Poecilia mexicana (shortfin molly): 106924628
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Entry
106924628 CDS
T08022
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmei04515
]
106924628
Cell adhesion molecules [BR:
pmei04515
]
Cadherins
Protocadherins
106924628
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
BppU_N
Motif
Other DBs
NCBI-GeneID:
106924628
NCBI-ProteinID:
XP_014853929
LinkDB
All DBs
Position
Unknown
AA seq
859 aa
AA seq
DB search
MECTGRGIMWNKLSRWQVLLWWHNFFILWSTIDAQTRYSIPEELKQGSVVGNIARDLGLL
VPELFRRKMRITSEAGKQYFNVDLGKGELLVTDRIDREELCGQRPSCLLPLELVIDNPLQ
VHRVEIEIQDTNDHSPSFLTKEKVVKIAELVNPGARFPLESATDPDVGANSVRTYLISKN
EHFKLTVKNLKDGRKIPELVLEKALDRETQAVHNLILTAVDGGDPVRSGTSEIKVIVLDI
NDNAPQFEKQIYEANVSERSAIGTEILQVKASDADEGLNGQIEYVFAEQTSDIILSLFDI
NPSTGLITVKGVLDHESDSLHRFDVTAKDKGNPEMDGHCGVEIKINDVNDNNPEIVVTSL
TTPVPEDSAIGTVIAIISTRDADSGDNGKVTLTLSPKSQFKLNPSISKHFSLVTNGPLDR
ETNSQYSVKITASDSGKPPLTSEKTIIVQILDVNDNPPVFSQSSYAVYVKENNAPGLMLC
SVSASDLDSGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQV
QAKDQGSPSLSSNATVHVFILDQNDNTPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVT
AVDADSGHNAWISYRLAEATDASLFTVNQYTGEVRTKRAVYEQDDSSQRLLIEIKDDGQP
VQSATATVSILLEDGLHEPILDLRHKMSEPSKKTGRITLYLILSLASVSVLSLVTFLILA
VKCIRGTRSSGSCCMRRSDCDDYKNPSRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFRSC
MSPMSEYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSEFKVGHGVSKNMKCL
NVLSTVNRSMIVKTENILL
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtacgggacgtggaataatgtggaacaaattgtcaagatggcaggtgcttttg
tggtggcataatttctttatcttgtggagtacaatagacgcacagactcgctacagcatt
cccgaggagctgaaacagggatccgtggtgggaaatatagccagagatttgggtttgctc
gtacctgaactgtttcggcgtaaaatgcggataacctcggaggctggtaagcaatatttt
aatgtagacttgggaaagggagagctgctggtgaccgacagaatagacagggaggaactg
tgtggacaaagaccgtcctgtttgctgcctttggaactggttatagataacccgctgcag
gtgcacagggttgaaattgaaatacaggatacgaacgaccattcccctagttttcttact
aaagagaaagtggtgaaaatagcagagttagtaaatccaggtgcgcggtttccattagag
agtgccactgatcctgatgtcggtgctaattctgtgcgcacgtatctcattagcaaaaat
gagcattttaaattgacagttaaaaatcttaaagatgggaggaaaattcctgaactggtg
cttgaaaaagctcttgatcgagagacgcaggctgtacacaacctcattctcacagctgtg
gatggaggagatccggtgcgttcagggacatcagaaataaaagttatagtgctcgatatc
aatgataatgcgccgcaatttgaaaaacaaatatatgaagctaatgtcagcgaaaggtct
gcgattggaaccgaaatcctgcaggttaaagcttcagatgcagatgaaggactgaatgga
caaatagaatatgtgtttgcggagcaaacttcagatataattttatccttatttgacatc
aacccgtccactgggcttattactgtcaaaggggttttagaccatgaatcagattcttta
cacagattcgatgtaactgcgaaagacaaaggaaatccggaaatggatgggcattgtgga
gtggaaatcaaaataaatgacgtcaatgacaataatccagaaatagttgttacctcttta
acaacacccgtacccgaagactctgcaattggaacagtcattgcaatcataagcacaaga
gacgcagactcaggtgacaatgggaaagttacattaactttgtcacccaaatcacagttt
aaattaaacccatcgatctcaaaacatttttcactagtaacaaatggcccactagaccgt
gaaacaaacagccagtatagtgttaagataaccgcttctgattctggaaaaccgccatta
acaagtgaaaaaacaataatagttcaaattttagatgtaaatgacaatccacctgttttc
tctcaaagttcgtatgcagtttatgttaaagaaaacaatgctccagggttaatgctgtgc
tcggtatcagcgtctgatctggattctggtgaaaacgcaaagatctcttactccatactg
gactctaaagtgcaggacgtctctgtctcgtcttatgtttacattaactcagataacggg
agcatctacagcatgcactcgtttgactacgagaagctgaaagtgtttcagattcaggtt
caggcaaaggaccagggctctccctctctcagcagcaacgccactgtccatgttttcatc
ctggaccagaacgataatacccccgctgttatttacccctcctccgctgccctgggctcc
ctctctcatcagaggatgccccgctccgctaaagcgggtcacctggttaccaaggtaacg
gccgtggacgctgactcgggccataatgcctggatctcgtacagactagcggaggccaca
gacgcctctctgttcaccgtcaatcagtacacaggagaggtgaggactaaacgcgctgtg
tacgagcaggacgattcctctcagaggctgctgatagaaatcaaggacgacgggcaaccg
gttcagtccgccacagccacggtgtccatcttgctggaggacggtctccatgaacctatt
ttagacctccgacacaaaatgtccgaacccagcaagaaaaccggcagaatcaccctttat
ttgattctgtctctggcctcagtgtccgtgctgtctttggtgacttttctcatcctggcg
gtgaaatgcatcaggggcaccagaagcagcgggagctgctgcatgagaaggagcgactgt
gatgattacaagaaccccagcagaaacctgcagattcagctcaacactgatggacctata
aaatacgtggaggtcctgggaggagacatgatgtctcagagtcagtcgttcaggtcctgc
atgtctccgatgtcagagtacagtgattttacattgatcaaacccagcagtaccacagac
tttaaagaagtcatcagtgttctggacgcgtctttacctgacagcacctggacctttgag
agccagcaggtgagcgaattcaaagttggccacggtgtgtcaaaaaatatgaaatgtttg
aatgttttatcaactgttaatcgttctatgatagtcaaaactgaaaacattttgctttaa
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