Poecilia mexicana (shortfin molly): 106908951
Help
Entry
106908951 CDS
T08022
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmei04131
]
106908951
Membrane trafficking [BR:
pmei04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106908951
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
106908951
NCBI-ProteinID:
XP_014830713
Ensembl:
ENSPMEG00000002842
LinkDB
All DBs
Position
Unknown
AA seq
1863 aa
AA seq
DB search
MKLGKAKSSKDDHKRGDEPAILEMEDLDKKAMRLAGMLEPDTISLASVTAVTTNVSNKRS
KPDIKMEPSSGRPVDYQISITVIEARQLIGLNMDPVVCVEVGDDKKYTSMKESTNCPYYN
EYFVFDFHVPPDVMFDKIIKLSVIHSKNLLRSGTLVGTFKMDVGTVYSQPEHQFYHKWAI
LSDPDDITAGCKGYVKCDIAVVGKGDNIKTPHKANETDEDDIEGNLLLPEGIPAERQWAR
FYVKIHRAEGLPKMNTSIMANVKKAFIGENRDLVDPYVQVQFSGQKGKTSVQKSSYEPIW
NEQVIFTELFPPLCKRIKVQIRDSDKVNDVAIGTHFIDLRKISNDGDKGFLPTLGPAWVN
MYGSTRQYTLMDEHQDLNDGLGEGVSFRARLLISVAVEILDTTSPEIICSTDVQVEPVSN
ISESATGKMEEFFLFGSFLEATMIDRKIGDKPISFEITIGNYGNHIDGVSKSSSVKKKKK
EGENQEEENELIQNSSEDEADEDADLTSVSSTPPMKPFITDRNYFHLPYFEKKPCVYIKS
WWQDQRRRLYNSNMMDKIADKLEEGLNDVQEVIKTEKAFPERRLRGVLEELSIGCSRYVT
LANKDVNLAGRTKLDRERLKSCMREMDSMGQQAKQIRTQVKKNTVKEKLKLAQNFLQRIR
FLADEPQHSIPDVFIWMMSNNKRIAYARIPSKDILYSVVDEETGKDCGKVKAVFLKLPGK
KGFGPAGWTVQAKLELYLWLGLNKSRKDFLHGLPNGFEEIRATKMGHGLPPVTLVYDMKQ
VFQLRAHMYQARSLFAADSSGLSDPFARVFFSSQSQVTEVLNETLCPTWDQLLVFDDVEL
FGEATELRDDPPIIVVEFYDQDTVGKAEFIGRTFAKPTIKMRDEPYGPPRFPPQLEYYQI
YRGNSIAGELLAAFELLQIPFDAEEIRRALIAVHDFAVPQIKVGQGGRADLPPLEGPTDS
ERGPILPVPLGIRPVLSRYRIEVLFWGLRDLKRINLAQVDRPRVDIECAGRGVQSALIQN
YKKNPNFSTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYILVGSHAVSTLRHYIYSPP
DKSCNNWATAAKLMNGYMVLTNGCSQARSSPSLSSRTFSRPAGDVSVSLEAEPPIRKMDT
VVKLDAMSDAVVKVDMNEDESDKEKKKKKKKKKGGVEEEEETDERVLDWWSKYFASIETL
KENLRSQEAAQAEAEEREDLEIAAEAADIRPDDLHLKGSKMKERFKEKKSSKQKRSQAAD
GSEKRPPKARVDELVVYNRELESEYGNFEDWLHTFNLYRGKAGDDDEHALDDDRIVGRFK
GSLCMYKVPLSQEITREAGYDPNMGMFQSIPHNDPIHVLVRVYVVRATDLHPADINGKAD
PYVVIKLGKSEVKDKENYISKQLNPVFGKSFDIEATFPMESMLTVSVYDWDLVGTDDLIG
ETKIDLENRFYSKFRATCGIASNYSMHGYNIWRDPMKPSQILAKLCKEGKIDGPHYGPGG
KVKVANRIFTGPTEIEDENGLKKQTEEHLALSVLNHWEEIPRVGCKLVPEHVETRPLLNL
DKPGIEQGRLEMWVDMFPMDMPAPGPAIDISPRKPKRYELRVIIWNTDEVILEDDDYFTG
EKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRFVFPFDYLVAEEKIVISKKESM
FSWDETEYKIPPRLTMQVWDADHFSADDFLGAIELDLNRFPRGAKTAKQCNLDMIRNEQE
LPTISIFKQKRVKGWWPFVARDENDEMELTGKVEAELHLVTAEEAEKSPVGLGRNEPDPL
EKPNRPDTSLMWFLGPLKSLRYFIWHNYRWLILKALGLILLLLMLGLFLYSIPGYLVKKI
LGA
NT seq
5592 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttggcaaggcaaaaagctcaaaagacgaccataaaagaggagatgaaccagcc
atcctggaaatggaagatctggataagaaagccatgcgtcttgctggaatgctggagccg
gacaccatatctttggcctcggtgactgctgtcacaactaacgtttccaataaaaggtca
aagccggatatcaagatggaaccgagctccgggaggcccgttgattatcagatcagcatc
acagtgattgaggctcggcagctaataggcctgaacatggatcctgtggtgtgtgtggaa
