Passer montanus (Eurasian tree sparrow): 120498456
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Entry
120498456 CDS
T07277
Symbol
RAPGEF6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04517
IgSF CAM signaling
pmoa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120498456 (RAPGEF6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120498456 (RAPGEF6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RA
RasGEF_N
PDZ
cNMP_binding
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
120498456
NCBI-ProteinID:
XP_039557141
LinkDB
All DBs
Position
Unknown
AA seq
1691 aa
AA seq
DB search
MGSGAGRPGNAGSARQPLPRRRGAGAPRRRMSAPVEPRIKQALRKKPAERTPEDLNTIYS
FLHGLDILSHFREHQLRIMSSSARYERYKGNQVLFCSETIARCWYILLSGSVLMKDSMFL
PPCSFGKQSGGKRGCECIILEPSEMIVVENSKDNEENILQREVPLRQSRRRYRRINQRGE
RQTITDNVDSSSYVSLPADLTKMHLTDNPHPQVTHVPSSQSGCSIASDSGSSSLSDIYQA
TESEMGDVDLTGLPEAPVDSEDEEEEEDEDIDRTSDPLLGRDVVRECLEKEPADKTDDDI
EQLLEFMHQLPAFANMTMSVRRELCSVMIFEVVEQAGAIILEDGQELDSWYVILNGTVEI
SYPDGKSESLCMGNSFGITPSLDKQYMNGVVRTKVDDCQFVCIAQQDYWRILNHVEKNTH
KVEEEGEIVMVKEHRELDRSGTRKGHIVIKATPERLIMHLIEEHSIVDPTYIEDFLLTYR
TFLTSPLEVGNKLLEWFTVDSLRDKVTRVVLLWVNNHFNDFEGDPAMTRFLEEFEKNLED
TKMKGHLRLLNIACAAKAKWRQITLQKPSRDSPLFFSLLGGSDKGFGIFVETVEIGSKAA
EAGLKRGDQIMEVNGQNFENITFVKALEILKNNTHLSITVKTNIFVFKELLCRIGQEKNG
IPHIPKIAEKKNNRYSIPDMPGDVEQMFPREKGNKKMKANTVSGGRNRIRKILDKTRFSI
LPPKLFSDGSVSQSQDDSIVGTRQCRHSLAIMPIPGTLSSSSPDLLQPTTSILDFSNPSA
VGFYYIPDQVIRVFKADQQSCYIIISKDTTAKEVVSHAVHEFNLTGAPETYSLCEVSVSP
EGVIKQRRLPDQFSKLADRIQLNGRYYLKNNMETETLCSDEDAQELLRESQISLLQLSTI
EVATQLSMRDFELFRNIEPTEYIDDLYKLDSKTGNAHLKQFEDVINQETFWVAMEILAEP
NQLKRMKIIKHFIKIALHCRECKNFNSMFAVISGLNLAPVARLRGTWEKLPSKYEKHLRD
LQDLFDPSRNMAKYRNILSSQSMQPPIIPLFPVVKKDITFLHEGNDSKVDGLVNFEKLRM
IAKEIRQVVRMTSANMDPAVMFRQRKKRWRSLGSLSQGSMNSNMLDVQGGAHKKRARRSS
LLNAKKLYEDAQMARKVKQYLSNLSVETDEEKIQILSLQCEPAYSTLTKNLSERRGGKSS
EMSPVPMRSIGQTTKAHQHQQNRMSQVLQVPTVNLYPSRKKGLTKDHVTFSTGSPQKSLS
LSEEVSSKKQADDTMSMASSLHSSPPASPQGSPRKVGNIQRSDNCSQMNLSGSSSSLASE
TSNKNSGQRSYGIGYALIPSTKSDNFSDSSHSEISSRSSIVSNCSVDSMSAALQDERSLS
QSLIVVDSGGAERKEHPQALTDYGQPCPGWSITRPALIRGMAFTSSMSSEEISHEHITVE
AADSGRGSWTSCSSSSHDNFQNIPNQKSWDLLSSYRHTQLDGPIAEVEPTNCYSEEGYLY
SEAFSKANRQSKASVELDQSRQSWASSSSLSDTYETNYGTIKRRGLENSSAEQTEALDSK
PGADTTYKTVTSSTEKGLIVYCVTSPKKDDRYREPPPTPPGYMGISLADIKEGSPHHPHL
KPPDYSVAVQRSKMLHSDLSRLPPAALGSDAVACVSSRMPQWHGRQPSSPRLAELPDADS
EEDEDEQVSAV
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atggggagcggcgccggccgccccgggaacgccggcagcgcccgccagccgctgccgagg
cgccgcggggcgggggcgccgcgccggaggatgagcgccccggtggagcccaggatcaaa
