Passer montanus (Eurasian tree sparrow): 120498281
Help
Entry
120498281 CDS
T07277
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120498281 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmoa03041
]
120498281 (EFTUD2)
Spliceosome [BR:
pmoa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
120498281 (EFTUD2)
Complex C
U5 SnRNP specific factors
120498281 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
Septin
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
120498281
NCBI-ProteinID:
XP_039556739
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDELGREAKDLDELEDDDDDDDMGEHDEEHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgacctgtacgatgagtttgggaactacatcgggcccgagctggactcggac
gatgacgacgacgagctgggccgggaggccaaagacctggacgagctggaggatgatgat
gatgatgacgacatgggcgagcacgacgaggagcaccccggcatggaggtggtgctgcac
gaggacaagaagtactaccccacagctgaggaggtctatgggcctgaggtggagaccatc
gtgcaggaggaggacacacagccactcactgagcccattatcaaacctgtgaaaaccaag
aagttctccctgatggagcagaccctgccagtcactgtctacgagatggatttcctggca
gatctgatggacaactcggagctgatccggaacgtgactctgtgtgggcacctgcaccac
ggcaagacgtgttttgttgactgcctgatcgagcagacgcacccggagatccggaagcgc
gacgaccaggacctctgctacactgatatattgttcacagagcaggagaggggggtgggg
atcaagagcaccccagtgacaattgttctgccggacaccaaaggaaaatctttcctcttc
aacatcattgacactccaggtcacgtgaatttctctgacgaggtgacagccggcctgcgc
atctcggacggcgtcgtgctcttcatcgacgcggccgagggggtgatgctgaacacagag
aggctgatcaagcacgccgtgcaggagaggctggcagtgactgtgtgcatcaacaagatt
gacagactcatcctggagctgaaactgccccccacagatgcttactacaagctcagacac
attgtagatgaagttaatggtctgatcagcatgtattccaccgatgagaacctcgtgctg
tctccccttctggggaacgtgtgcttctccagctctcagtacagcatctgcttcacactg
gggtcttttgcaaagatttatgcagacacatatggagacatcaattaccaggagtttgca
aagcggctttggggcgacatctacttcaacccgaagacccgcaagttcaccaagaaggcc
ccgaccagcagctcccagcgcagcttcgtggagttcattctggagcccctgtacaagatc
ttggctcaggtggtgggggatgtggacacaaccctgcccaggactctggatgagcttggc
atccacctgaccaaagaggagttgaaactgaacatccggcccctgctgcggctcgtctgc
aagaagttctttggggagttcacaggctttgtggacatgtgtgtgcagcacattccctcc
ccaaaagtgggggccaagacaaaaattgagcacacgtacaccggcggcgtggactccgac
ctgggggaggccatgagcgagtgcgaccctgacggtcccttgatgtgtcacacaaccaag
atgtacagcactgatgatggtgtccagttccacgcctttggcagggtgctcagtggcacc
atccatgctgggcagcctgtgaaggtccttggggagaactacaccctggaagatgaggag
gattcccagatctgcactgttggacgcctctggatctcagttgcaaggtatcacattgag
gtgaacagagttcctgctggcaactgggtgctgattgagggcgtggaccagcccatagtg
aagacagcgactgtgacagagcctcggggcaatgaggaggctcagatcttccgtcccttg
aagttcaacaccacatctgttatcaaaatagctgtggagccagtgaacccctcagagctc
cccaaaatgttggatggtctccgcaaagtcaacaagagctacccctcacttacaactaag
gtggaagagtctggggaacatgtgatcctgggaacaggagagctgtacctggattgtgtg
atgcacgacctgcggaagatgtactccgagatcgacatcaaggtggctgatccagtggtg
acattctgtgagacagtggtggaaacatcctccctgaagtgctttgctgagacacccaac
aagaagaacaagatcacaatgattgctgagcccctggagaagggattagcagaggacatt
gagaatgaagtggtgcagataacatggaacaggaagaagctgggtgaattcttccagacc
aaatacgactgggatttgctggctgcccgttccatctgggcctttgggccagatgctact
ggcccaaacatcctggtagatgacacactgccctcagaggtggacaagtctctgctgggt
tcagtgaaggacagcatcgtgcagggcttccagtgggggaccagggaagggcccctctgt
gatgaattgatccgcaatgtgaagttcaagatcctggatgcagtgattgctcaggagccc
ttgcacaggggtggagggcagatcatccccacggcccgcagggtggtgtactctgccttc
cttatggccacccctcgcctgatggagccctactacttcgtggaggtccaggcccctgct
gactgcgtgtctgccgtgtacacggtgctggcccggcgcagaggccatgtgacccaggat
gctccaatcccaggctctcccctctacaccatcaaagccttcatcccagccattgattcc
tttggctttgagacagacttgaggacccacacgcagggacaagccttctctctctctgtc
ttccaccactggcagattgtgcctggggaccccctggacaagagcatcgtcatccggccg
ctggagccgcagccagccccacacctggccagggagttcatgatcaagaccaggcgtagg
aagggcctgagtgaggacgtgagcatcagcaagttcttcgatgaccccatgttgctggaa
ctggccaagcaggacgtcgttctcaactaccccatgtaa
DBGET
integrated database retrieval system
