Poecilia mexicana (shortfin molly): 106908074
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Entry
106908074 CDS
T08022
Name
(RefSeq) Smith-Magenis syndrome chromosomal region candidate gene 8 protein homolog
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106908074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmei04131
]
106908074
Membrane trafficking [BR:
pmei04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
106908074
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
Motif
Other DBs
NCBI-GeneID:
106908074
NCBI-ProteinID:
XP_014829534
Ensembl:
ENSPMEG00000020556
UniProt:
A0A3B3YYR4
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MIGSPDLLPFTGSGGFEEEGEEPGVHTLPEEFSVRLLPPHNPWSTAAQFHRDFILVAEFS
EQVGPKPVLTIPNNPKVIGSFDLNHFSVRIMSVDYQASGPGHTAPALPGPRLNFSEDSRV
ILGDSADDSFAYVHHLTLYDLEARGMVRPFCMAYVCSDQSKLMENFSELSECFSQASDSL
KTGNRQAFSSELQRKLQELEYRRRALLQDTHASTGAGGRADELEALEHLILNHRELLRQV
TSYPNRKLQQPDFLPYDTADLQSEPSSPCLPSTASCRSESLLKPLEELCNFYFLSLVKNQ
LADTERRLRGDRSVLRTDRVSQLLSRKLKLTNFLFELCCPVDAEEEEEEDEAERVMGNTV
GAVERQSEKHSVELFSCVEEIQIKMEGVGGGRVTPDPSTSTDMMGSVSSSDSIEVLGTEK
SYRSQWAVVSDSRETRVGTTDVILQHAAGDAGIRRLRASARRANSEDSIEVLSTTESIVP
DDLSAITEEEAEHLTLTNGFEEEEESEAGCKTDEVLQEERMKNTATAGKERAESAGRKEL
LEEIMFNVPEKDNSLTEKSNEVHKDKMNKLLQAGDAVESRQKKLRPVFDLHVKMAPKSVV
AEGALRTPPCGPVRLLSVDEFSDCTSFTSSSEPPSPTTANLTSTCVDKKRKRRRAGLRAL
RFIKQLSFSQHAIFCLLIGRPLVVIGGDEQLVRKLVDGLRLFLPAPGADGSAVMSCLATP
LQLTDLLTWRLVGIHRSSSSASSSILQSLTHLSRYIAVLDLDQKTLRCPSYAGSLVGFLA
NPHTGISRGLTYLLHLESCLTALANRVLLQTFTAASQRYRAIAEEKDSQQAPQLCSSEND
FRVMHFLTDLIAQRHTGHGPPPFRFSYSSVQLHRNTYPT
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgattggctcaccggacctgctgcccttcaccggcagcggggggtttgaggaggaagga
gaggaaccgggggttcacactctgcctgaggagttctctgtccgccttttaccgcctcac
aacccctggagcacagcagcccagtttcaccgggactttatactggtggctgaattctca
gagcaggttggtccaaagcctgtcttaacaataccaaataatccgaaggtcatcggctcg
tttgacctcaaccacttctccgtccgcattatgtctgtggactaccaggcgtccggcccg
ggtcacacagcccctgctctgcctggaccccgcctcaatttcagcgaggactccagggta
atcctgggagactcagcagacgactcgtttgcgtatgttcatcacctgaccctgtatgac
ctggaggctcgggggatggtgcgacctttctgcatggcctacgtgtgttcggaccagagc
aagctgatggagaacttctctgagctgtccgagtgtttttctcaggcctctgacagcttg
aagactggaaacagacaagcgttctcctctgaactgcagagaaagcttcaggagctcgag
tacagacggagggccctgctgcaggacacacacgcctccacaggagcaggaggcagagct
gatgagcttgaagctttagagcatctgatcctgaaccacagagagctccttcgccaggtc
acatcctacccaaacaggaagctccagcagcctgacttcctgccctacgacacggccgac
ctgcagtctgagccgtcctctccctgccttccctccactgcctcctgcaggtctgagtcg
cttctgaagccactggaggagctctgcaacttctacttcctgtccctggtgaaaaaccag
ctggcagacacagagcggcgtctgcgtggtgacaggagcgtcctgcgaactgatcgtgtc
tcacagctactgtccaggaagctgaaacttacaaactttctgtttgagctgtgctgccct
gtggatgctgaggaggaagaggaggaggatgaagcagagagggtcatggggaacactgtg
ggagctgtggaaagacaatcagaaaagcatagtgtggagttgttctcctgtgtggaagaa
atacagataaagatggagggagtgggaggtgggagagtgacccctgaccccagcacgtcc
acagacatgatgggcagcgtgagcagcagcgacagcattgaggttctcgggacggagaag
tcgtaccgaagtcaatgggccgttgtatccgacagcagagaaacccgtgtcgggacgaca
gacgtgattctccagcatgcagcaggagacgcaggcattcggcgcctgcgagcctctgcc
aggcgtgccaacagtgaggacagcatcgaggttctcagcacgactgagtccatcgtccct
gatgacctgtccgccatcacagaggaagaggcagagcatctcactctgaccaatggattt
gaggaagaggaagagtcagaagctggctgtaagactgatgaagtcctccaggaggagagg
atgaagaacactgctactgctgggaaggaaagagctgaatctgctggaagaaaagaactt
ttagaggaaataatgttcaatgttccagagaaagacaattcactcacagagaagagtaac
gaagtccataaagacaagatgaataaactgctacaagctggagacgcagtggagtcgagg
cagaagaagttgaggccggtgtttgacctccatgtaaaaatggctcctaaaagcgtcgtg
gcggagggagctctgcgcacgccgccctgcggtcctgtgaggctgctcagcgtggacgag
ttctctgactgcaccagcttcaccagcagctcagagccaccgtctcccaccacagccaac
ctcaccagcacatgtgtggacaagaaaaggaagaggagaagggctggcctgcgagccctc
aggttcatcaagcagctctccttctcccagcatgccatcttctgtttgctgattggccgg
ccactggttgtcatcggaggagacgagcagctggtgaggaagctggtggacggcttgagg
ctcttcctgccagctcctggtgctgatgggagcgctgtgatgtcatgtttggccacgccc
ctccagctgaccgacctgctcacctggaggctcgtaggaatacacagatcgtcttccagt
gcatcctcttccatccttcagtctctgactcacttgagtcgttacatcgctgtgctggac
ctggatcagaagacgctgcgctgtccttcatacgccggatccctggtcggcttcctagcc
aaccctcacaccggcatcagccgcggcctgacctacctgctgcacctggagagctgcctg
actgcgctggccaaccgggtgctgctgcagaccttcaccgctgcttcccagcgttacaga
gccatcgccgaggaaaaggactcacagcaagcaccacaactctgcagcagtgaaaatgat
tttcgagtgatgcactttctgactgacctgatcgcacagcgccacaccggacacggaccg
ccgcctttcaggttttcctacagctcagtgcagcttcacaggaacacatatccaacataa
DBGET
integrated database retrieval system
