Pseudodesulfovibrio methanolicus: V8V93_05900
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Entry
V8V93_05900 CDS
T10565
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pmen Pseudodesulfovibrio methanolicus
Pathway
pmen01501
beta-Lactam resistance
pmen01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pmen00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
V8V93_05900
01503 Cationic antimicrobial peptide (CAMP) resistance
V8V93_05900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmen03036
]
V8V93_05900
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmen02000
]
V8V93_05900
01504 Antimicrobial resistance genes [BR:
pmen01504
]
V8V93_05900
Chromosome and associated proteins [BR:
pmen03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
V8V93_05900
Transporters [BR:
pmen02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
V8V93_05900
Antimicrobial resistance genes [BR:
pmen01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
V8V93_05900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND_2
BSH_CzcB
HH_EMRA
BSH_CusB
YknX_C
HH_YBHG
Prot_ATP_ID_OB_N
HH_CzcB
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
WWX23735
UniProt:
A0ABZ2IYI6
LinkDB
All DBs
Position
complement(1261719..1263011)
Genome browser
AA seq
430 aa
AA seq
DB search
MMALRRVKEECALQILSIYSRFATGRVAYVPLLLLSLLVLGGLAGCEDKTPKASATQAPV
EVGIEVLHPKSVPLTTELPGRTSASLVAEVRPQVDGILRERLFREGSEVQAGEVLYRVAP
STYQAEYSNALAALKKAQASLPSSESKAKRYAELIGQGAISEQDYQDAKAVYESDLAAIA
SAKAALESAKISLDYTDIRAPISGRVEMSDLTPGALVTANQSAPLTTIRQLDPINVDLTQ
SSTTMLNLRQAITSGAITVEGKTMKVKLKLENGTIYPYEGTVEFSGAKVDESTGTYTLRA
EFPNPDRLLLPGMYVRAIIEDGVFQNGYLVPQMAVGRTPRGEATALFVDKDNKVQRRILN
VRGSHGNSWLVGSGLKDGDRLIIQGSQSVRPGQVVTVQEMVVDDATGEIKPVSAATSSAT
EAPATAAKES
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgcttcgacgcgtcaaggaggaatgcgcattgcagatcctgtccatatattcc
cgtttcgcaacgggccgtgtagcttatgtcccgttgctcctgttgagcctgctggtcctt
ggagggcttgccggctgcgaggacaaaacccccaaggcctcggccacccaggctccggtc
gaggtcggcattgaggtcctgcacccgaagtccgtgcccctgaccaccgagcttccgggc
aggaccagcgcctcgctggtggctgaagtccgcccccaggtggacggcattctccgcgag
cggctgttccgcgaaggcagcgaggtccaggccggcgaagtgctctaccgggtcgcgccc
tcgacctaccaggcggagtacagcaacgccctggccgccctcaagaaggcgcaggcctcc
ctgcccagctccgaaagcaaggccaagcgctacgccgaactgatcggccagggggccata
tccgagcaggactaccaggacgccaaggccgtgtacgagtccgacctggccgccatcgcc
tcggccaaggccgccctggagagcgccaagatcagcctggattacaccgatatcagggcc
cctatcagcggccgcgtggagatgtccgacctgacccccggcgcgctggtcaccgccaac
cagagcgcgccgctgacgaccatccggcagctcgatcccatcaacgtggacctgacccag
tcgagcaccaccatgctcaaccttcgccaggccatcacctcgggcgcgatcaccgtcgag
ggcaagaccatgaaggtcaagctcaagctcgaaaacgggaccatctatccctatgagggg
accgtggagttctccggggccaaggtggacgagtccaccggcacctacaccctgcgcgcc
gaattccccaaccccgaccggctcctgttgcccggcatgtacgtccgggccatcatcgag
gacggcgtgttccaaaacggctacctggtgccccagatggccgtcggccggacccccagg
ggcgaagccacggccctgttcgtggacaaggacaacaaggtccagcgacgcattctcaac
gtgcgtggcagccacggcaactcctggctggtcggttccggcctcaaggacggcgaccgc
ctgatcatccagggttcccagtccgtccgcccgggccaggtcgtgaccgtccaggagatg
gtcgtggacgacgccaccggcgagatcaagcccgtttccgccgccacatcctccgccacc
gaagctcccgctaccgcagccaaggaaagctag
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