCRSDAAVQASPGAVSSVAVNTERHERWEAQQGDIIRQERSNR
KLEQQILKTQNGNKVDQSEHDDVRLMEKEVKEITTNIQVTHKELLMFQQKLEEEVKKDQK
EKKSNQEELKALKTEVEHLVEEQASFSRSIREKKSSYEAKLNDFLELSNQSAAEKMSLED
EIRRHQALLTSAGRRSYTAQLSAAESSRDQSLNVLHRELADAKTLLSKLDEAAHRTQNQE
LESARNGCKAKVEEVQKNISTAERRCQDLLDQLKGRRDGAAAPIGPVLQLPAAANDPQPA
HAASPXRRQEGAATRLCFPEGHGQPDRHVSRLFQVQLDAFRSGLPPGQRRKSEPGATTGS
GQRRGAAHPGPSGNAEVIWRRGPVQPGSGEPEPGVAAGRSAESPKPERSEHGGSLHHLPR
GHESGGHLCAGVSAQLPRPVHPVLAEGEEHLSHLQDPRAAA
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattcagactcggatggcgattggggtttccaccgcaacaagaagtttctgaaa
tctcacggatcccttaaaataaacccttcagagagagtgttcagccagtggggctccatc
cccttacaaaccaagaaggaaggcgctcagcggatgagaatttgcgtcttctggtttccc
acgctgctgcagcccgagatctcaaaaaccttcacttgggcggcagaagttggcttaatc
aacgaagagaaaagtgaaatgctggatgtggagaacctccgcaggattcaggtggttgaa
acgatcctgctgcacctggaagtggcaagtttggacaaggattcctccagacacattttc
attttttgcaacatgttgcatcagcactgctctccagagatcctggaggaagcggtgcgc
tggctggagacgctgggcgatcggttcagacgggaacagctgctctgcctgggaggattc
cccaactgctacgcaacattcggcttcatcttctcagagtatgccaagtttatccgggag
atgagcaacaacctggacggtacgatgaggtccctgaaggcaccgcccgatgcatcgtct
acaatggaaagtgaagagatgaagattcttgggaacgagaagtttcaggcccagcagtac
gcagaagctctgaagttttacaccaacgccatcaaatgctatcctgataatcacatcctg
tacgggaacagagcgctgtgctacatcaagcagaaggaatatctaaaagcagcaggagat
ggaaaacgtgccgttctcatcgacccgctctgggcaaagggccattaccggtactgtgag
gctctgttcttcctcggggccatggacctagcgttggaggccaacagcaccgcccggtgg
ctgtgcagagaaaacccggagggactcagagatctggaccagcagttcttgaagttcagg
ccggagccgctgcctgctgagctgctgcagaggcctcaaagctttaaggttgggctgatg
aagaaaatccctcagccgacaaaaacaggcggtaaaaacaacccgaccaggagctcagct
gcgaaggtcatcgagacgaaaacggacaaaaagacagtgccgtccgacccggagggacga
ctcaaagaccccaaaacgtccagaagtgagcgcgacgacctcagtggttctaggaacaag
tcaaagagccaaagcgagacgcaggaagcgaaccagaagatggccgacagcaaagcagat
ttatgtaaggagctgcggtttctggtgcacgaggctcacagcgcgctgtcggacctgcgc
agccgcaacgcagagcaggccttcagccaggcactggggctgctggaggcagccacgccc
aagaaactgggactttcctccctggatgttctgctgctgctgttcggtcgagcgtcggcc
ttgatagaaatcggacagccggaggaactggcagaagcagagaaactcctggagaggatg
aaatcgtttgaagagcgaacgttccagtgtctggtttattacgccattggcagagtgttt
ctacgagaaaaccggtttaaagttgccatgcagcagttttcagattcgctgcagatggtg
aagaatcaaattacgccaggtaaactcacctggcctttaaccaaagagattgttaaagaa
acacaagcagacagattcaaggagatgcttgagaaatcgatagagttgtgtagatttccc
cccgcccctgacgccgtctgtcgtcttgaaaaatgtctttgccctctaaaagctgagatc
tatttcactgacccagattttaagggctacattcagatatgctgctgtcagagctgcaag
gttgaatttcacatcagctgctggaagagcctaaagtcgaccaaattcagtgaaaagaat
gaaaaggatgtcctgaatgaggcgtgtttgactcccgactgtctgggtaaaatctgctct
atacgaatctttggtcccacgggtttggtgaaatgtaagtttgaaacgacgatcacgaaa
ccggagctgccgaagaaaccccgagttaaccagaaagccaccagtgtgaagaagttaaag
tccaaagaggatcagaagcagaagaggaaacagttcaaacagacgtttaaggatcagcaa
accatcagccacgaaatcctgcagaagaaagacgactcgggatcgccgagtcagcagaaa
gcctggttggtgtacagagaccgggttctgctgcagatcaaccagaacctggacctgctg
