Poecilia mexicana (shortfin molly): 106924632
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Entry
106924632 CDS
T08022
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmei04515
]
106924632
Cell adhesion molecules [BR:
pmei04515
]
Cadherins
Protocadherins
106924632
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
BppU_N
Motif
Other DBs
NCBI-GeneID:
106924632
NCBI-ProteinID:
XP_014853932
LinkDB
All DBs
Position
Unknown
AA seq
822 aa
AA seq
DB search
MRMTKRKEHRDWRWQALWWHHFFLLWNTIHGQTRYSIQEELKRGSVVGNLAKDLGLGLSD
IFERKLRVPSEAGGQHFSVDVGKGELVVNDRIDREALCGQSASCILPLQVVIEDPLQLHR
IEVEIRDINDNSPIFLSNEISLYIAESAAVGTRFPLESAGDPDVGSNSLKSYTLSKNDCF
SLKIKEIEGGKAAPELYLEKTLDREKMSVHKILLTALDGGNPVRSGTTQITINVLDINDN
FPVFEKNLYKISLGEKSLKGIVIIKPKATDADEGSNGEVEFSFGPRTPPSVLSAFDIHPL
TGEITLKGDLDYETVKSYDIDVIAKDKGSPQMEGHCRVQVDITDFNDNAPEIVFTSQPKP
VREDAPSGTVVALISAKDLDSGDNGKVTLHLAKGPPFNLKPSFSNNYALVTSGNLDRERA
SDYNIEITATDSGTPQMSSTKTIHVSITDVNDNPPSFSQSSYNVYLKENGLPGSILYSVS
ASDQDSGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQVQAK
DQGSPSLSSNATVHVFILDQNDNTPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVTAVD
ADSGHNAWISYRLAEATDASLFTVNQYTGEVRTKRAVYEQDDSSQRLLIEIKDDGQPVQS
TTATVSILLEGGLHEHILDLRHKMSEPSKKTGRITLYLILSLASVSVLSLVTFLILAVKC
IGGSRSSGSCCMRRSDCDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFRSCMSP
MSEYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVS
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgacaaagaggaaagaacaccgagactggagatggcaggcgctttggtggcat
catttctttcttctatggaatacaatacatggacaaactcgttacagcatacaagaggag
ctgaaacggggatctgtggttggaaatcttgcaaaagatctgggtttgggattatcggac
atttttgagcgtaaactacgtgtcccctcggaggctggtgggcagcatttcagcgtggat
gtggggaagggcgagttggtggtgaatgacagaatagacagagaggctttatgtggacaa
agcgccagctgcatattgcctctgcaggttgtaatcgaggatccgctacagttgcatcga
attgaagttgaaattagagatattaatgacaattctccaattttcctttcaaacgagatt
tctttatatatagccgaatcggcggctgttggtacgcgctttcctttagagagcgcaggg
gaccctgatgttgggagcaattcacttaaatcttatacactcagtaaaaacgactgcttc
tccctgaagataaaagaaatcgagggtggcaaggctgccccggagctctatttggagaaa
actcttgaccgagagaaaatgtctgttcacaaaatattgctgacagcgttagacggagga
aatcctgtgcggtctggaactacacaaataactataaatgttcttgatattaatgataat
tttccggtgtttgagaaaaacttgtacaaaatatctttgggtgaaaaaagtttgaaagga
atagttattattaaacccaaagcgacagatgcagacgaaggctcaaacggtgaagttgaa
ttttcatttgggcctcgcacaccgccttctgtgctgtcagcctttgatattcacccttta
acaggtgaaataactctgaaaggggatttagactatgagacagttaagtcatatgacatt
gatgtcatcgcaaaggacaaaggcagtcctcaaatggaaggccactgccgtgtccaggta
gacatcactgattttaatgataacgccccagaaattgtttttacttctcagcctaaacct
gtgcgcgaagacgcgccaagcggcactgtggttgctttgataagtgcaaaagaccttgac
tccggcgataacggtaaagtaactctacatctcgccaaaggtcccccttttaatctgaag
ccttcattttctaataattatgcgctggttaccagcggtaatttagacagagagagggca
tctgattataatattgagataaccgccactgattcaggtactccacaaatgtccagcacg
aaaactattcatgtcagcatcactgatgtaaatgacaaccctcctagtttttctcagtcg
tcctataatgtgtatttaaaagaaaacggattaccgggatctatactttattcagtatca
gcatctgatcaggattctggtgaaaacgcaaagatctcttactccatactggactcgaaa
gtgcaggacgtctccgtctcgtcttatgtttacattaactcagataacgggagcatctac
agcatgcactcgtttgactacgagaagctgaaagtgtttcagattcaggttcaggcaaag
gaccagggctctccctctctcagcagcaacgccactgtccatgttttcatcctggaccag
aacgataatacccccgctgttatttacccctcctccgctgccctgggctccctctctcat
cagaggatgccccgctccgctaaagcgggtcacctggttaccaaggtaacagccgtggac
gctgattcgggccataatgcctggatctcgtacagactagcggaggccacagacgcctct
ctgttcacagtcaatcagtacacaggagaggtgaggactaaacgcgctgtgtacgagcag
gatgactcctctcagaggctgctgatagagatcaaggacgacgggcaaccggttcagtcc
accaccgccacggtgtccatcttactggagggcggtctacacgaacacattttagacctc
cgacacaaaatgtccgagcccagcaagaaaaccggcagaatcaccctttatttgattctg
tctctggcctcagtgtccgtgctgtctctggtgacttttctcatcctggcggtgaaatgc
atcgggggcagcagaagcagcgggagctgctgcatgagaaggagcgactgtgatgattac
aagaaccccaacagaaacctgcagattcagctcaacactgatggacctataaaatacgtg
gaggtcctgggaggagacatgatgtctcagagtcagtcgttcaggtcctgcatgtctccg
atgtcagagtacagtgatttcacattgatcaaacccagcagcaccacagactttaaagaa
gtcatcagtgttctggacgcgtctttacccgacagcacctggacctttgagagccagcag
gtgagctaa
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