Poecilia mexicana (shortfin molly): 106921908
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Entry
106921908 CDS
T08022
Name
(RefSeq) LOW QUALITY PROTEIN: otoferlin-like
KO
K19949
otoferlin
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmei04131
]
106921908
Membrane trafficking [BR:
pmei04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106921908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
106921908
NCBI-ProteinID:
XP_014849394
LinkDB
All DBs
Position
Unknown
AA seq
1943 aa
AA seq
DB search
MVLQKVAEEGHLELTDTLIDDNNMSIKTSVTIDIRYQPMDGTGGMWSDGEFLDVPDDRDG
LFAFETDSLLSGQSHGSGTSPGRSLQGSIPTFRKAGRGVFSAMKLGKAKSSKDDHKRGDE
PAILEMEDLDKKAMRLAGMLEPDTISLASVTAVTTNVSNKRSKPDIKMEPSSGRPVDYQI
SITVIEARQLIGLNMDPVVCVEVGDDKKYTSMKESTNCPYYNEYFVFDFHVPPDVMFDKI
IKLSVIHSKNLLRSGTLVGTFKMDVGTVYSQPEHQFYHKWAILSDPDDITAGCKGYVKCD
IAVVGKGDNIKTPHKANETDEDDIEGNLLLPEGIPAERQWARFYVKIHRAEGLPKMNTSI
MANVKKAFIGENRDLVDPYVQVQFSGQKGKTSVQKSSYEPIWNEQVIFTELFPPLCKRIK
VQIRDSDKVNDVAIGTHFIDLRKISNDGDKGFLPTLGPAWVNMYGSTRQYTLMDEHQDLN
DGLGEGVSFRARLLISVAVEILDTTSPEIICSTDVQVEPVSNISESATGKMEEFFLFGSF
LEATMIDRKIGDKPISFEITIGNYGNHIDGVSKSSSVKKKKKEGENQEEENELIQNSSED
EADEDADLTSVSSTPPMKPFITDRNYFHLPYFEKKPCVYIKSWWQDQRRRLYNSNMMDKI
ADKLEEGLNDVQEVIKTEKAFPERRLRGVLEELSIGCSRYVTLANKDVNLAGRTKLDRER
LKSCMREMDSMGQQAKQIRTQVKKNTVKEKLKLAQNFLQRIRFLADEPQHSIPDVFIWMM
SNNKRIAYARIPSKDILYSVVDEETGKDCGKVKAVFLKLPGKKGFGPAGWTVQAKLELYL
WLGLNKSRKDFLHGLPNGFEEIRATKMGHGLPPVTLVYDMKQVFQLRAHMYQARSLFAAD
SSGLSDPFARVFFSSQSQVTEVLNETLCPTWDQLLVFDDVELFGEATELRDDPPIIVVEF
YDQDTVGKAEFIGRTFAKPTIKMRDEPYGPPRFPPQLEYYQIYRGNSIAGELLAAFELLQ
VGQGGRADLPPLEGPTDSERGPILPVXXXLGIRPVLSRYRIEVLFWGLRDLKRINLAQVD
RPRVDIECAGRGVQSALIQNYKKNPNFSTLVKWFEVDLPENELLHPPLNIRVVDCRAFGR
YILVGSHAVSTLRHYIYSPPDKSCNNWATAAKLMNGYMVLTNGCSQARSSPSLSSRTFSR
PAGDVSVSLEAEPPIRKMDTVVKLDAMSDAVVKVDMNEDESDKEKKKKKKKKKGGVEEEE
ETDERVLDWWSKYFASIETLKENLRSQEAAQAEAEEREDLEIAAEAADIRPDDLHLKGSK
MKERFKEKKSSKQKRSQAADGSEKRPPKARVDELVVYNRELESEYGNFEDWLHTFNLYRG
KAGDDDEHALDDDRIVGRFKGSLCMYKVPLSQEITREAGYDPNMGMFQSIPHNDPIHVLV
RVYVVRATDLHPADINGKADPYVVIKLGKSEVKDKENYISKQLNPVFGKSFDIEATFPME
SMLTVSVYDWDLVGTDDLIGETKIDLENRFYSKFRATCGIASNYSMHGYNIWRDPMKPSQ
ILAKLCKEGKIDGPHYGPGGKVKVANRIFTGPTEIEDENGLKKQTEEHLALSVLNHWEEI
PRVGCKLVPEHVETRPLLNLDKPGIEQGRLEMWVDMFPMDMPAPGPAIDISPRKPKRYEL
RVIIWNTDEVILEDDDYFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRFV
FPFDYLVAEEKIVISKKESMFSWDETEYKIPPRLTMQVWDADHFSADDFLGAIELDLNRF
PRGAKTAKQCNLDMIRNEQELPTISIFKQKRVKGWWPFVARDENDEMELTGKVEAELHLV
TAEEAEKSPVGLGRNEPDPLEKPNRPDTTFLWFLSPLKAIRYLVCNRYKWLIIKIVLALL
LLIMIGLFLYSMPGYLVKKLLGA
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atggtgcttcagaaagtggctgaagagggacatctagagctgacagataccctcattgat
gacaacaacatgtcaataaagaccagtgtcaccatagatataagataccagccgatggat
ggcacaggggggatgtggagcgatggagagttcctggatgtccctgatgaccgtgatggg
ttgtttgcttttgaaacagacagcttgctttcaggacagagccacgggtcagggacttct
cctggacggtcattacaggggtccataccaaccttcagaaaagcagggagaggagttttc
