Poecilia mexicana (shortfin molly): 106907616
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Entry
106907616 CDS
T08022
Symbol
brca1
Name
(RefSeq) breast cancer type 1 susceptibility protein
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03440
Homologous recombination
pmei03460
Fanconi anemia pathway
pmei04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106907616 (brca1)
09124 Replication and repair
03440 Homologous recombination
106907616 (brca1)
03460 Fanconi anemia pathway
106907616 (brca1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmei01009
]
106907616 (brca1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmei04121
]
106907616 (brca1)
03036 Chromosome and associated proteins [BR:
pmei03036
]
106907616 (brca1)
03400 DNA repair and recombination proteins [BR:
pmei03400
]
106907616 (brca1)
Enzymes [BR:
pmei01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106907616 (brca1)
Protein phosphatases and associated proteins [BR:
pmei01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106907616 (brca1)
Ubiquitin system [BR:
pmei04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106907616 (brca1)
Multi subunit type E3
BRCC complex
106907616 (brca1)
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
106907616 (brca1)
DNA repair and recombination proteins [BR:
pmei03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
106907616 (brca1)
BRCA1-A complex
106907616 (brca1)
BRCA1-B complex
106907616 (brca1)
BRCA1-C complex
106907616 (brca1)
BRCA complex
106907616 (brca1)
FA (Fanconi anemia) pathway
Downstream FA components
106907616 (brca1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-Nse
RING_XB3-XBAT31
RTT107_BRCT_5
zf-RING_5
zf-MIZ
zf-ANAPC11
zf-RING_6
zf-RING_10
zf-rbx1
zf-RING_4
PTCB-BRCT
TRAF3_RING
RING_ZNF598
Motif
Other DBs
NCBI-GeneID:
106907616
NCBI-ProteinID:
XP_014828906
Ensembl:
ENSPMEG00000021503
UniProt:
A0A3B3Z0K4
LinkDB
All DBs
Position
Unknown
AA seq
1316 aa
AA seq
DB search
MATPKATDVRKGISVLWETLQCPICLDLMSAPVSTKCDHQFCKFCITKLLDNSKQNRANC
PVCKFKITKRSLQESPGFQRLVAGLQEMIQAYEHDTCTNYFTGLPQQRKNTKNTETSKHA
CDLSFGDASGFEQDNKGTEHQNDSPQSSSSTVAAQNGFAQLMGLEDSASITAENEGLDSG
LGDVPPTSDKKMSDNLESETANVGKNATDASKNKRQKRKPEKSSDYLDSTQEEPGQQDVQ
KSSRKKQKKDLEHNKILEQKKKKSLEKVAEWLLKVPAEEELELEKPLHSEDESDSSSSTS
TLVVEPQNVESNPKRERRGKALEEQVFGVIYKRRESKVTEPLIAKEIETCNRSSKLKNNN
ARLCEEQQIVENDTGCDFFKEPEQMAVEEKLDETVEELNQKESNKYQGEHKVPVADIVQP
ETTPPTRRTRKSLQQPDGNLQDENQLKSKGTNEKSDCRKEKNSKLSRKKPTKVAKPLVLV
