Poecilia mexicana (shortfin molly): 106921393
Help
Entry
106921393 CDS
T08022
Name
(RefSeq) sodium channel protein type 4 subunit alpha A-like isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmei04040
]
106921393
Ion channels [BR:
pmei04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
106921393
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
BUD22
Motif
Other DBs
NCBI-GeneID:
106921393
NCBI-ProteinID:
XP_014848552
Ensembl:
ENSPMEG00000016178
LinkDB
All DBs
Position
Unknown
AA seq
1881 aa
AA seq
DB search
MANLLPPPGIAVFRPFTQESLAEIKRLAEERKKSAEAEDHDGGEPVGPHPDLEAGKSLPL
IYGDPPSELLNTPLEDLDPFYKAQNTFVVISKGNTIYRFNAEPACYILSPFSVIRRGSIK
ILIHSLFSMFIMITILSNCVFMTMSNPPAWSKTVEYVFTGIYTFEATVKVLSRGFCIGSF
TFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQS
VKKMGDVMVLTVFALAVFALVGLQLFMGNLRHKCVRWPILMNEVFNATMAVNESMYSNSS
FDFAEYIENPENQYFTEGSIDALICGNSSDAGKCPEGYTCMKAGRNPNFGYTSYDSFGWA
FLALFRLMTQDFWENLFQLTLRAAGRTYMLFFVVVIFLGSFYLINLILAVVAMAYYEQNQ
ATQLEAIEKEEEFQRLLEQLKNQEQAQFHGSRATLASKKSASQHTLSEMEDNGPGLKQGE
AVNDCNGRVVPRLMIRAPTMEESAVDYEVKEKSLGSVHSTLHLEEPGLKKRSGSAATVLS
VVAMEELEEAQRPCPPCWYKFADMFLKWDCCPTWIVFKKWVHFVVMDPFVDLAITICIVL
NTLFMAMEHYPMTPEFDNMLSVGNLVFTGIFAAEMFFKLIAMDPYYYFQVGWNIFDSIIV
TLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAII
VFIFAVVGMQLFGKNYKDCVCKISADCELPRWHMNDFFHSFLIVFRILCGEWIETMWDCM
EVAGPAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSAGDEDGEMNNLQIAIGRIT
RGIDWLKAFLIQRIQQILGKKPKESDKETADDGKPKAEEVKMNHLDACLTLKVADGISDG
PVQSQPSGFTVDGELSLKVPIAEGESDYDNLSDDDDEDDGEQDVDEEDDELPESALRRDD
EQNTENREDESSIPEKVKCDDGDSSVCSTADYRPPEPEPEKKEEEEPEPEEPEACFTDDC
VTKWPCLTVDTTSGKGKEWWNLRKTCFTIVEHDWFETFIIFMILLSSGALAFEDIYIERR
RTIKIILEFADKVFTYIFVIEMLLKWVAYGFKTYFTNAWCWLDFFIVDISLISLVANWMG
YSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMG
VNLFAGKFYRCINTTTEELFPMTEVNNRTECLALEEATREARWINVKINYDNVGKGYLSL
LQVATFKGWMDIMYAAVDSREVEEQPSYEINLYMYIYFVIFIIFGSFFTLNLFIGVIIDN
FNQQKKKFGDQDIFMTDEQKKYYEAMKKLGSKKPQKPIPRPMNPIQGIVFDFISQQFFDI
FIMVLICLNMVTMMVETDDQSPEKEDFLFKLNVAFIVVFTGECVLKLFALRQYFFTNGWN
VFDFIVVILSIAGTMLSDIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMM
SLPALFNIGLLLFLIMFIFSIFAMSNFAYVKKEAGIDDIFNFETFGGSIICLFQITTSAG
WDGLLLPMLNREPPDCDPEFENPGTDVKGNCGNPGMGMMFFCSYIIVSFLVVVNMYIAII
LENFNVAQEESGDPLCEEDFEMFNETWEKFDLDGTMFIEYSRLSDFCDTLQEPLRVAKPN
RLRLIGMDLPLVIGDRIHCLDVLMAVTQMVLGDTVEMAAMRDSIEAKFILSNPTKDSFAP
ITTTVRHKEEQQAAVVLQRAYRNHLLKRCVRHAAYMHRLKRIGRNYNDDDPPEKEGLLAR
RLGVLYGTNIDLADEMELEALEPLTSQEPFNTDCERAQYLQEPPVQNTIVVPAEITSEEL
LHSAPNQEPLPLQANLREPLV
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacctgctccctcccccaggcattgcggtcttccgcccgttcacccaggaatca
ctggcggaaatcaagaggctcgcggaggaaaggaagaaatcagcagaagcagaagaccac
gacgggggagaaccagtggggccacaccctgatctggaagctggaaagagcctaccccta
atatatggagaccctccttcagagttgctcaacacacccctggaggacctggaccccttc
