Poecilia mexicana (shortfin molly): 106924634
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Entry
106924634 CDS
T08022
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmei04515
]
106924634
Cell adhesion molecules [BR:
pmei04515
]
Cadherins
Protocadherins
106924634
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
BppU_N
Motif
Other DBs
NCBI-GeneID:
106924634
NCBI-ProteinID:
XP_014853935
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MTKTIGYRGWRWKAVWWQRFFLLWTTIEAQTRYAIPEELKPGSVVGNLAKDLGLSLSEIF
DRKLRVASEAGEQYFSVDAGKGELVVNERIDREALCGQSASCVLPLQLVIENPLHLHRLE
VEIKDINDNSPVFQAKELSLKIAESAAVGTRFLLETAEDLDVGVNSVKSYTLTRNECFTL
KMKDVNGGGAVPELVLEKALDREKTAVHKLKLTAVDGGNPPLSGTSQIVITVLDNNDNFP
VFEKNIYTVSLLESTVKDTSVIKITATDADEGSNGEIEFSFGSRTPESVLSIFEIQSSTG
EIYLKGQLDYEKATSYKIEISAKDKGVPEMESYCHLQIDVLDINDNIPEIVLTSEPQPVR
EDAPSGTVVALLNARDADSGNNSKVTLQSNKGSPFALKPSFSNNYALVTSGPLDREKFSE
YNIEITASDSGSPPLSSKKVIPVTIIDVNDNPPIFSQTSYNVYLKENGVPGSILYSVSAS
DLDSGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQVQAKDQ
GSPSLSSNTTVHVFILDQNDNTPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVTAVDAD
SGHNAWISYRLAEATDASLFTVNQYTGEVRTKRAVYEQDDSSQRLLIEIKDDGQPVQSAT
ATVSILLEDGLHEPILDLRHKMSEPSKKTGRITLYLILSLASVSVLSLVTFLILAVKCIR
GTRSSGSCCMRRSDCDDYKNPSRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFRSCMSPMS
EYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVS
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagacaataggataccgaggctggagatggaaagcagtttggtggcagcggttc
tttctcctgtggactacaatagaagctcaaacacgttacgccattccagaggaactaaaa
cccggatctgtggtcgggaatctcgccaaagatttgggtttgtcattatctgagattttt
gaccgtaagctgcgggtcgcctctgaggctggcgagcagtatttcagcgtggatgcgggg
aagggcgagctggtggtgaatgagagaatagacagagaggctctgtgcggacaaagcgcc
agctgtgttttacctttgcaacttgttattgaaaaccccttacatttacaccgactggag
gtagaaattaaagatattaatgataattcccccgtgtttcaagcgaaagagctgtctttg
aaaattgcagaatcggcagcagtaggaactcgctttcttttggaaaccgcggaggattta
gacgtaggtgttaattctgtcaagtcttacactttgacaagaaatgaatgcttcacactg
aaaatgaaggatgttaatggtggcggagcagttccggagttggtgttagaaaaggctctt
gatcgtgagaagacagctgttcataagctcaaattgacagcagtagatggggggaatcca
cccctttccggtacctcacaaattgtaattactgtgcttgataataatgataattttcct
gtgtttgaaaaaaatatctacacagtctctctactagagagcactgtcaaggatacatca
gtaattaaaattactgctacggatgcagacgagggatctaatggggaaattgaattttca
tttggttccagaaccccagagtccgtcttatccatatttgaaattcagtcatcaacagga
gaaatatatttgaaaggacaattggattatgaaaaagccacgtcatataaaatagaaata
tctgcgaaagacaaaggagttcctgaaatggaaagttactgtcatttacagatagatgtt
ttagacattaatgacaatatacctgaaattgttctcacctctgaaccgcagcctgtgcgg
gaagacgcaccaagcggtacagtagttgctttgcttaatgcacgtgatgctgactctggt
aataacagtaaagttacgctgcagtcaaataaaggctctccttttgcccttaaaccttcg
ttttctaataattatgctctggttacaagcggccctttggatagagaaaaattctcagag
tataatatcgagataacagccagtgattcgggttctcccccactttctagtaaaaaggtt
ataccagtaaccatcattgatgtgaatgacaatcctccaattttcagtcaaacctcctat
aatgtgtatttaaaggagaacggagtacctggttcgatactttactctgtatcagcgtct
gatctggattctggtgaaaacgcaaagatctcttactccatactggactctaaagtgcag
gacgtctctgtctcgtcttatgtttacattaactcagataacgggagcatctacagcatg
cactcgtttgactacgagaagctgaaagtgtttcagattcaggttcaggcaaaggaccag
ggctctccctctctcagcagcaacaccactgtccatgttttcatcctggaccagaacgat
aatacccccgctgttatttacccctcctccgctgccctgggctccctctctcatcagagg
atgccccgctccgctaaagcgggtcacctggttaccaaggtaacggccgtggacgctgac
tcgggccataatgcctggatctcatatagactggcggaggccacagacgcctctctgttc
accgtcaatcagtacacaggagaggtgaggactaaacgcgctgtgtacgagcaggatgac
tcctctcagaggctgctgatagagatcaaggacgacgggcaaccggttcagtccgccacc
gccacggtgtccatcctactggaggacggtctccatgaacccattttagacctccgacac
aaaatgtccgagcccagcaagaaaaccggcagaatcaccctttatttgattctgtctctg
gcctcagtgtccgtgctgtctctggtgacttttctcatcctggcggtgaaatgcatcagg
ggcaccagaagcagcgggagctgctgcatgagaaggagcgactgtgatgattacaagaac
cccagcagaaacctgcagattcagctcaacactgatggacctataaaatacgtggaggtc
ctgggaggagacatgatgtctcagagtcagtcgttcaggtcctgcatgtctccgatgtca
gagtacagtgatttcacattgatcaaacccagcagcaccacagactttaaagaagtcatc
agtgttctggacgcgtctttacctgacagcacctggacctttgagagccagcaggtgagc
taa
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