EVQDREASPKPSERVKEVEVQIETYPSSEEQTTPVMKSARRSRRLQLFVDEVQGSHKKTT
SKATATKTDKVAKKQSDKTMDATPSKSGNLTKEAKRNGCVSEEDISVIESVGKRGGMSSM
QAEAEIPEALMLAKPDCIVSVVPNSTSPTDPSIVGPTLEGEKQENNHPPGSQQETFANVE
EYEDGKNDSELDTEQLLQSFKAAKRKSFLLGDPNAKRSRGLDVENTEGSQHNCSSSEISE
NINQALKSTCSDVISPSNSPSKIRKPDQALLDASNPTGNCPSRSSVSSGLSPNKVAKRDR
DSPLSVVPQVVDSGLRFTGVEQEAATASQSDYNLTEIPGGISKCPSKNKIETIFVGESSL
TPAQEVKEANGSGEVSTQSSIQTNKKKKKKRKTQRLEYSSESSSSSKEELPTLAQILGTS
DCPQAEIKHQGEISEAIRLEGVDEEPLGRPAGSLTPDQLDSSQASVDLFGTPEECDAPEN
CVGVSFESSQFSSEVLVTQQKIEMQKELVRLEKLMALVSEVLQEKEGSPAAGTNQGCEDR
GPELDGQDQVQSSDRKGILDAETKASDDKVAERGGFPGPAVQDSTHAESTVKDTKAPNSL
SAAKKAKTCDSPPDCQEDKENNSPPKEKSTAKLVLVSSGLGPNEQIMVKKFAKRVGGLVV
SRVTPEVTHVIMRTDDQLVCERTLKYFLGIAGRKWVVSFQWISECFKEKKLLEERSFEVR
GDVVNGPNHQGPLRARTAGDSNLLMKGYRICFQGPFTDMSTDELEWMVELCGAAVVKDPL
VLDGEQKSHQIVVVQPRSDSSSSYSSLSRSATVVTRGWLLDSVATYTLQNYSSYTV
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccaaaggccacagatgtcagaaagggaatctcagtcctctgggaaactctt
caatgtcccatttgcctggatttaatgtctgcaccggtttctactaaatgtgatcaccag
ttttgcaaattttgtattacgaagcttttggacaactccaaacagaacagagccaactgc
ccagtgtgtaaattcaagataacaaagaggagcctgcaggagagccctgggttccagaga
cttgttgcaggacttcaggagatgatacaagcatatgaacacgacacctgcacaaactac
ttcactggactgccacagcaaagaaagaacactaaaaatacagaaacaagtaaacatgct
tgtgatttatcatttggagatgcatctggatttgaacaggacaataagggaactgaacac
caaaatgattctccacagtccagctcctcaactgtagcagctcagaatgggtttgctcag
ctcatgggactcgaagattctgcatctataacagcagaaaacgaaggtctggatagtggc
ctgggtgacgtcccaccaacatctgacaagaaaatgtcagataacttagagtcagaaacg
gcaaatgttgggaaaaacgcaacggatgcgtctaaaaacaaaaggcagaagcggaaaccg
gagaagtcctctgactatttagattcaactcaagaggaacctggtcaacaggatgtccaa
aagtcctctagaaagaaacagaaaaaggatttggagcacaacaagattcttgagcagaaa
aagaagaaaagtttggagaaagtcgcagagtggctcctcaaagttccagccgaagaagag
ctggaactagagaaacccctccacagtgaagacgaatcggatagcagttcgtctacatca
acgctggtcgttgagccgcaaaacgtcgaatctaatcctaagagagaacgtcgcggcaaa
gcccttgaagagcaggtttttggtgtcatctacaagcgaagagaaagcaaagttacagaa
ccactaatagctaaagaaatagaaacttgtaatagatcttcaaagctgaagaacaacaac
gcccgtctttgtgaagagcaacaaatagtagaaaatgacaccggctgtgacttttttaaa
gaaccggaacagatggcagtcgaggaaaagcttgatgaaactgtggaggagttgaaccag
aaagaaagcaacaaatatcagggggaacacaaggttcctgttgctgatatcgtacaaccg
gaaactacaccaccaacgagaaggactcgcaaaagtctgcaacagcctgatggcaattta
caagacgaaaatcagctgaaatcaaaaggtaccaacgagaaaagcgattgtcggaaagaa
aaaaattctaagttaagcagaaagaaaccaactaaggtggcaaaacctcttgtgttggtc
gaagttcaggatagggaagcaagtcctaaacccagtgaaagagttaaagaagtcgaagtt
caaatagagacttatcccagcagtgaggaacagacgactccagtcatgaagagcgccaga