tacaaagcccagaatacatttgtcgtgatcagcaaaggaaacacgatttacaggttcaac
gctgagccagcttgttacattctcagcccctttagtgtgatcaggagaggatccatcaaa
attctcatacattcattatttagcatgttcatcatgattaccattctgtcgaactgtgtg
ttcatgacgatgagcaacccaccagcatggagtaaaactgtggaatatgtttttacagga
atctatacctttgaggctacggtcaaagtgttgtcaagaggtttctgcattggttcgttt
acattccttcgagatccatggaactggctggatttcatggtgatcagcatggcctacatt
actgagtttgttgaccttggcaatgtgtcggctctcaggacatttcgtgtacttcgagcc
ctgaaaacaattactgtaattcctggcctgaagaccattgtgggggctttgatccagtcg
gtgaagaaaatgggggacgtcatggtcctgaccgtctttgccctcgcagtctttgccctc
gtcggtctccagcttttcatgggaaacctgcgtcacaaatgcgtgcgatggcccattctg
atgaacgaagttttcaacgccaccatggctgtaaatgagtctatgtactccaacagttct
tttgattttgccgaatacatcgaaaatccggaaaatcagtatttcacagaaggcagcata
gatgctctaatttgtggcaacagctctgatgctggaaagtgcccagaaggatacacatgc
atgaaggctggaaggaaccctaactttggctacaccagttatgactcttttggatgggcc
ttccttgctctgttcaggctcatgacacaggacttctgggagaatcttttccagctgact
ctgcgggcagctgggaggacatacatgctgttctttgtggtggtcatcttcctgggctcc
ttctacctcatcaacctcatcctggctgtggtagccatggcttattatgaacagaatcaa
gcaactcaactggaggccatcgaaaaagaggaggaattccagcggcttttagagcaacta
aaaaatcaagagcaggcacagttccatggaagccgagccaccctggccagtaagaagtct
gcgagtcaacacacattatcagagatggaagataatggacctggtctcaagcagggtgag
gctgtgaatgactgcaacggaagagttgttcctcgcttgatgattcgagcgcccactatg
gaggagtctgctgtagattatgaagtcaaagagaagtcactgggctcggtgcacagcaca
cttcacctggaagaacctggcttgaagaagagatctggtagtgctgcgacagtgctgtct
gtggtcgccatggaagagttggaggaggctcagagaccctgcccaccttgctggtacaaa
tttgcagacatgttcttgaagtgggattgctgccccacctggattgtttttaaaaagtgg
gtgcactttgtggtcatggatcccttcgttgacctcgctattaccatatgcattgtgctc
aacacccttttcatggcaatggagcactaccccatgaccccggagttcgacaacatgctc
tcagtaggaaatctggttttcactgggatctttgcagctgaaatgtttttcaagcttatc
gccatggatccctattactatttccaagttggatggaacattttcgacagcattattgta
actctcagcctggtggagttgggtctggcaaatgtccagggtctgtcagtcctaaggtca
ttccgtttgcttcgtgtcttcaaactggcaaagtcttggcccacactcaacatgctcatt
aagatcatcggtaactctgtgggcgctctggggaacctgaccttggtgctggccatcatc
gtcttcattttcgccgtagtgggcatgcagctctttggaaagaactacaaggactgcgtg
tgcaagatctccgcagactgtgagctgccacggtggcacatgaatgacttcttccactcc
ttcctcatcgttttccgcatcctgtgcggcgagtggatcgagacgatgtgggactgcatg
gaggtggctgggcccgcgatgtgcttaatcgtcttcatgatggtcatggtcattggaaat
ctagtggtattgaacctcttcttggcgttgctgctcagctcattcagcggagacaaccta
tcggcaggggatgaagatggcgagatgaacaatctgcagattgctattgggaggatcaca
cgaggcatcgattggttaaaggcatttctcatacagcgaatccagcaaatacttggtaaa
aagcccaaggagtcggataaggagacggcggacgatggaaagcctaaagccgaggaagtc
aaaatgaaccatttggacgcctgtctgactcttaaagtagcagatgggatttcagatggc
cctgtgcaaagccaaccctctggattcacggtggatggagagctcagtctgaaagtccca
atcgctgagggagaatcagattatgataatctgagtgacgatgatgatgaagatgatggt
gagcaggatgttgatgaagaagatgacgaacttccagagagtgcactgcggagagatgat
gaacaaaatacggaaaaccgtgaagatgaaagtagtatcccagaaaaagtgaaatgtgat