caggcgctgcggaaaaagcccgccgagcgcactcccgaggacttgaatactatctattct
ttccttcatgggctggacatactatcacacttcagggagcatcagctaagaataatgtcg
tctagtgcccgctatgagaggtacaagggcaaccaagttctcttttgctcagaaactatt
gcaagatgctggtatatcctgctttctggatctgtgctcatgaaggattcaatgtttttg
ccaccttgcagttttggcaagcagtctggaggaaagcgaggatgcgaatgtatcatattg
gaaccttcagaaatgattgtggtggagaactctaaagacaatgaggaaaacatcttgcaa
agagaagtgccactgcggcagtcccgccgcaggtacaggaggatcaaccagaggggcgag
cgccagaccatcacggacaacgtggattccagcagctacgtgtcgcttccagctgacctt
accaagatgcacctcacggacaatccgcacccccaggtgacgcacgtcccttccagccag
tcgggctgcagcattgccagtgactctgggagcagcagcctgtctgatatctatcaggct
acagaaagtgagatgggagatgttgatttaacgggtcttccagaagcacctgtagactct
gaagatgaagaagaggaggaggatgaagatattgacagaacttctgatccacttctaggg
cgagatgttgtccgagagtgccttgagaaagagcctgcagataaaactgatgatgacatt
gaacaattattggaattcatgcaccagctccctgcctttgccaacatgaccatgtctgtg
aggagagagctgtgctcagtgatgatatttgaagtcgtagagcaagcaggagccatcata
cttgaagacggccaggaacttgattcttggtatgttattttaaatggcacagtagaaatc
agctatcctgatgggaagagtgagagtctctgtatgggaaacagttttgggattactccc
tcactggacaaacagtacatgaatggagtggtcagaaccaaagtagatgattgtcagttt
gtgtgtatagcccagcaagactactggaggattctgaaccatgtggaaaaaaacactcac
aaagtggaggaagaaggagaaattgtgatggtaaaggagcacagggagctggatcgcagt
ggaaccagaaaaggacacatagttatcaaggcaacacccgagagactcatcatgcactta
atagaagaacattctattgtggatccaacctacatcgaagatttccttttaacatacaga
acatttctaacaagtcccttggaagttggaaataaactcttggaatggttcacagtggac
agtctcagggataaggttaccagagtagtattactgtgggtgaacaatcattttaatgac
tttgaaggagatcctgccatgactcgattcctggaagaatttgaaaagaacttggaagat
acgaaaatgaaaggccatctcagattgctgaatattgcctgtgctgccaaagcaaaatgg
agacaaatcaccctgcaaaagccttccagagattctcccctgtttttcagccttctcgga
ggcagtgacaaagggtttggtatttttgtagagactgtggagataggcagcaaagcagca
gaagctggacttaagcgtggtgatcagataatggaagtaaatggacagaattttgagaac
attacctttgtaaaagctctggaaatcttaaagaataacacacatctctccattactgta
aaaacaaacatttttgtgtttaaggagctgctctgcaggataggacaggagaagaatgga
attccacatattccaaaaattgcagaaaagaaaaacaaccgttattctatcccagatatg
cctggagatgtggaacagatgtttcctcgtgaaaaaggaaacaagaaaatgaaagcaaac
actgtatctggtggaagaaacagaatcaggaaaattttagacaagacccgtttcagcatc
ttgcctccaaaactgttcagcgacggcagcgtgagccagtcccaggacgacagcatcgtg
gggacacggcagtgccgccacagcctggccatcatgcccattccaggcaccctttcatcc
agcagccctgacctgctgcagcccaccaccagcattctggatttctctaacccttcagct
gttgggttttactatattccagatcaagtgatacgagttttcaaagcagatcagcagagc
tgttacatcatcatcagcaaagacactacagcaaaggaggtggtgagtcatgctgtgcac
gagttcaacctgacgggagcccccgagacctattccctgtgtgaggtgtccgtcagcccc
gagggggtcatcaaacagcggcgcctcccggaccagttctccaagctggctgacaggatc
cagctcaatggacgttattatctgaaaaacaatatggaaacagaaaccctatgctcagat
