Ectopseudomonas mendocina NK-01: MDS_3198
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Entry
MDS_3198 CDS
T01473
Name
(GenBank) glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk00220
Arginine biosynthesis
pmk00250
Alanine, aspartate and glutamate metabolism
pmk00430
Taurine and hypotaurine metabolism
pmk00910
Nitrogen metabolism
pmk01100
Metabolic pathways
pmk01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
MDS_3198
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
MDS_3198
00220 Arginine biosynthesis
MDS_3198
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
MDS_3198
Enzymes [BR:
pmk01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
MDS_3198
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_ACT3
GDH_HM3
GDH_HM1
GDH_HM2
ELFV_dehydrog
TetR_C_31
Motif
Other DBs
NCBI-ProteinID:
AEB59229
LinkDB
All DBs
Position
complement(3532724..3537565)
Genome browser
AA seq
1613 aa
AA seq
DB search
MAFFTAASKADFQHQLQAALAQHVSEQALPQVALFAEQFFGIIALEELTQRRLSDLVGCT
LSAWRMLEQFDHAKPQVRAFNPDYEKHGWQSTHTAVEILHGDIPFLVDSVRMELNRHGYS
IHTLQNSVFSVRRDQNGQLLEILPRGTQGEGVLQEALMFLEIDRCSSAAELKTLEKAIHE
VFGDVRMSVADFQPMKAKARELLAWLDRAKLKVDKTELDEIKVYLNWLLDNHFTFLGYEE
FTVVPTADGGTMVYDEQSLLGLSKRLRTGLSAEELHIEPEAVAYLREPQLLSFAKAAVPS
RVHRPAYPDFVSIRELDAKGNVIKECRFMGLYTSAVYAESVWNIPYIRRKVDVIKQRSGF
DSSAHLGKELAQVLEVLPRDDLFQTPVDDLFNTALSIVQIQERNKIRVFLRRDPYGRFCY
CLAYVPRDVYSTETRMKIQQVLMERLQATDCEFWTFFSESVLARVQFILRVDPKNKTQID
PVRLEKEVIQACRSWKDDYAGLMVESLGEAQGTNVLAEFPGGFPAGYRERFAPHSAVVDM
QHLLSLSNDKPLVMSFYQPLAQGDQQLHCKLYHADTPLPLSDVLPILENLGLRVLGEFPY
KLRRADGREFWIHDFAFTYAEGLDVDIQQLNDTLQDAFIHIVGGDAENDAFNRLVLTAAM
PWRDVALLRAYARYLKQIRLGFDLSYIASTLINHADIAKELVRLFRTRFYLARKLTADDL
EDKQQKLEQAILAALDNVAVLNEDRILRRYLDLIKATLRTNFFQADASGAAKSYFSFKLS
PRLIPEIPRPVPKFEIFVYSPRVEGVHLRFGDVARGGLRWSDREEDFRTEVLGLVKAQQV
KNAVIVPMGAKGGFVPRRMPVGGSRDEVMAEGIACYRIFISGLLDITDNLKDGEVVPPQN
VVRHDADDPYLVVAADKGTATFSDIANGIAAEYGFWLGDAFASGGSAGYDHKGMGITAKG
GWVSVQRHFRERGIDVQKDNVTVIGIGDMAGDVFGNGMLLSDTLQLVAAFNHLHIFIDPN
PDAARSFAERKRLFELPRSSWADYDSKLISDGGGIFLRSAKSITITPQMKARFDITADKL
APTELLNALLKAPVDLLWNGGIGTYVKSSKESHGDVGDKANDALRVDGRELRAKVVGEGG
NLGMTQLGRVEFGLHGGASNTDFIDNAGGVDCSDHEVNIKILLGEIVSAGDMTEKQRNKL
LAEMTDDVSELVLGNNYKQTQALSLAERRARERVGEYKRLMNALESAGKLDRALEFLPSD
EELNERATNGQGLTRPELSVLISYSKIDLKESLLKSLVPDDDYLAREMETAFPAILTEKF
GDAMRRHRLKREIVSTQIANDLVNHMGITFVQRLKESTGMSAANVAGAYVIVRDLFRLPH
WWAQIEALDYKVPAELQLQLMDELMRLGRRATRWFLRSRRNELDAARDVAHFAPRIEALV
GRLDELLEGPAREQWLARYQSFVEAGTPEELARVVAGTSHLYTLLPIIEAADVTGKDTSE
VATAYFAVGGALELSWYLQQITNLPVENNWQALAREAFRDDLDWQQRAITVSVLQMADGP