tcagccatgaaacttggcaaggcaaaaagctcaaaagacgaccataaaagaggagatgaa
ccagccatcctggaaatggaagatctggataagaaagccatgcgtcttgctggaatgctg
gagccggacaccatatctttggcctcggtgactgctgtcacaactaacgtttccaataaa
aggtcaaagccggatatcaagatggaaccgagctccgggaggcccgttgattatcagatc
agcatcacagtgattgaggctcggcagctaataggcctgaacatggatcctgtggtgtgt
gtggaagttggcgatgacaagaaatatacatccatgaaggagtccaccaactgtccgtac
tataatgagtattttgtcttcgatttccacgtcccaccagacgtcatgtttgacaagatc
atcaagctctcggttattcattctaaaaaccttctaagaagcgggacgttggtgggaacc
tttaagatggacgttgggacggtttactctcagcctgaacaccagttctaccacaaatgg
gccatcctgtctgaccctgatgacatcacagcggggtgcaaaggatatgtaaagtgtgac
attgcagttgtcgggaaaggtgataacatcaagacgccgcataaagccaatgagacggat
gaggacgacatagaaggaaatctgctcctcccagaaggcatcccagcagagaggcaatgg
gcgagattttatgtgaagatccacagagctgagggacttccgaaaatgaacaccagcatc
atggcgaatgtgaaaaaggcctttatcggagagaacagagaccttgtcgacccctatgtt
caagtgcaattttctgggcaaaagggaaagacttcggtccagaagagcagctatgaacca
atctggaacgagcaagtcatcttcacagagctgttccctcctctttgcaagaggatcaag
gtgcagattagagactcggataaggtcaatgacgttgccataggaacccacttcatcgat
ctacggaagatctcaaacgatggtgataaaggcttcttgcccaccctgggtccagcctgg
gtcaacatgtacggctccactcgtcagtacactctgatggacgagcaccaggacctaaat
gacgggctcggcgaaggcgtgtccttcagagcacgcctccttatctccgtagccgtggag
atcctggacactacgtcgcctgaaatcatctgctcaaccgacgttcaggtggagcctgtc
tccaacatctcagagagtgccacagggaaaatggaggagttcttcttgtttggttcgttt
ctggaggctactatgatcgacaggaagattggtgacaaaccgataagttttgaaatcaca
ataggaaattatggcaaccacattgacggtgtgagcaaatcctcctctgtgaagaagaaa
aagaaggaaggagagaatcaggaagaggaaaatgagctgatccaaaactccagcgaggat
gaggctgatgaagacgcggacctcacctcagtctcctcgactcctcccatgaagcctttc
atcacagacagaaactacttccatctaccctactttgaaaagaagccatgtgtctacatc
aagagctggtggcaggatcagaggagacggctttataattcaaacatgatggataagatt
gcagacaagttggaagagggcttaaatgatgttcaagaggtcattaagacagagaaggcc
tttccggagcgcagactcaggggagttctggaggagctcagcattggctgcagtcggtat
gtgacacttgccaacaaagatgtgaacctggcaggcagaactaagcttgatcgagaacgg
ctcaagtcatgcatgagagagatggacagcatgggacagcaggccaaacagattcgcaca
caagtgaaaaaaaacacggtcaaagaaaaactcaagctggcgcagaacttcctgcagagg
atccgtttccttgccgacgagcctcagcacagcatcccagatgttttcatctggatgatg
agtaacaacaagcgcatcgcctatgcccgaattccttccaaagacattctgtactctgtg
gtggatgaagaaactggcaaagactgtggaaaagtcaaagcagtcttcctcaagctgcct
ggtaaaaaggggtttggccctgctggctggacagttcaggctaagctggagttatatctg
tggctcggcctcaacaagagccggaaggacttcctacatggtctcccaaatggtttcgaa
gagatcagagccaccaaaatgggccacgggcttcctccagtcaccctcgtctacgacatg
aagcaggtgtttcagctccgagctcacatgtaccaggcccgcagtctgtttgcggctgac
agcagtgggctttcagaccccttcgctcgggttttcttctcctcacaaagccaggttact
gaggttctaaatgagacgctctgccccacgtgggaccaactgctggtgtttgatgatgtc
gagctgtttggagaggctactgagctcagagacgaccctccgatcattgttgttgagttt
tatgaccaagacactgtgggtaaggcagagtttataggtcggacgtttgcaaagcccact
attaagatgcgtgacgagccttacggacccccgaggttccccccgcagctggagtattac
cagatatacagagggaacagcattgcaggagagctgctggctgctttcgagctactgcag
gttggtcaaggaggcagggctgatcttcctccccttgaagggccgacggactcggagcgt
