Poecilia mexicana (shortfin molly): 106907132 Help Entry 106907132         CDS       T08022                                  Symbol traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism pmei  Poecilia mexicana (shortfin molly) Pathway pmei04010   MAPK signaling pathway pmei04120   Ubiquitin mediated proteolysis pmei04140   Autophagy - animal pmei04144   Endocytosis pmei04620   Toll-like receptor signaling pathway pmei04621   NOD-like receptor signaling pathway pmei04622   RIG-I-like receptor signaling pathway pmei05132   Salmonella infection pmei05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:pmei00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     106907132 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     106907132 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     106907132 (traf6)    04140 Autophagy - animal     106907132 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     106907132 (traf6)    04621 NOD-like receptor signaling pathway     106907132 (traf6)    04622 RIG-I-like receptor signaling pathway     106907132 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     106907132 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     106907132 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pmei04131]     106907132 (traf6)    04121 Ubiquitin system [BR:pmei04121]     106907132 (traf6) Enzymes [BR:pmei01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      106907132 (traf6) Membrane trafficking [BR:pmei04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     106907132 (traf6) Ubiquitin system [BR:pmei04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     106907132 (traf6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 TRAF6_Z2 zf-C3HC4_4 zf-RING_5 TRAF3_RING RING_XB3-XBAT31 zf-TRAF_2 zf-rbx1 BLI1 U-box zf-RING_11 Motif Other DBs NCBI-GeneID:  106907132 NCBI-ProteinID:  XP_014828170 Ensembl:  ENSPMEG00000014523 UniProt:  A0A3B3XBJ4 LinkDB All DBs Position Unknown AA seq 570 aa AA seqDB search MACCESNKGSLEEDSYDGAVGSLSECALLMQEKERESLLSPSESPGTLMNSSSSSLQTPA PLQGYDVEFDPPLESKYECPICLMALRNAIQTRCGHRFCKSCIEKSIRDTGQRCPVDNEM LSEDQLFPDNFAKREILSLTVRCPNSGCTYKMELRHLESHLAMCQFATVPCPQCQQPVRK SYLEEHKAVECHRRPMSCPDCVASFVFEDKELHEQQCPFASVRCQYCEMDLIRDQMESHC DIDCPKAPIACNFSMFGCKERMQRHDLAQHMQEFTQMHMRYMAEFLRSLSLNGTSPKPLR TPGPSILAEDIGAAAPAAACGGLRGAASCSISSAATQPTEEMQRIREMDARLVKQDHQLR ELIILKDTQAEQLMDLRRKVSMLEETVKELEAQHCHGIFIWRLRGFSHLLRNQEAGQTVV EHSPGFYTGRPGYRLCLRLHLQTPNAPRCSNFISLFVHTMQGVFDGQLTWPFQGTIRLAI LDQGPECQHHMEVMETKPDLQAFQKPVIARNPKGFGYVTFLHLQQLSQKAFLKDDTLLIR CEVTPRFDSMFHREGPAVQPRGPEASISKE NT seq 1713 nt NT seq  +upstreamnt  +downstreamnt atggcttgctgtgaaagcaataaggggagtttggaggaggacagctatgacggagcagtt ggatcgctgtctgaatgtgccttgttaatgcaggaaaaagaaagagaatcccttttaagc ccatcagagagtcctggcaccttaatgaacagctcatctagtagtcttcagacccctgcc ccacttcagggttatgatgtggaatttgacccacccctcgagagtaagtatgagtgccca atctgcctgatggccttaaggaatgccatccaaacacggtgtggtcaccgattctgcaag agctgcattgaaaagtctattcgtgatacaggacagcgatgccctgtggacaatgaaatg ctgtcagaagaccaactgtttcctgataattttgccaaaagagagattctatcgctaact gttcgttgtccaaactctggctgcacttacaaaatggagctccgacatttagagagtcat ttggctatgtgtcagtttgccactgtgccttgtccacagtgccagcagcctgtaaggaag agctacctagaggagcacaaagctgttgagtgccacagaaggcccatgtcttgcccagac tgtgtggcatcctttgtttttgaggataaagagctacatgagcagcagtgcccgtttgcc agtgtgaggtgccagtactgtgagatggatctgatcagagaccagatggaatcccattgt gatatagattgcccaaaagcccccattgcctgtaactttagcatgtttggctgtaaggaa aggatgcagcgacacgacctggctcagcacatgcaagagttcacacagatgcacatgcgt tacatggcagagttcttacgtagcctcagcctcaatggcacatcgcccaaacctctcaga actccagggccgtccattttggccgaggatattggcgctgcagcaccagcggcagcctgc ggcgggctcagaggagctgcgagctgcagcatcagctcagccgcaactcagcccaccgag gaaatgcagaggatcagagagatggatgcgcgattggtgaagcaggatcaccagctgcgt gagctcatcatactgaaagacacacaagcagagcaacttatggatctgcggcgtaaggtc tcaatgctggaggaaactgtgaaggagctggaggcccagcattgccacggcattttcatc tggcgcctccgaggtttctctcatctcttgcgcaaccaagaagcaggccagacagtggtc gagcacagccctggcttctacacgggccgtccaggctacaggctgtgtctgcgcttacac ctgcagacgcccaacgccccacgctgctccaacttcatctcccttttcgtccacactatg caaggagtttttgacgggcagctgacatggccttttcaaggaacaattcggcttgccatc ttagaccagggacccgagtgtcagcatcacatggaggtcatggagacaaagccagacctg caagccttccagaaacctgtgattgcacgcaatcccaaaggatttggctacgtcactttt ttgcatctgcaacagctgagtcagaaagcttttctgaaagatgacactctgctgatccgc tgcgaggtgacgccacgctttgatagcatgtttcatcgggagggaccggccgtgcagcca agaggacctgaagcatcgatatcaaaagaataa

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