QEIEARVALWLDQHQRLVDRWKAMLAELRSATGTDYAMYAVANRELMDLAQSA
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atggcgttctttacggcggccagcaaagccgacttccagcaccaactgcaagcggccctg
gcacagcacgtgagtgagcaggcgctgccacaagtagcccttttcgccgaacaattcttc
ggcatcatcgcccttgaagagttgacccagcggcgcctgtccgacctggtcggctgcacc
ctgtcggcctggcgcatgctggagcagttcgatcacgccaagccgcaggtacgcgcgttc
aaccccgattacgagaagcatggctggcagtccacccacaccgcggtggaaatcctgcat
ggcgacatcccgttcctggtcgattccgtgcgcatggagctcaaccgccacggctacagc
atccacaccctgcaaaacagcgtattcagcgtacgccgtgaccagaatggccagttgctg
gagatcctgccgcgcggcacccagggcgagggcgtgctgcaagaagcgctaatgttcctg
gagatcgaccgctgctccagcgctgccgagctgaaaaccctggagaaggctattcacgag
gtatttggtgacgtgcgtatgagcgtcgccgacttccagcctatgaaggccaaggcacgc
gagctgctggcctggctggatcgcgccaagctcaaggtggacaagaccgagctggacgaa
atcaaggtgtacctgaactggttgctggacaaccacttcactttcctcggctatgaagag
ttcaccgtcgtgccgaccgccgacggcggcaccatggtctacgacgagcaatccctgctg
ggtctgtccaagcgcctgcgcaccggattgtccgccgaggaactgcatatcgagccggag
gcggtggcctatttgcgcgaaccgcaactgctgtccttcgccaaggctgcggtgccgagc
cgggtgcaccgcccggcctacccggatttcgtttccatccgcgaactcgacgccaagggc
aacgtgatcaaggaatgccgcttcatgggcctgtacacctcggcggtgtacgcggaaagc
gtgtggaacatcccttatatccgccgcaaggtggacgtgatcaagcagcgttccggcttc
gacagcagcgcccacctcggcaaggagctggcccaggtactggaggtgctgccgcgcgac
gatctgttccagacgccagtggacgacctgttcaataccgcgctttccatcgtgcagatc
caggagcgcaacaagatccgtgtgttcctgcgtcgcgatccctacggccgcttctgctac
tgcctggcctacgtgccgcgtgacgtctattccaccgaaacccggatgaagatccagcag
gtgcttatggagcgcctgcaggccaccgactgcgagttctggaccttcttctccgaatcg
gtgctggcgcgggtgcagttcatcctgcgcgtcgacccgaagaacaagacccagatcgac
ccggtgcgtctggagaaggaagtcatccaggcctgccgttcgtggaaggacgactacgcc
ggcctgatggtggaaagcctcggcgaagcccagggcaccaatgtactggccgagttccct
ggtggcttcccggccggctatcgcgagcgcttcgccccgcattcggcggtggtggacatg
cagcatctgctcagcctgagcaacgacaagccgctggtgatgagcttctaccagccactg
gcgcagggcgaccagcaactgcactgcaagctgtatcacgctgacacgccgctgccgctg
tccgacgtgctgccgattctggagaacctcggcctgcgtgtgctcggcgagttcccctac
aagctgcgtcgtgccgatggccgcgagttctggattcatgacttcgccttcacctacgcc
gaaggcctcgacgtcgacatccagcagctcaacgacacgctgcaggacgccttcatccat
atcgtcggcggcgatgccgagaacgacgccttcaaccgcctggtgctcaccgccgccatg
ccctggcgtgacgtggcgctgctgcgggcctatgcccgctatctcaagcagattcgcctg
ggtttcgacctcagctatatcgcctcgaccctgatcaatcacgccgacatcgcgaaggag
ctggtgcgcctattccgtacccgcttctacctcgcgcgcaagctcactgccgacgacctg
gaagacaagcagcagaagctcgaacaggccatcctggctgcgctggataacgtcgccgtg
ctcaacgaagaccgcatcctgcgtcgctacctggaccttatcaaggcgaccctgcgcacc
aacttcttccaggccgatgccagtggcgcagccaagtcctatttcagcttcaagctcagt
ccgcgcctgattccggaaattccgcggccagtgccgaagttcgagattttcgtctacagc
