Paramacrobiotus metropolitanus: 129581047
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Entry
129581047 CDS
T09028
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129581047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmeo03041
]
129581047
Spliceosome [BR:
pmeo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
129581047
Complex C
U5 SnRNP specific factors
129581047
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
jr-ZPR1
Motif
Other DBs
NCBI-GeneID:
129581047
NCBI-ProteinID:
XP_055327870
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MDLDLYDEFGNYIGPELADDDEEPEREEVPEDDFDEEPAENGIRGSELARAMDIDDDEAI
PRNQIVLHEDKKYYPSAEEIYGPDVETIVHEEDAQPLTVPIIEPVKHKKFSMLEKEIPET
TYKLDFMLDLMENPELIRNIAIAGHLHHGKTNLLDCLIEQTHPTLIKKDERDIRYTDTLI
TEIERGVTIKSKPVTLVLNDSRGKSWVMNIMDTPGHVNFADEVCAAFRICDGVLLVVDAH
EGVLLNTERIVKLALQERLPIVLCINKIDRLILELKLPPTDAYFKIRHIIDEVNSLIQTY
SEDPDQQLLSPVYGNVCFASPQYSLCFTLKSFSKIYLDLFGEGFDHEEFGKRLWGDVYFN
AKTRRFQKKPLQTGQSRSFIEFVLEPVYKIIAQVVGDVDVALDGLMDHLGISLTKEEQKT
NIRPLLRIVFQKFIGEFSGFVDMCIKHIQSPLQNARNKIGQTYSGPLDSYVVKSMVRCDP
GGPLMVHTVKNYSTQDASSFHILGRVFSGTLMENQQIKILGEHYSSHDEEDSRVLTAGKL
WIHESRYKIQVEKATPGCWVLIEGIDEPIVKTSTITDPFQDDDEECFIFRPLRFNAASII
KIACEPVNPSELPKMLDGLRKVNKSYPLLSTKVEESGEHVVLGTGELYLDCVMHDLRKMY
SEIDIKVADPVVTFCETVVETSSLKCFAETPNKRNKITMVAEPLDKGLADDIETQVVSIG
WPAKRLGEFFQTKYNWDLLAARSIWAFGPENNGPNILVDDTLPSEVDKTMLSEIRESVKQ
GFQWAAREGPLCEEPIRNVKFKILDAVVAQEPIARGGGQIIPTARRVAYSAFLMATPRLM
EPYLYVEAIAPADCVSPLYTVLGRRRGHVTSDAPLPGSPLYTIKAFIPAIDSFGFETDLR
THTQGQAFCQSVFHHWQIVPGDPMDKSIIIKPLEPQPAPHLAREFMLKTRRRKGLSEDVS
INKFFDDPMLLELAKQDYGLSYAL
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggatctggatctatatgatgaatttgggaattacattggcccggaattggcagatgac
gatgaagaaccagaaagggaagaagttccggaggacgatttcgacgaggagcccgctgag
aatggaattcgtggtagcgagcttgccagggccatggatatcgatgatgatgaagcgata
ccgcgaaatcagatcgtccttcacgaagataaaaaatattatccttctgcggaagaaatt
tatggacctgacgttgagaccattgtccacgaagaggatgctcaacccctcactgttcct
attattgagcccgtcaagcataagaagttctccatgttggagaaggaaatccccgaaacc
acctacaaactcgactttatgctggatctcatggagaacccggaattgatccgcaatatt
gccattgcgggccacctgcatcacgggaagactaatctcctcgattgtttaattgaacaa
acacaccccaccctgatcaagaaagacgagcgcgatattcggtatacggacacactgata
accgagatcgaacgcggggtgaccattaagagcaagccagtgacgctagtgttgaatgac
agccgtggaaagtcctgggtgatgaatatcatggacacaccgggacatgtcaacttcgcc
gacgaagtctgcgccgcattccgtatttgcgacggggtattgctggttgttgatgcccac
gaaggagttttactgaacacggagcgcattgtaaaactggccttacaagaacgattgccg
attgttttgtgcatcaacaaaattgatcgcttaattctcgaactaaaactccccccaaca
gatgcatatttcaaaattcgccacatcatagacgaagtgaattccctcattcagacgtac
tctgaagatcctgatcagcagctactatcacctgtgtacgggaacgtgtgttttgccagt
ccacagtacagtctgtgcttcacgttgaaatcattttccaagatttacctggatttgttc
ggcgagggttttgatcatgaggaatttgggaagcgtttgtggggtgatgtctatttcaat
gcgaagacgcgccgcttccaaaaaaagccgttgcaaacggggcagtcgcggagttttatc
gaatttgtcttggaacctgtgtataagatcattgcgcaagtggttggggatgtggatgtg
gcgctggatgggttgatggatcatttgggaataagtttaacgaaggaagaacagaaaacc
aatatccggcctctgctgcgaattgttttccaaaaattcattggtgaattttcaggtttt
gtggacatgtgtatcaagcacattcagtcgccgctacaaaatgctcggaataaaatcgga
cagacatattccggccctttagattcttatgtcgtgaagtccatggtgcgctgcgatcct
ggcgggccgttaatggtacacaccgtgaagaattattccacccaggacgcttcgagtttt
cacatcctgggccgcgttttcagtggtacactgatggaaaatcagcagattaaaatctta
ggagaacattattcctctcatgatgaagaggattcacgtgtgctaactgcggggaaactg
tggatccatgaatcgaggtataaaatccaagtggagaaggccacgccaggttgctgggtt
ctgattgaaggtattgatgagcccattgtaaaaacttccaccattaccgacccatttcag
gacgatgacgaagagtgttttattttccgtccgttgagattcaacgcagcgtccattata
aagattgcatgtgaaccggtaaatccttcggaacttccgaagatgttggatggtttgcgg
aaagtgaataagagctatccgcttctcagcacgaaagtagaggaaagcggcgaacatgtc
gtcctgggcaccggcgagctgtatctggactgcgtcatgcacgatctcagaaaaatgtat
tccgaaattgatattaaagttgcagaccccgtcgtgacattttgtgaaactgttgtggag
acgtcgtcgttgaagtgttttgcggaaactcccaataagcgtaataaaatcactatggtt
gccgagccactggacaaaggactagcggatgatatcgagacacaagtggtgtccattggt
tggccggcgaaacgactgggggaatttttccagaccaaatacaactgggatcttctggct
gcacgcagtatttgggctttcggtcccgaaaataatgggccgaatattttagtggatgac
actttaccttccgaagtggacaagaccatgctcagtgaaatccgagaaagtgtaaaacag
ggcttccagtgggctgctcgagaagggccgctgtgcgaagagccgattcggaatgtcaaa
ttcaaaattctggacgcagtggtggcccaggaaccgattgcgcgcggtggtgggcagatt
attcctaccgcgcggcgggtggcctactcggcattccttatggcaacgccgcgcttaatg
gaaccatatctatatgttgaagccatcgctcccgccgactgtgtatctcctttatatacc
gttttaggacgaagacgaggtcacgtgacatccgatgctccactgccgggttccccgttg
tatacaatcaaggcatttatcccggctattgattcctttggctttgaaacggatctgaga
acccacacccagggccaagcgttctgtcaaagtgtatttcaccactggcagattgttccg
ggtgatcccatggacaagagtatcatcatcaagcccctcgaaccacaaccggcgccgcat
ttggcacgggaattcatgctaaagacccgtcgacgcaagggcctgagtgaggatgttagt
atcaataaatttttcgatgatcctatgttactggaactggccaaacaagactacggtctg
agttatgcgctataa
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