agaagcagaaggcttcagctttttgttgacgaggttcagggaagtcacaagaaaacaacc
tctaaagctactgcaactaaaacagacaaagtcgctaaaaagcaatctgataaaacaatg
gatgcaactccatctaaaagtggaaaccttacgaaggaagctaaaagaaacggatgtgtt
tctgaggaggatatcagcgtgatagaaagtgtaggaaagaggggaggaatgtcttcaatg
caagctgaagcagagatacctgaagcgctaatgctagctaaacctgactgtatcgtctct
gtggtcccgaactccacaagtccaaccgatccatccattgtcggtccgacgcttgaaggt
gagaagcaggagaataatcacccacctggctctcagcaggaaacatttgctaacgttgaa
gagtacgaggatggcaagaacgacagcgagctggacacagagcaacttctccaaagcttc
aaagctgccaaacggaaatctttccttcttggggaccccaacgcaaagagaagtcgcggt
ttggatgtagaaaacactgaagggagccaacataactgttcaagctctgaaatatcagaa
aatataaaccaggctttaaaatcgacttgtagtgacgtgatttccccttccaactcgccc
agtaagattagaaaaccagatcaagctctactggacgcctccaaccctactgggaactgt
ccatccaggagcagcgtcagcagcggtctcagtccaaacaaagtggcaaagcgtgacaga
gacagtcctctctctgtcgtccctcaggttgtggactctggcctccgcttcacaggtgtt
gagcaggaagcagcaacggcttcccagagcgactacaacctgacggagatcccaggcggc
atttcaaaatgtccttcaaagaacaaaatcgagacaatttttgttggagaatcttcttta
accccagcccaagaggtcaaggaagccaacggcagcggagaagtcagcactcaatcctcc
atccagaccaacaagaagaagaagaagaagaggaagactcagaggctggagtattcatcc
gagtccagcagctcatctaaagaggagttaccgactttggctcagatcttgggaacatca
gattgtcctcaagctgagattaaacatcagggagaaatcagcgaagccatcagattggag
ggagtcgatgaggaaccgctgggtcgtccagctggaagtctgaccccagatcagctcgac
tccagccaggcatccgtcgacttgttcggcacacctgaggaatgtgacgcccctgaaaac
tgcgtcggcgtttcctttgaatcgtcacaattctcaagcgaagttcttgttactcagcaa
aagatagaaatgcagaaggagctggtgaggctggagaagctgatggctctcgtgtcagag
gtgcttcaggagaaagaaggcagtcctgctgcaggaaccaatcagggctgtgaagacagg
ggcccagaactggatggccaggatcaagtccagagttcagacaggaagggtattttagat
gcagaaaccaaagcatctgatgataaggtggcagagcgtggtggctttccaggacccgct
gttcaagattcgactcatgctgaatcaactgtaaaagacacaaaggcccctaattcactt
tctgcagccaaaaaggcaaaaacttgtgattcacctccagattgccaagaagacaaagaa
aacaacagccctccgaaagaaaaatctacagctaaacttgttctggtgtcgtccggattg
ggcccaaacgagcagataatggtgaaaaagtttgccaagagagtcggcggtctcgtcgtt
tcccgggtgacaccagaggtgacgcatgtcataatgcgcacagatgatcagctggtctgc
gaacggacactgaaatacttccttggcatcgcgggtcggaaatgggtcgtcagcttccag
tggatttctgaatgcttcaaggaaaagaaactgttggaagagcgttcgtttgaagtgaga
ggcgatgtggtgaacggaccgaaccaccaggggccgttaagagcccgcaccgcaggggac
agtaatctgctcatgaagggatacaggatctgcttccaggggccgtttaccgacatgtcg
acagatgagctggagtggatggtggagctgtgtggcgctgctgtagttaaagacccactt
gtccttgacggcgaacagaagtcccaccagatcgtcgttgttcagcccagatccgactcg
tcttcctcctacagcagtctgtccaggagcgccacagtcgtgacccgcggttggctgctg
gattcagtcgctacgtacacgctgcagaactacagcagctacaccgtgtga
DBGET
integrated database retrieval system
