Poecilia mexicana (shortfin molly): 106933459
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Entry
106933459 CDS
T08022
Symbol
smcr8
Name
(RefSeq) Smith-Magenis syndrome chromosomal region candidate gene 8 protein
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106933459 (smcr8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmei04131
]
106933459 (smcr8)
Membrane trafficking [BR:
pmei04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
106933459 (smcr8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
106933459
NCBI-ProteinID:
XP_014868214
Ensembl:
ENSPMEG00000009900
UniProt:
A0A3B3YH00
LinkDB
All DBs
Position
Unknown
AA seq
960 aa
AA seq
DB search
MTVCASAASHASLSNNTMIGSPDVVAFTKEDEYGQTSQDPLDLPEEFSIPLYPLSDSNPW
AKTSYAKFTKDFILISEFSEQVGPQPLLTIPGDPKVCGTFDLNYFSLRIMSVDYQASFVG
HPPGSGYPRLSFVEDSRVVLGDSKEGAFAYVHHFTLYDLEARGFVRPFCMAYVAADEKKI
MLQFQELSLRFSQASECLKAGNRRAFAKELQRKLQDLEYTHSVLQREEGLQREAGPQCVY
SAHAVEKANELANVEKSIYEHRDLLKQISAYHRRPRRDPHAVSCQKCMNECLRECEELLD
KYAKLANPLGYSQRVPKGEGDEIQSDENREEEEVDEDDVEGIKRRPSYTPQLIKAKSAKC
FDKRLKTLQELCEENFYEATVELLKETERSFRGDLCYLYTRRLDKALRRKQKIVNFLFEA
DIIDDVEDEAETLRPFCAVNHAIDNYMHLNPPHIVLGSEALELDGLKPQGPLGLACEAAT
TQELGLLGSHLDSSPSDQTLETQESSEGTKESFSSDKSGTDQTEKQESLASINTEGPDPD
SDLTPEPDQNTYPERESSSEDMETTAGEDDCDTGQDQTPVSLLEVVSELEARKDDGCEMG
THSELLVPMDTACCMAQEGFLYEAADPDAVPYLSPNSTLNPKKVLVVNQEPHALHPVQDE
YTVGSPCSEGPPAGLELPVSVFGDAASRSSMEDGSDCTMSASTGSDRAASPLGYGGSVTL
RQRKKAGQGALRFVRQYSFAMQALWCLLSGRTLVVLGADEGRVRRLVSALALFVPNPGKS
GERVQPWLSCPFTLVDLHRWKLIGLQRVASPTGSSALYSLSRYSRYISILDADMKTLRCP
QYRGQLLANMADHRTYIRRGSTYFLHLQSVLCRLAARAFLLTFTHHLHLPVSPTEGPEAV
EARRQGFLQEQLGLDEEDGQILLYLSRLIAQRYLQPANSDDCRAVPCFSFNYVTSVLYKI
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgactgtttgtgcttctgctgcttctcatgcctccctcagtaataacactatgataggc
tccccagatgtggtagctttcactaaagaggacgaatatgggcagacaagtcaagaccct
ctggatctcccggaggagttctccatacccctctacccgctttcagactccaatccctgg
gccaagacctcctacgccaagttcaccaaagacttcatcctcatctcggagttctcagag
caggtgggcccccagcctctcctcaccatcccaggtgatcccaaagtctgtggcaccttc
gacctcaactacttctccctgcggatcatgtccgtggactaccaggcctccttcgtgggg
catccgcctggcagcggctacccgaggctcagctttgtggaggactccagggttgtcctg
ggagactcgaaggagggagcgttcgcatacgtccatcacttcaccctgtacgacctggag
gcgcggggcttcgtgcggccgttctgcatggcgtacgtagcggcagacgagaagaaaatc
atgctccagtttcaggagctgtccctccgcttctcacaggcctcggagtgtctgaaggcc
gggaacagaagagcattcgccaaggaactccaaaggaagctccaggacctggagtacacc
cactctgtgctgcagcgggaggagggcctgcagagagaggcggggcctcagtgtgtttac
tctgcccatgctgtagaaaaagccaatgagctggccaacgtggagaagagcatttacgag
catagagaccttctgaagcagatcagtgcctaccatcggcgaccacggcgggatccgcac
gccgtctcgtgccagaagtgcatgaacgagtgcttgagagagtgcgaggagctgttggac
aaatacgccaagctggcaaatcccctcggttacagccaaagggtccccaaaggagaaggc
gacgagattcaatccgatgaaaacagagaggaagaagaggtggatgaagacgatgtagag
ggtattaaacgcaggccatcatacacgccacagctgatcaaagccaagtctgcaaagtgt
tttgacaaacgcctgaagaccttgcaagaactgtgcgaggagaatttctacgaggccacc
gtggagcttctgaaggagacggagaggagtttccgcggcgacctgtgttacctctacact
cgccgcctggacaaggcactgcgcaggaagcagaaaattgtcaacttcctgtttgaggca
gatatcattgatgacgttgaggatgaagccgagacactgagaccattctgcgctgtgaat
catgccatagacaactacatgcacttgaatccacctcatatcgtcctggggtcagaggct
cttgagcttgatggattaaaacctcaaggtccgctaggcctggcttgtgaagccgccact
actcaggagcttggacttctgggaagccatctggactcctctccctcagaccagaccttg
gagacacaggagagctcagaagggaccaaagaaagctttagcagcgataaaagtggaaca
gatcaaaccgagaagcaagagagtcttgcaagtataaatacagaaggtcctgatccggac
tctgacttgacaccagaacccgaccaaaacacctatccagagagggaaagcagtagcgag
gacatggagaccactgctggggaggatgactgtgataccggacaagaccagacccccgtg
tctttgctggaagtcgtgtccgaactggaggccagaaaggatgacgggtgtgagatggga
acgcactcggagctgctggttcccatggatacagcttgctgtatggcccaagagggtttc
ctctatgaggcagctgaccctgacgctgtgccttacctgagtccaaactctaccctgaat
ccaaaaaaggttctggtggtcaaccaggagccccacgcccttcatcccgtccaggatgag
tacacagtgggttccccgtgctcagaaggtccaccagcagggctggagcttcccgtgagc
gtctttggagacgcagcttctcgtagctccatggaggacgggtcggactgtaccatgagt
gcttccacgggctccgaccgggccgcctcgccgcttggctacggggggtcagtgaccctc
cgtcagaggaaaaaagccgggcaaggcgctttgaggttcgtgcgccagtactcttttgca
atgcaagccctgtggtgtctgctgagcggcaggacgctggtggtgctcggggcggacgag
gggagagtccgccgcctcgtgtctgctctggcgctcttcgtacccaaccctggcaagagt
ggagagagggtccaaccctggctgtcctgtcccttcaccctcgtcgaccttcacaggtgg
aaacttattgggctgcaaagggttgcttctcccaccggctccagcgccctctactccctg
tcccgctacagccgctacatctccatcctggatgccgacatgaagaccctgcgctgccct
cagtaccgcggccagctcctcgccaacatggccgaccaccgcacctacatccgccgcggc
tccacctacttcctccacctgcagagcgtgctctgccgcctggcggccagggcgttcctg
ctcaccttcacgcaccacctccacctgccggtcagccccacggaggggcccgaggcagtg
gaggcccggcggcagggcttcctccaggagcagcttgggctggacgaggaggacggccag
atcctgctctacctcagccggctcatcgctcagcggtacctgcagcccgctaacagcgac
gactgcagagccgtaccgtgttttagttttaactacgtcaccagcgttttatataaaatc
tga
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