ggacccatcctccctgttnnnnnnnncctgggcatacgtcccgtcctgagtcgctaccgc
atagaggtattattctggggattaagggacctgaaaaggatcaatttggcccaagttgat
cgaccccgggtggacatcgagtgtgcaggtcgaggagttcaatctgccctcattcagaac
tacaagaagaatcccaacttcagcaccctggtcaaatggtttgaagtggacctgccagaa
aatgagcttctccatcctcctcttaacatccgggtggtggactgcagagcattcggacgc
tacatcctggtggggtcccacgctgtttccactctcagacattatatctacagtcctcca
gacaaaagctgcaacaattgggccactgcagctaagctaatgaatggctacatggttcta
accaatggctgctcccaagctcgctcctcacccagcctttcttcccgcaccttctctcgt
cccgcaggtgacgtctccgtcagcctagaagccgagcccccaatccgaaagatggacaca
gttgtcaagttggatgctatgtctgatgctgttgtaaaagttgacatgaacgaagacgag
agtgacaaagaaaaaaagaagaagaaaaagaagaagaagggaggagtagaggaggaggaa
gagacggatgagcgagtgctggactggtggtccaagtattttgcctccattgagacgctg
aaggagaacctcagatcccaggaagcagctcaagcagaggcagaggagagagaagacctc
gagatagcagctgaggcagcagatatcagacccgacgacctccacctaaaaggctccaaa
atgaaagaaaggttcaaagagaagaagagctccaagcagaagaggagtcaagctgcggac
ggctcagagaagcggccccctaaagcaagagtggatgagctagtggtgtacaacagagag
ctggagagtgagtatggcaactttgaggattggcttcacacgttcaacttgtacagagga
aaagcgggagatgatgacgaacacgccctggatgatgacaggattgtaggcagattcaag
ggctctttatgtatgtacaaagtaccactttctcaggagatcacaagagaagctgggtat
gatcccaacatggggatgttccagagcattccgcataacgaccccatccacgttcttgtc
cgcgtctatgtggtcagggccacagaccttcatccagctgatatcaatgggaaggccgat
ccatacgtcgtcattaagctgggcaaatcagaagtcaaagacaaagagaactacatctcc
aagcagctcaaccctgtgtttggcaaatcctttgacattgaagccaccttccccatggag
tcgatgttgacagtgtctgtgtatgactgggatttggtcggcacagacgacctgattgga
gaaacgaagattgacctggagaatcggttttacagcaaattcagagccacgtgtggcatt
gcgtccaactattctatgcatggttacaacatttggcgcgaccctatgaaacccagccag
atcctagctaagctctgcaaggaagggaagattgatggacctcattatgggccgggaggc
aaagtcaaagtcgcgaatcgaatctttactggaccaacagaaatagaggatgaaaatggt
ctgaagaagcaaacggaggagcatttagccctgagcgtgttgaaccactgggaggagatc
ccgagagtcggctgcaagctcgttcccgaacatgtggagaccagacctcttctgaacctg
gacaaacctggaatcgaacagggccgacttgagatgtgggtggacatgtttccgatggac
atgcccgctcctgggcctgcaattgacatatcaccacggaaaccaaagagatatgagctc
agggtgattatttggaatactgatgaagtaatactggaagacgatgattacttcactggg
gaaaagtccagtgacatatttgtgaggggatggctgaaagggcagcaggaagacaaacag
gacacagacgtgcattaccactccctaactggtgagggcaacttcaactggcgcttcgtc
ttcccgttcgattacctcgtggctgaagagaagatcgtcatctctaagaaagagtccatg
ttctcctgggacgagactgaatacaagatccctcctcgtctcacgatgcaggtctgggac
gccgaccacttttctgctgatgactttctcggggctattgagctggacctgaacaggttc
ccccgcggcgcaaagacagccaagcagtgcaacctcgacatgatccgaaatgaacaagaa
cttcccaccatttctatcttcaagcagaaaagggtcaaaggctggtggccttttgtggca
cgtgatgagaacgacgagatggagctcacaggtaaagttgaggctgagcttcaccttgtc
actgcagaggaagcagagaaaagtcctgtgggactggggagaaatgagccggacccactg
gagaaaccaaatcgcccagacaccaccttcctgtggttcctgagcccgctgaaagccatc
cgctacctggtgtgcaaccgctacaagtggctgatcatcaagatcgtgctggccctgctg
ctgctcatcatgatcggcctcttcctctacagcatgccaggctaccttgtcaagaagctg
ctgggagcttag
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integrated database retrieval system
