Poecilia mexicana (shortfin molly): 106930609 Help Entry 106930609         CDS       T08022                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism pmei  Poecilia mexicana (shortfin molly) Pathway pmei04115   p53 signaling pathway pmei04145   Phagosome pmei04148   Efferocytosis pmei04350   TGF-beta signaling pathway pmei04510   Focal adhesion pmei04512   ECM-receptor interaction pmei04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:pmei00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     106930609   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     106930609  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     106930609    04148 Efferocytosis     106930609   09143 Cell growth and death    04115 p53 signaling pathway     106930609   09144 Cellular community - eukaryotes    04510 Focal adhesion     106930609   09142 Cell motility    04820 Cytoskeleton in muscle cells     106930609  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pmei04131]     106930609   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:pmei00536]     106930609 Membrane trafficking [BR:pmei04131]  Endocytosis   Phagocytosis    Opsonins     106930609 Glycosaminoglycan binding proteins [BR:pmei00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    106930609 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC EGF_3 TSP1_ADAMTS EGF_CA cEGF EGF TSP1_CCN Motif Other DBs NCBI-GeneID:  106930609 NCBI-ProteinID:  XP_014863737 Ensembl:  ENSPMEG00000016754 UniProt:  A0A3B3XH60 LinkDB All DBs Position Unknown AA seq 1172 aa AA seqDB search MMLCGIFFLLMLWSCDGARLAESRDDNSVYDLFELARVSKRHNGVSLVKGADPYSPAYKV LNADLIPPVPDASFRDLLDSIQAERGFLLLLNLKQSKKTRGSLLTVEKTDGSGPIFEIIS NGKANTLDLVYSTERQLQVVSIEDAGLANGHWRNLTLFIQDDRAQLFVGCEEINVSELDV PIQTLLSRELADRARLRIGKGAVKDKFMGVLQNVHFVFGTSLDAILTNKGCKSGAALTQM MTLDNPVNGSSPAIRTDYTGHKSKDLQTVCGFSCEDITSMFKELRGLNVIVKQLSNELQK VSTDSELLKNQIIIRNEVCIHNGIEYNDKDEWTVDGCTECTCQNSATICRKISCPLIPCA NATVPDGECCPRCGTPSDFPEGGWSAWSDWTHCSVTCGRGIQQRGRSCDRINSKCEGTSV QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVMTQIRLCNSPTPQMGGRDCQGEG RHTKVCQMSPCPINGEWGPWSPWDTCSATCGGGVQTKNRLCNDPMPKYGGKDCIGDATMV QICNKQDCPIDGCLSNPCFPGTKCTSFRDGSFECGKCPLGYTGDGITCTDIDECKEVPDA CHTHNGIHRCENTEPGYNCLPCPSRFSGPQPFGRGVEQATAKKQVCTPRNPCKDGSHNCH KNANCIYLGVYSESMFRCECKPGYAGNGRICGEDSDLDGWPNTDLPCVENATYHCKKDNC PNLPNSGQEDHDKDGLGDECDQDDDNDGIPDDRDNCPRVYNPAQYDADRDDVGDRCDNCV FEANTDQTDTDNNGEGDACAVDIDGDGILNENDNCPYVYNVDQRDTDRDGVGDHCDNCPL EHNPDQVDSDSDRIGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDDKDNCRLAFNPDQLDSDGDGRGDICKDDFDQDNVLDIHDVCPENFEISETDFR RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFSAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYTVMWKQITQTYWSHTPTRAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGDTAGQVRTLWHDPKNIGWKDFTAYRWHLTHRPKTGLIRVVMYEGKRIMADSGNI YDKTYAGGRLGLYVFSQEMVYFSDLKYECRDT NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgatgctgtgtggcatcttttttctgttgatgctttggagttgcgatggtgccagattg gcagagagtcgggatgataacagtgtgtatgacctatttgagctggcgagggtgagcaaa agacacaacggagtgagtctagtcaaaggcgcagacccttacagtcccgcatacaaggtc ctgaacgcagacctgatccccccagtccccgacgcctccttcagggacctcctcgactcc atccaggccgagcggggattcctcctactacttaacctgaagcagtccaagaaaactaga ggcagcctgctgacagtcgagaagaccgacggatctggccccatcttcgagatcatttct