Ectopseudomonas mendocina NK-01: MDS_2260
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Entry
MDS_2260 CDS
T01473
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk00020
Citrate cycle (TCA cycle)
pmk00785
Lipoic acid metabolism
pmk01100
Metabolic pathways
pmk01110
Biosynthesis of secondary metabolites
pmk01120
Microbial metabolism in diverse environments
pmk01200
Carbon metabolism
pmk01210
2-Oxocarboxylic acid metabolism
Module
pmk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pmk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MDS_2260
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
MDS_2260
Enzymes [BR:
pmk01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
MDS_2260
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
AEB58291
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All DBs
Position
2464391..2467222
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AA seq
943 aa
AA seq
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MQESVMQRMWDSAHLSGGNAAYVEELYELYLHDPNAVPEEWRTYFQKLPTDGSPAADVSH
STIRDHFILLAKNSRRAQPVSAGAVSSEHEKKQVEVLRLIQAYRVRGHQAAQLDPLGLWV
RNAPSDLSINHYGLTDADLDTTFRTGELYIGKEEATLREIIGALQQTYCRTIGAEFMHIV
DSGQRHWFAQRLESVRGRPQFSAEVQAHVLERVTAAEGLEKYLGTKYPGTKRFGLEGGES
LIPMLDEIIQRSGSYGTKEIVIGMAHRGRLNVLVNTFGKNPRDLFDEFEGKKTEGLSSGD
VKYHQGFSSNVMTAGGEVHLALAFNPSHLEIVSPVVEGSVRARQDRRSDASGDKVLPISI
HGDAAFAGQGVVMETFQMSQTRGYKTGGTIHIVINNQVGFTISNPQDARSTEYATDVAKM
IQAPIFHVNGDDPEAVLFVTQLAVDYRMQYKRDVVIDLVCYRRRGHNEADEPNGTQPLMY
QQIAKQRTTRELYADALIAAGVQSNEDVQAKIDDYRTALDNGQHVVKSLVKEPNKELFVD
WRPYLGHAWTARHDTRFDLKTLQDLSAKLLEIPEGFLVQRQVAKILEDRQKMGAGGLPIN
WGFAETMAYATLLVEGHPIRMTGQDIGRGTFSHRHAVLHNQKDASTYVPLKNLYDGQPKF
ELYDSYLSEEAVLAFEYGYATTTPNALVIWEAQFGDFANGAQVVFDQFISSGETKWGRLC
GLTVLLPHGYEGQGPEHSSARLERYLQLCAEHNMQVCVPTTPAQVYHMLRRQVIRPLRKP
LVVLTPKSLLRHKLAISTLEDLAEGSFQTVIGEIDSLDPKKVERMILCSGKVYYDLLEKR
RAEGREDIAIVRIEQLYPFPEEDLAEALAPYKNLKHIVWCQEEPMNQGAWYCSQHHMRRV
ATAHKKSLFLEYAGRDASAAPACGYASMHAEQQEKLLQDAFTV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaagcgtgatgcagcgcatgtgggacagtgcccacctatccggtggcaacgct
gcctacgtggaagagctctacgagctctacctgcacgatcccaacgctgtgccagaagag
tggcgcacttacttccagaagttgccgaccgacggcagccctgcagcggatgtgtcgcat
tcgaccattcgcgatcatttcatcctgctcgctaagaattcgcgtcgcgcccagccggtc
tcggccggtgccgtcagcagcgagcacgagaagaagcaggtggaagtgctgcgtctgatc
caggcctaccgcgtgcgtggccaccaagccgctcagctcgatccgctggggctatgggtg
cgtaacgcgccgtccgacctgtcgatcaatcactacggtctgaccgacgccgatctggac
accactttccgtaccggtgaactgtacatcggcaaggaggaggcgaccctacgtgaaatc
