KEGG   Ectopseudomonas mendocina NK-01: MDS_1452
Entry
MDS_1452          CDS       T01473                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
pmk  Ectopseudomonas mendocina NK-01
Pathway
pmk03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pmk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MDS_1452
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmk03400]
    MDS_1452
Enzymes [BR:pmk01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     MDS_1452
DNA repair and recombination proteins [BR:pmk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     MDS_1452
 Prokaryotic type
     MDS_1452
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S HHH_5 RecR_HhH DUF2400 HHH_8
Other DBs
NCBI-ProteinID: AEB57483
LinkDB
Position
complement(1593859..1594497)
AA seq 212 aa
MNAAKRLEIFRRLHEDNPEPKTELAYSTPFELLVAVTLSAQATDVSVNKATAKLFPVANT
PEAIYALGVEGLSEYIKTIGLYNSKAKNVIEACRILIEKHGSVVPDNREDLEALPGVGRK
TANVVLNTAFRQLAMAVDTHIFRVSNRTGIAPGKNVVEVEKKLLKFVPKDYLLDAHHWLI
LHGRYVCTARKPRCGACRIEDLCEYKAKTSDD
NT seq 639 nt   +upstreamnt  +downstreamnt
atgaacgcagccaagcgcttggaaatcttccgccgcctgcacgaagacaaccccgagccg
aaaaccgagctggcctacagcacgccattcgagctgctggtggcggtgacgctttctgcc
caggccaccgacgtcagcgtcaacaaggccacggccaagctgtttcccgtggccaatacg
ccggaggccatctacgccctcggcgtcgagggactttccgagtacatcaagaccatcggc
ctgtacaacagcaaggcgaagaacgtcatcgaggcctgccgcatcctcatcgagaagcac
ggcagcgtcgtgccggacaaccgcgaggatctcgaggcactgcccggcgtcggtcgcaag
accgccaatgtggtgctcaacaccgcatttcgccagttggccatggccgtggatacacac
atcttccgcgtcagcaaccgaaccggcatcgcgccgggcaagaacgtggtcgaggtggaa
aagaagctgctcaagttcgtgcccaaggattatctgctcgacgcgcaccactggctgatc
ctgcacgggcgctacgtctgcaccgcgcgcaaaccacgctgcggtgcctgccgcatcgaa
gacctgtgcgagtacaaggcgaaaacctccgacgattga

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