gttggcgatgacaagaaatatacatccatgaaggagtccaccaactgtccgtactataat
gagtattttgtcttcgatttccacgtcccaccagacgtcatgtttgacaagatcatcaag
ctctcggttattcattctaaaaaccttctaagaagcgggacgttggtgggaacctttaag
atggacgttgggacggtttactctcagcctgaacaccagttctaccacaaatgggccatc
ctgtctgaccctgatgacatcacagcggggtgcaaaggatatgtaaagtgtgacattgca
gttgtcgggaaaggtgataacatcaagacgccgcataaagccaatgagacggatgaggac
gacatagaaggaaatctgctcctcccagaaggcatcccagcagagaggcaatgggcgaga
ttttatgtgaagatccacagagctgagggacttccgaaaatgaacaccagcatcatggcg
aatgtgaaaaaggcctttatcggagagaacagagaccttgtcgacccctatgttcaagtg
caattttctgggcaaaagggaaagacttcggtccagaagagcagctatgaaccaatctgg
aacgagcaagtcatcttcacagagctgttccctcctctttgcaagaggatcaaggtgcag
attagagactcggataaggtcaatgacgttgccataggaacccacttcatcgatctacgg
aagatctcaaacgatggtgataaaggcttcttgcccaccctgggtccagcctgggtcaac
atgtacggctccactcgtcagtacactctgatggacgagcaccaggacctaaatgacggg
ctcggcgaaggcgtgtccttcagagcacgcctccttatctccgtagccgtggagatcctg
gacactacgtcgcctgaaatcatctgctcaaccgacgttcaggtggagcctgtctccaac
atctcagagagtgccacagggaaaatggaggagttcttcttgtttggttcgtttctggag
gctactatgatcgacaggaagattggtgacaaaccgataagttttgaaatcacaatagga
aattatggcaaccacattgacggtgtgagcaaatcctcctctgtgaagaagaaaaagaag
gaaggagagaatcaggaagaggaaaatgagctgatccaaaactccagcgaggatgaggct
gatgaagacgcggacctcacctcagtctcctcgactcctcccatgaagcctttcatcaca
gacagaaactacttccatctaccctactttgaaaagaagccatgtgtctacatcaagagc
tggtggcaggatcagaggagacggctttataattcaaacatgatggataagattgcagac
aagttggaagagggcttaaatgatgttcaagaggtcattaagacagagaaggcctttccg
gagcgcagactcaggggagttctggaggagctcagcattggctgcagtcggtatgtgaca
cttgccaacaaagatgtgaacctggcaggcagaactaagcttgatcgagaacggctcaag
tcatgcatgagagagatggacagcatgggacagcaggccaaacagattcgcacacaagtg
aaaaaaaacacggtcaaagaaaaactcaagctggcgcagaacttcctgcagaggatccgt
ttccttgccgacgagcctcagcacagcatcccagatgttttcatctggatgatgagtaac
aacaagcgcatcgcctatgcccgaattccttccaaagacattctgtactctgtggtggat
gaagaaactggcaaagactgtggaaaagtcaaagcagtcttcctcaagctgcctggtaaa
aaggggtttggccctgctggctggacagttcaggctaagctggagttatatctgtggctc
ggcctcaacaagagccggaaggacttcctacatggtctcccaaatggtttcgaagagatc
agagccaccaaaatgggccacgggcttcctccagtcaccctcgtctacgacatgaagcag
gtgtttcagctccgagctcacatgtaccaggcccgcagtctgtttgcggctgacagcagt
gggctttcagaccccttcgctcgggttttcttctcctcacaaagccaggttactgaggtt
ctaaatgagacgctctgccccacgtgggaccaactgctggtgtttgatgatgtcgagctg
tttggagaggctactgagctcagagacgaccctccgatcattgttgttgagttttatgac
caagacactgtgggtaaggcagagtttataggtcggacgtttgcaaagcccactattaag
atgcgtgacgagccttacggacccccgaggttccccccgcagctggagtattaccagata
tacagagggaacagcattgcaggagagctgctggctgctttcgagctactgcagatacct
tttgatgcagaggagatcaggcgagctctaatcgctgtccatgactttgctgttcctcaa
ataaaggttggtcaaggaggcagggctgatcttcctccccttgaagggccgacggactcg
gagcgtggacccatcctccctgttcccctgggcatacgtcccgtcctgagtcgctaccgc