aacgggaaggcgaacactcttgatctggtctactccaccgagaggcagctgcaggtggtg tccatcgaagatgccggcttggccaatgggcactggaggaacctcacgttgttcatccag gacgacagggcacagctttttgtgggctgtgaagagatcaatgtgtcagagctggacgtg ccaatccaaactttactgtccagggagttggcagatagagcccgactcaggattggaaag ggggcagtaaaggacaagtttatgggagtcctccagaatgtccattttgtctttggaacc tctctagatgccatactgaccaataagggatgtaaaagtggagctgcattaacccaaatg atgaccctggacaacccagtcaatggttccagtcctgccattagaaccgattatactggc cacaaatccaaagatctccagactgtctgcggtttctcatgtgaggatattaccagtatg tttaaggagctcaggggactcaatgtgattgttaagcagctgtcaaatgaactccaaaaa gtgtccactgatagcgagttactgaaaaatcagatcatcatccgcaatgaagtctgcatc cataacggcattgagtacaacgacaaagatgaatggacagtggatggctgcacagagtgc acctgtcagaactctgcaaccatatgtcgcaaaatctcctgtcctctcatcccctgcgcc aatgccactgtgcccgatggggaatgctgcccacgctgtggaacaccgagtgactttccc gagggtggttggtctgcctggtctgactggacccattgttctgtgacttgtggacgtgga atccagcagcgtggacgctcctgtgaccgcatcaacagcaagtgtgagggcacctctgtc cagacccgtgactgctacccacaggaatgcgacaagcgcttcaagcaggatggaggctgg agccactggtcgccctggtcttcatgctctgtgacctgtggcgaaggggtcatgacacag atccgtctctgcaactcccccacaccgcagatgggtggcagagactgccaaggagaggga cgtcacaccaaagtctgccaaatgtcgccctgtcctattaatggagaatggggaccttgg tcgccatgggatacctgctctgcaacctgtggtggaggagtccaaacaaaaaaccgtctc tgcaatgaccccatgcctaaatacggaggaaaagattgcattggcgatgctaccatggtt caaatctgcaacaaacaggactgccctattgatggttgcctttccaacccatgcttccct ggcacaaagtgcaccagcttccgtgatggctcatttgagtgtggcaagtgcccacttggc tacactggtgatgggattacctgcacagacattgatgaatgcaaagaggtcccagatgct tgccatactcacaatggaatccatcgttgtgagaacactgagccaggttacaactgcctc ccctgtccttcccgtttctctggtccccaacctttcggaagaggcgtggaacaggcaact gctaaaaagcaggtgtgcactccccgcaatccgtgcaaggatggtagccacaactgccat aaaaatgcgaactgcatatatttgggcgtctactccgagtcaatgttccgttgtgagtgc aagccaggatatgccgggaatggtcggatttgtggagaggacagtgacctggatggatgg cctaacactgatctgccgtgtgtggagaacgccacttatcactgcaaaaaggataactgc ccgaaccttcccaactctggccaggaagaccatgacaaagatggccttggggatgaatgt gaccaggatgatgacaatgatggaattcccgatgatagggataactgtccaagagtgtac aaccccgcccagtatgatgcagacagggacgatgttggtgaccgctgtgacaactgtgtg tttgaggctaatactgatcaaacagacacagacaacaatggagagggagatgcctgtgct gtcgacattgatggtgatggtattctgaatgagaatgacaactgcccatatgtgtacaat gttgaccagagagacacagacagggatggtgttggagatcactgtgataactgtcccctc gagcacaacccagaccaggtagactctgactcagaccgtattggagacaagtgcgacaac aaccaggacattgatgaggatggtcaccagaacaacttggataactgcccatacattccc aatgccaaccaggccgaccatgacaaagatggcaaaggtgatgcttgcgaccatgatgac gacaatgacggcattcctgatgataaagacaactgccgattggcttttaaccctgatcag ctggactctgatggtgatggccgtggagatatttgcaaggatgattttgaccaagacaat gtcctggacatccatgatgtttgccctgagaactttgagatcagtgaaacagacttccgc agattccagatggttcccctggatcccaaaggcacctctcagattgaccccaactgggtg gtgaggcatcaaggcaaggagctggtgcagactgtcaactgcgatcccggcattgctgtt ggttatgatgagttcagtgccgtggatttcagtggaacgttcttcatcaacacggacaga gatgatgactatgccgggttcgtgtttggctaccagtcgagctcccgcttctacacagtg atgtggaaacagatcacacagacttactggtcccacacacccaccagagctcaaggctac tctggcttgtcaatcaaagttgtaaattccaccacagggcctggcgaacacctcagaaac gctctgtggcacaccggagacactgcaggacaggtccgtactctgtggcacgaccccaag aacattggctggaaggactttaccgcctatagatggcacctaactcacagacccaagact ggacttattagagtggtcatgtatgaaggcaagagaatcatggcggattctggaaacatt tatgataagacatatgctggtgggcgactaggcttgtatgtcttctctcaggagatggtt tacttctcagacctcaaatatgaatgtagagatacataa

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