Ectopseudomonas mendocina NK-01: MDS_1996
Help
Entry
MDS_1996 CDS
T01473
Name
(GenBank) isopropylmalate isomerase small subunit
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk00290
Valine, leucine and isoleucine biosynthesis
pmk00660
C5-Branched dibasic acid metabolism
pmk01100
Metabolic pathways
pmk01110
Biosynthesis of secondary metabolites
pmk01210
2-Oxocarboxylic acid metabolism
pmk01230
Biosynthesis of amino acids
Module
pmk_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
MDS_1996
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
MDS_1996
Enzymes [BR:
pmk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
MDS_1996
4.2.1.35 (R)-2-methylmalate dehydratase
MDS_1996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase_C
DUF7782
Motif
Other DBs
NCBI-ProteinID:
AEB58027
LinkDB
All DBs
Position
2203546..2204193
Genome browser
AA seq
215 aa
AA seq
DB search
MKAFTQHTGLVCPLDRANVDTDQIIPKQFLKSIKRTGFGPNLFDEWRYLDIGQPNQDNSK
RPINKDFVLNFPRYQGASVLLARENFGCGSSREHAPWALDEYGFRTVIAPSFADIFFNNS
FKNGLLPIILKDEEVDALFEQAEATEGYQLTVDLEAQTVTRPDGVQYSFEVDAFRKHCLL
NGLDDIGLTLQDQDAIKAFEAKYQQSSPWLFGAIK
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctttcacccaacacactggcctggtttgcccacttgatcgtgccaacgtcgat
accgatcagatcattcccaagcagtttctgaagtcgatcaagcgcaccggctttggcccg
aacctgttcgacgagtggcgctacctggatatcggccagccgaaccaggacaactccaag
cgtccgatcaataaggatttcgtgctgaacttcccgcgttaccagggcgccagtgtgctg
ctggctcgcgagaactttggctgcggctcctcgcgtgagcacgcgccctgggcgctggat
gagtacggtttccgcaccgtgatcgcgccgagcttcgccgacatcttcttcaacaacagc
ttcaagaacggcctgctgccgatcatcctcaaggatgaagaggttgatgcgctgttcgag
caggccgaggccaccgagggttatcagctgaccgtcgacctcgaggcacagaccgtgact
cgccccgatggcgtgcagtacagcttcgaagtcgatgccttccgcaagcactgcctgctc
aacggtctggacgacatcggcctgaccctgcaggatcaggacgcgatcaaggccttcgaa
gccaagtaccagcagagcagcccctggctgttcggcgcaatcaaataa
DBGET
integrated database retrieval system
