Pseudoxanthomonas mexicana: H4W19_09435
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Entry
H4W19_09435 CDS
T06805
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pmex
Pseudoxanthomonas mexicana
Pathway
pmex00300
Lysine biosynthesis
pmex00550
Peptidoglycan biosynthesis
pmex01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmex00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
H4W19_09435
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
H4W19_09435
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmex01011
]
H4W19_09435
Enzymes [BR:
pmex01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
H4W19_09435
Peptidoglycan biosynthesis and degradation proteins [BR:
pmex01011
]
Precursor biosynthesis
Amino acid ligase
H4W19_09435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QND78627
UniProt:
A0ABX6R710
LinkDB
All DBs
Position
complement(1986342..1987826)
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AA seq
494 aa
AA seq
DB search
MRRMMALAELLPDVDVPRDIVVRGLTLDSRSVQPGDAFVAIAGFGAHGLNFAAQAKENGA
SAILFEPPVPDGLEAPRDAIAVPGLRARMGAMADRFHAAPSHDMKMVGVTGTNGKTSTVQ
LLAQAWHLRGIRCATVGTLGAGMYGEVVPTGFTTPLVLQMHALLAQFRDAGAKAVAMEVS
SHALDQGRVDAVHFDVGVFTNLTRDHLDYHGDMERYGAAKSLLFFRPGLKAGVVNLDDAY
GRDLFARLPHGVQRIGVSSRGQADASVRADALRLDGNGIGFDLVIGDEVQPVQSRLLGRF
NVDNLLAVAGALRALGDSTADIARTLSRLAPIHGRMNRLGGDTDAAGVRRPLVVIDYAHT
PDALEQALASLRDHVQGRLLCVFGCGGDRDTGKRPQMAAIAERLADVVVVTDDNPRTEDG
DVIVADIMAGFAKPAAVLVQRDRAQAIAQAVAQAGPEDIVLVAGKGHEPYQEIHGVKHPF
DDTAVARHALEDRR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggatgatggccctggccgaactgctgcccgacgtggacgtgccgcgcgacatc
gtggtgcgcggactgaccctggacagccgcagcgtgcagccgggcgacgccttcgtggcg
atcgccggcttcggcgcgcacggactgaacttcgcggcacaggcgaaggagaatggcgcc
agtgccatcctgttcgagccgccggtgccggacggcctggaagcgccacgcgacgcgatc
gcagtgccgggcctgcgcgcccgcatgggcgcgatggccgaccggttccacgccgcgccc
tcgcacgacatgaagatggtcggggtgaccggcaccaacggcaagacgtccacggtgcag
ctgctggcgcaggcctggcacctgcgcggcatccgctgtgcgacggtcggcacgctgggc
gccggcatgtatggcgaggtggtgccgaccggcttcaccacgccgctggtgctgcagatg
catgcactgctggcgcagttccgcgatgcgggcgcgaaggcggtggcgatggaagtcagt
tcgcatgcgctggaccagggccgcgtcgacgccgtgcatttcgacgtcggcgtattcacc
aacctcacccgcgaccacctggactaccacggcgacatggagcgctacggcgcggccaag
tcgctgctgttcttccgccccggcctgaaggcgggcgtggtcaacctggacgatgcctac
ggtcgcgacctgttcgcccggctgccgcacggcgtgcagcgcatcggcgtgagttcgcgc
gggcaagccgatgccagcgtacgcgcggacgccctgcgtctggacggcaacggcatcggg
ttcgacctggtgatcggcgacgaggtgcagccggtgcagtcgcgcctgctgggccgcttc
aacgtggacaacctgctggccgtcgccggtgcactgcgcgcgctgggcgacagcaccgcc
gacatcgcgcgcacgctgtcgcggctggcgccgatccatggccgcatgaaccggctgggg
ggcgataccgacgcggccggcgtccgccgtccgctggtggtgatcgactacgcgcacacg
ccggatgcgctggagcaggcgctggccagcctgcgcgaccacgtgcagggccggctgctc
tgcgtgttcggctgcggcggcgaccgcgataccggcaagcgtccgcagatggccgccatc
gccgaacgcctggcggatgtggtggtggtcaccgacgacaacccgcgcaccgaggacggc
gacgtcatcgtggccgacatcatggccggcttcgcgaagccggctgccgtgctcgtgcag
cgcgaccgcgcgcaggccatcgcgcaggctgtcgcccaggcgggtccggaggacatcgtg
ctggtggccggcaagggccacgagccttaccaggaaatccatggcgtgaaacacccgttc
gacgataccgcggtggcgcgccacgccctggaggaccgtcgatga
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