ccgcgtgtcgagggtgtacacctgcgtttcggcgatgttgcccgcggcggcctgcgctgg
tcggatcgcgaagaggacttccgcaccgaagtgctgggcctggtcaaggcgcagcaggtg
aagaacgcggtgatcgtgccgatgggcgccaagggcggcttcgtcccgcgcaggatgccg
gtcggcggctcgcgtgacgaggtgatggccgagggcatcgcctgctaccgcatcttcatc
agcggcttgctggatatcaccgacaacctcaaggacggcgaggtggtaccgccgcagaac
gtggtacgccacgacgccgacgacccctatctggtggtggcggccgacaagggcaccgcg
accttctccgacatcgccaacggcattgccgccgagtacggcttctggctcggcgacgcc
ttcgcctccggtggttcggccggctacgaccacaagggcatgggcatcaccgccaagggc
ggctgggtctcggtgcagcgccacttccgcgagcgcggtatcgacgtgcagaaggacaac
gtcaccgtgatcggcatcggcgacatggccggcgatgtgttcggcaacggcatgctgctg
tcggacacgctgcaactggtggccgccttcaaccacctgcacatcttcatcgatccgaac
ccggacgcggccaggagcttcgccgagcgcaagcgtctgttcgaactgccgcgttcgagc
tgggccgactacgacagcaagctgatctccgacggtggcggcatcttcctgcgcagcgcc
aagagcatcaccatcaccccgcagatgaaggcacgtttcgacatcacggccgacaagctg
gcgcccaccgagttgctcaatgccctgctcaaggccccggtcgacctgctgtggaacggc
ggcattggcacctacgtgaaatccagcaaggaaagccacggcgatgtcggcgacaaggcc
aacgatgcgctgcgcgtcgatggtcgcgaactgcgcgccaaggtggtgggcgagggcggt
aacctgggcatgacccagctcggtcgggtcgagttcggcctgcacggcggcgccagcaac
accgacttcattgacaatgccggcggcgtggactgctccgaccatgaagtgaacatcaag
atcctgctcggcgagatcgtctccgctggcgacatgaccgagaaacagcgcaacaagctg
ctggccgagatgaccgacgacgtgtccgagttggtcctgggcaacaactacaagcagacc
caggctctgtcgctggccgagcgtcgcgcccgcgagcgcgtcggcgagtacaaacgcctg
atgaatgcgctggaaagcgccggcaagctcgaccgcgcgctggagttcctgccatcggac
gaggagctgaacgagcgcgccaccaacggccagggcctgacccgaccggagctgtcggtg
ctgatctcctacagcaagatcgacctcaaggagtcgttgctcaaatccctggtgccggac
gatgactacctggcgcgcgagatggaaaccgcgttcccggcgatcctcaccgagaagttc
ggcgatgccatgcgacgccatcgcctcaagcgcgagatcgtcagcacgcagatcgccaac
gatctggtcaaccacatgggcatcaccttcgtgcaacgcctgaaggagtccaccggcatg
agcgcggccaacgtcgccggcgcctacgtcatcgtgcgtgacctgttccgcctgccgcac
tggtgggcgcagatcgaggcgctggactacaaggtgccggccgaactgcagctgcagctg
atggacgagctgatgcgcctgggccgccgtgcgacgcgctggttcctgcgcagccgccgt
aacgagctggacgccgcgcgcgacgtggcgcacttcgcgccgcgtatcgaggcgctggtc
ggccgtttggacgaactgctcgaaggcccggcccgtgagcaatggctggcgcgctaccag
agcttcgtcgaggccggtacgccggaggagctggcgcgcgtggtcgccggcaccagccac
ctgtacacgctgctgccgatcatcgaagcggcggatgtcaccggcaaggacaccagtgag
gtggcgacggcctacttcgccgtgggcggtgcgcttgagctgtcctggtacctgcagcag
atcactaacctgccggtggagaacaactggcaggcgctggcccgcgaggccttccgtgac
gatctggactggcagcagcgtgcgattaccgtgtcggtgctgcagatggctgacggtccg
caggagatcgaagcgcgcgtggccctgtggctcgatcagcatcaacgcctggtcgaccgc
tggaaggcgatgctggccgagctgcgttcggcaaccggcaccgactacgccatgtacgcg
gtagccaaccgcgagctgatggacctggcgcaaagcgcctga
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