gacggggattcttcagtctgcagcacagctgattatcgtcctcctgagcctgaacctgaa
aagaaggaagaagaggaaccggaacctgaagaaccagaggcctgcttcactgatgactgt
gtgaccaagtggccatgtttgacggtggataccaccagtggcaaaggcaaagaatggtgg
aatcttagaaaaacttgcttcaccatagtggaacacgactggtttgaaaccttcatcatt
ttcatgatcctccttagcagtggggctctggcctttgaagatatatacatagaaaggcga
cgaaccatcaaaataattcttgagtttgcagacaaggttttcacctacatttttgtcatt
gagatgctcctgaaatgggttgcgtatggcttcaagacctacttcaccaacgcttggtgt
tggttggactttttcattgtggatatttccttgattagcttagttgcaaattggatgggc
tactccgatcttggtccgatcaagtcgctgagaaccctcagagcactgaggcctcttcga
gcgctatcgagatttgaaggcatgagggtggtggtgaatgctcttgttggagcgattccc
tccatcttcaatgtcctgctggtgtgcctgattttctggcttatcttcagcatcatgggc
gtcaatttgtttgcggggaagttctaccgttgcatcaacaccaccacagaggagctattc
cctatgaccgaggtcaacaatcgaaccgagtgcttggcccttgaagaagccacacgggag
gctcgctggattaacgtcaaaatcaactatgacaatgttgggaaaggctacctctctcta
cttcaagtggcaacttttaaaggttggatggacataatgtatgctgccgtggactcaaga
gaggttgaggagcaaccatcctacgaaatcaatctttacatgtacatatattttgtgatc
ttcatcatctttggttccttcttcaccctaaacctcttcatcggtgtcattattgacaat
ttcaaccaacaaaagaaaaagtttggagaccaagacatttttatgactgatgaacagaaa
aaatactatgaggccatgaagaaactcggttccaagaagccacaaaagccaattccacga
ccaatgaacccgatccagggcattgtgtttgatttcatcagccagcagttttttgacatc
ttcattatggttctaatctgcctcaatatggtgaccatgatggtggaaacagacgaccaa
agcccagaaaaagaggattttctctttaaattaaacgtggccttcattgttgtcttcacc
ggagagtgtgtattgaagctcttcgcgttgcggcagtacttctttaccaacggatggaac
gtttttgatttcattgtggtcatcttgtcaatagctggtacaatgctctcagacataatt
gagaagtattttgtatctccaactctcttcagagtgatcagactagccaggattggcagg
attctgcgccttattaagggagcgaagggcattcggacacttctctttgccttgatgatg
tcccttcctgccctgttcaacattggtctcctgctttttctgatcatgttcatcttttcc
atatttgccatgtcaaattttgcctacgtcaagaaagaagctggaattgatgacattttt
aactttgagacctttggtggtagcattatctgcttgtttcagattacaacatctgctggt
tgggatgggcttctacttccaatgctgaacagggaacctccagactgtgaccctgaattt
gagaacccaggcacagatgtgaagggtaactgcggaaacccgggtatgggtatgatgttc
ttctgcagctacatcatcgtttcgttcttagtggtggtcaacatgtacattgccatcatc
ctggagaacttcaatgtggctcaagaagagagcggtgacccactttgcgaggaagacttt
gagatgttcaatgaaacctgggagaagtttgacttggacggaacaatgtttatcgagtac
agtcgactttcagatttttgcgacactttgcaggagcctctcagggtcgccaaacccaat
cggcttcgtctgattggaatggatctgcccctggttattggggataggatccactgcttg
gatgttttgatggctgttacacagatggtactgggagatacagtggagatggcagcaatg
cgggatagcatcgaggctaagttcattcttagcaaccccacaaaagactcctttgcacca
attaccacaacggtacgccacaaggaagagcaacaagctgctgtggtccttcaacgagct
tatcgtaatcatcttctgaagcgctgcgtacgccacgctgcttatatgcacagactgaag
aggattggcagaaattacaacgatgatgatccacctgaaaaagaggggctccttgcacga
agactgggagttctctatggaactaatatagaccttgctgatgaaatggagcttgaggct
ttagaacctctgacaagccaagaaccttttaatacagactgcgaaagggcccaatatctt
caggagcctcctgtgcagaatacgattgtggttcctgctgaaataaccagtgaggagtta
ttgcattctgcccccaaccaagaacccttacccttacaagcaaatctgagagagccgctt
gtatga
DBGET
integrated database retrieval system