atcggtgcgttgcagcagacatattgtcgcaccatcggtgccgagttcatgcacatcgtc
gattccggccagcgccactggttcgctcagcgtctggaaagcgtgcgtggtcgcccgcaa
ttttccgccgaggtgcaggcgcacgtgctcgagcgcgtcaccgctgccgagggcctggag
aagtacctgggcaccaagtacccgggcaccaagcgtttcggtctggaaggtggcgagagc
ttgattcccatgctggatgagatcatccagcgctctggttcctacggtaccaaggaaatc
gtcatcggcatggcccaccgtggccgtctcaacgttctggtcaataccttcggcaagaac
ccgcgcgacctgttcgacgagttcgaaggcaagaagaccgagggcctgtcctccggtgac
gtgaaataccaccagggcttctcctccaacgtcatgactgctggtggcgaagtacacctg
gcgctggccttcaacccctcgcacctggagatcgtttccccggtggtcgagggttcggtg
cgcgcccgccaggatcgtcgcagcgacgccagcggcgacaaggtactgccgatctccatc
cacggtgacgcggcgttcgctggccagggcgtggtcatggaaaccttccagatgtcgcag
actcgcggctacaagactggcggcaccatccacatcgtgatcaacaaccaggtcggtttc
accatcagtaacccgcaggatgcgcgctcgaccgagtacgctaccgacgtggccaagatg
atccaggcgccgatcttccacgtgaatggcgacgatccggaggccgtgctgttcgtcacc
caactggccgtcgattatcgcatgcagtacaagcgtgacgtggtcatcgacctggtctgc
taccgtcgtcgcggccacaacgaggccgacgagccgaatggtacccagccgctgatgtat
cagcagatcgccaagcagcgcaccacccgtgagctgtatgccgatgccctgattgcagcc
ggtgtgcagagcaacgaggacgtgcaagccaagatcgatgactaccgtactgcgctggat
aacggtcagcacgtggtcaagagcctagtcaaggaaccgaacaaggaattgttcgtcgat
tggcgtccgtacctgggacacgcctggaccgcgcgtcacgacacccgtttcgatctgaag
accctgcaggacctgtctgccaaactactggaaatcccggaaggcttcctggttcagcgt
caggtggcgaagatcctcgaagaccgtcagaagatgggcgcgggcggcttgccgatcaac
tggggcttcgccgagaccatggcctacgccacgctgctggtcgaaggtcacccgatccgc
atgaccggtcaggacatcggccgtggcaccttctcgcaccgtcatgcggtgctgcacaac
cagaaggatgcctcgacctacgttccgctgaagaacctgtacgacggtcagccgaagttc
gaactgtacgactcctacctctccgaggaagcagtgctggccttcgagtacggctacgcc
acaaccacgccgaacgcgctggtgatctgggaagcccagttcggcgacttcgccaacggt
gcccaggtggtgttcgaccagttcatttccagtggcgagaccaagtggggccgtctctgc
ggtctgaccgttctgctgccgcatggttatgaagggcaggggcctgagcacagctcggcg
cgtctggagcgttacctgcagctgtgcgccgagcacaacatgcaggtgtgcgtaccgacc
accccggcacaggtctaccacatgctgcgtcgccaggtgattcgtccgctgcgcaagccg
ctggtggtgctgactccgaagtcgctgctgcgtcacaagctggccatctcgaccctggaa
gatctggccgaaggctccttccagaccgtgattggcgagatcgattcgctggacccgaaa
aaggtcgagcgcatgatcctgtgcagcggcaaggtctactacgacctgctggagaagcgt
cgtgccgagggtcgcgaagacatcgctatcgtgcgtatcgaacagctctatccgttcccg
gaagaggatctggccgaagcgctggcgccgtacaagaacctcaagcacatcgtctggtgt
caggaagagccgatgaaccagggcgcctggtactgcagccagcaccacatgcgtcgtgtc
gccaccgcacacaagaagtcgttgttcttggagtatgccggtcgtgatgcgtcggcagcg
ccggcttgcggttatgcctcgatgcacgccgagcagcaggaaaaactgctgcaggacgcc
tttactgtttaa
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