atagaggtattattctggggattaagggacctgaaaaggatcaatttggcccaagttgat
cgaccccgggtggacatcgagtgtgcaggtcgaggagttcaatctgccctcattcagaac
tacaagaagaatcccaacttcagcaccctggtcaaatggtttgaagtggacctgccagaa
aatgagcttctccatcctcctcttaacatccgggtggtggactgcagagcattcggacgc
tacatcctggtggggtcccacgctgtttccactctcagacattatatctacagtcctcca
gacaaaagctgcaacaattgggccactgcagctaagctaatgaatggctacatggttcta
accaatggctgctcccaagctcgctcctcacccagcctttcttcccgcaccttctctcgt
cccgcaggtgacgtctccgtcagcctagaagccgagcccccaatccgaaagatggacaca
gttgtcaagttggatgctatgtctgatgctgttgtaaaagttgacatgaacgaagacgag
agtgacaaagaaaaaaagaagaagaaaaagaagaagaagggaggagtagaggaggaggaa
gagacggatgagcgagtgctggactggtggtccaagtattttgcctccattgagacgctg
aaggagaacctcagatcccaggaagcagctcaagcagaggcagaggagagagaagacctc
gagatagcagctgaggcagcagatatcagacccgacgacctccacctaaaaggctccaaa
atgaaagaaaggttcaaagagaagaagagctccaagcagaagaggagtcaagctgcggac
ggctcagagaagcggccccctaaagcaagagtggatgagctagtggtgtacaacagagag
ctggagagtgagtatggcaactttgaggattggcttcacacgttcaacttgtacagagga
aaagcgggagatgatgacgaacacgccctggatgatgacaggattgtaggcagattcaag
ggctctttatgtatgtacaaagtaccactttctcaggagatcacaagagaagctgggtat
gatcccaacatggggatgttccagagcattccgcataacgaccccatccacgttcttgtc
cgcgtctatgtggtcagggccacagaccttcatccagctgatatcaatgggaaggccgat
ccatacgtcgtcattaagctgggcaaatcagaagtcaaagacaaagagaactacatctcc
aagcagctcaaccctgtgtttggcaaatcctttgacattgaagccaccttccccatggag
tcgatgttgacagtgtctgtgtatgactgggatttggtcggcacagacgacctgattgga
gaaacgaagattgacctggagaatcggttttacagcaaattcagagccacgtgtggcatt
gcgtccaactattctatgcatggttacaacatttggcgcgaccctatgaaacccagccag
atcctagctaagctctgcaaggaagggaagattgatggacctcattatgggccgggaggc
aaagtcaaagtcgcgaatcgaatctttactggaccaacagaaatagaggatgaaaatggt
ctgaagaagcaaacggaggagcatttagccctgagcgtgttgaaccactgggaggagatc
ccgagagtcggctgcaagctcgttcccgaacatgtggagaccagacctcttctgaacctg
gacaaacctggaatcgaacagggccgacttgagatgtgggtggacatgtttccgatggac
atgcccgctcctgggcctgcaattgacatatcaccacggaaaccaaagagatatgagctc
agggtgattatttggaatactgatgaagtaatactggaagacgatgattacttcactggg
gaaaagtccagtgacatatttgtgaggggatggctgaaagggcagcaggaagacaaacag
gacacagacgtgcattaccactccctaactggtgagggcaacttcaactggcgcttcgtc
ttcccgttcgattacctcgtggctgaagagaagatcgtcatctctaagaaagagtccatg
ttctcctgggacgagactgaatacaagatccctcctcgtctcacgatgcaggtctgggac
gccgaccacttttctgctgatgactttctcggggctattgagctggacctgaacaggttc
ccccgcggcgcaaagacagccaagcagtgcaacctcgacatgatccgaaatgaacaagaa
cttcccaccatttctatcttcaagcagaaaagggtcaaaggctggtggccttttgtggca
cgtgatgagaacgacgagatggagctcacaggtaaagttgaggctgagcttcaccttgtc
actgcagaggaagcagagaaaagtcctgtgggactggggagaaatgagccggacccactg
gagaaaccaaaccgtccggatacgagtctaatgtggtttctgggccctctgaagtcactt
cgttacttcatctggcacaactaccgctggctgatcctcaaggctctggggctgatactg
ctgctgctcatgctgggcctcttcctctactccatccctggctaccttgtcaagaagatc
ctgggggcctga
DBGET
integrated database retrieval system