cgggaggagcagggcctgcaggtgtcggcgctggccagcggcctgcggccctggctggag
ctggactgggcccgggggaaccgcctggccggccgcctgctcaactggcagcaggagcgg
ctgcagacgctgggccaggccgtggagctgctgctggagcgcaagaaccgggtctgggcc
cgggtcttcatccagcagctcagcggctgcgtgggaataaacgccaagctgagcaagtgg
gcgtgtcagctggacggcgcagggctgaccgcggcgcagtccttcatcgagcggcactct
gagcgcctggagcagctggacctggcggtgctgctgaactttgaccccttaaagcaaatg
attttagagaaactggacactaaaccagatttgttttggcgcctcggcctgacggtgacg
gagtatctaaagcaggcctcggcgcacgacgtccggctttttatctggactctggaggag
catagacacgactacgtttgttgtcacagtatactggatgaatattttgatatgatggat
gctcattgttctgtgttaaaaaagtctgaaaatgatcatatttctcctactcgaactaaa
agtcgaggccggaaaaagaaacgaaagggtgttttgggtttgcctccggcccgagcgcta
acgcccagagacgagtgggaccaggacctttttgaagaagactctttatcgttccttcac
cccggtgacccgtttagcgttcccagccaccttagagagcaggtggctgattttgaggac
caatacagaacggagcatacaaagtttttagggaaccatcccgactccaccaaagaaagt
ttgtatgactattttgcccagatcctggaggagcacggcccgctggtggacgaggaccgc
ctgctggtgggcgaactcgccaactttccggctgaggcccggaggaagatcgcggagacg
ggaggcctggagagcttcctgttggagtcgctgcgcttcattaagatcgggcggcgcatc
ggcctgacgcggcacgccgtcggcccgcggcacgccgccagcctggacgacctggacgac
atcggcgacccgcggcacgacgcggcgtcgcctgacccgtacatgctgggcgatttctcc
gactacctgtctgggttctgcttccccgctgccgtagcgcagccggtcctgcccaacccg
tactccttctacccaacaggaagtgacgctgcgcccgcctggtcaaacatcgactgcggc
ttcattgccaacggttacgccgagccgcatctggacgcgctggacaatatttatgagcat
ttggaaagtgatccggctcctcacaggaatgctttgtcctcggagacgagtcgttgccgt
agcgacgcagcagttcaggctagtccaggcgccgtgagcagcgtggcggtgaacacagag
cggcacgaacgctgggaggcgcagcagggtgacatcatcaggcaggagcggagcaacagg
aagttggagcagcaaatactgaaaacccaaaacggcaacaaagtcgaccagagcgagcat
gacgatgtccggctgatggagaaggaggtgaaagaaatcaccaccaatatccaggtgacc
cataaggagctgctgatgttccagcagaagctggaggaggaggtgaagaaggaccagaag
gagaagaaatccaaccaggaggagctgaaggcgctgaagacggaggtggagcacctggtg
gaggagcaggccagcttttccaggagcatcagagagaagaagagcagctatgaggccaaa
ctcaacgacttcctggagctcagcaaccagtcggcggctgagaagatgagtttggaggat
gagatcaggcgccaccaggctctgctgacctctgctggcaggaggtcctacacagctcag
ctgtcagcggctgaaagcagcagggatcagagtctgaacgtcctgcacagagagctagcc
gatgccaagacgctgctcagtaagctggacgaggcggcgcacagaacccagaaccaggag
ctggaatctgcgaggaacggctgcaaagctaaagtggaggaagtgcagaagaacatttct
actgctgagcgccgctgccaggaccttctggaccagctgaagggccgccgagacggtgca
gccgctcccatcggaccggtcctgcagctccctgcagcagctaacgaccctcagccggcc
cacgccgcctctccgncccgccgccaggaaggagccgctactcgtctctgttttccagaa
ggccatggacagcctgaccgccatgtttccagactattccaggtccaacttgatgcgttt
cgttcaggacttccgcctggccagaggaggaagtctgaacctggtgccactacaggaagt
ggtcagcggcgtggcgcagctcatcctggaccatcaggaaacgctgaagtcatctggcgc
cgcgggccggtccagcccggctcaggggaaccagaacccggtgtggcagctggtcggagc
gcagagagtccgaaacccgaacgctctgaacatggaggatccctgcatcatctgccacga
ggacatgagtccggaggacacctgtgtgctggagtgtcggcacagctaccacgaccagtg
catccggtcctggctgaaggagaagaacacctgtcccacctgcaggacccacgcgctgct
gcctga
DBGET
integrated database retrieval system