gaggatgctcaagagctactccgagagagccaaatttccctgctgcagctgagcaccatt
gaggtggccactcagctttccatgcgggactttgagttgttccgcaacatcgagccaacg
gagtacatcgatgacctgtacaagctggactccaaaacagggaatgctcacctcaaacag
tttgaggatgtcatcaatcaagagaccttctgggttgccatggaaattttagcagaaccc
aaccagctcaaaagaatgaagattattaagcatttcattaaaattgctctccactgtcga
gaatgcaagaacttcaattccatgtttgcggtgataagtgggttaaatcttgcaccagta
gctcgtctcagaggcacttgggaaaagttacccagcaagtatgaaaagcacctcagagac
cttcaagatctttttgatccatctcgaaacatggcaaaatatcgcaacatcctcagcagc
cagagcatgcagcctccaattatcccacttttccctgttgtcaagaaagatatcacattt
ctgcatgaaggcaatgattctaaagtggatggcctggtgaattttgagaagctccgcatg
attgccaaagaaatccgccaggttgtgcgaatgacctctgcaaacatggatccagctgtg
atgttcagacaaaggaagaagaggtggagaagtttggggtctctgagccagggcagcatg
aactccaacatgctggacgtgcagggaggcgctcacaagaagcgcgcccgccgcagctcg
ctgctgaacgccaagaagctctacgaggatgcccagatggccaggaaggtgaagcagtac
ctgtccaacctcagtgtagagacagacgaagagaagatccagatattgtcacttcagtgt
gagcctgcatacagcactttgacaaagaatttaagtgagagaagaggagggaaatcctcc
gaaatgtctccagtgcccatgagatcaattggccaaaccacaaaagcccatcagcatcaa
caaaatcgaatgagtcaagttcttcaggtcccaactgtgaatttgtaccccagcaggaaa
aagggactgacaaaggaccatgtcacattcagtacaggctctccacagaagtcattaagt
ttgtctgaggaagtaagtagtaagaaacaagcagatgacactatgtccatggcatcttct
ttgcactccagcccacctgcttctcctcagggctccccacgcaaagttggcaacatccaa
aggtcggataactgcagtcagatgaatctctctggctcttcctcatcactggccagtgaa
accagcaacaagaacagtggacagcgcagctatggaataggctatgccctcataccttcc
actaaatccgacaacttctcagactccagtcacagcgagatctcatcgcgctccagcatc
gtgagcaactgctctgtggactccatgtcagcagcactgcaggatgagaggagtctttcc
cagtccctcatcgtggtggattcaggaggggcagagaggaaggagcatcctcaggcactg
acagattacggccagccctgcccggggtggtccatcactaggcctgctctgatcagaggg
atggcattcacatcttccatgagcagcgaggagatctcccatgagcacatcacggtagag
gcagcagacagcggccggggcagctggacttcctgctcaagtagttctcatgacaatttc
cagaatatcccaaaccagaagagctgggatctgctcagttcttaccgtcacacccagctg
gatggacctatagctgaagtagaacccacaaactgttactctgaggagggttatttgtat
tccgaagccttttccaaagccaacaggcagtcgaaagccagcgtggagctcgaccagtct
cggcagagctgggcatcctccagctccctgtcagacacttacgagacaaactatggcaca
attaagcggagggggctggagaactcctcggcggagcagacggaggctttggactctaaa
ccaggcgctgacacaacttacaaaactgttacttcgagtacagaaaaaggcctgatagtg
tactgtgtcacctcacctaagaaggacgataggtatagggagccaccgcccacccctccg
ggatatatggggatttctttagcggacattaaagaaggatcgccccaccacccacacctc
aaacctccagactatagtgtggcagtgcagaggtcaaagatgctgcacagtgacctctct
agacttccaccagctgctctgggtagcgacgcggtggcctgtgtctcctcgaggatgcct
cagtggcacggccggcagccgtccagccccaggctagcagagctgcctgacgcagatagt
gaagaggatgaagatgaacaagtatcagcagtttaa
DBGET
integrated database retrieval system
