Passer montanus (Eurasian tree sparrow): 120499830
Help
Entry
120499830 CDS
T07277
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04115
p53 signaling pathway
pmoa04210
Apoptosis
pmoa05164
Influenza A
pmoa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120499830 (APAF1)
04115 p53 signaling pathway
120499830 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
120499830 (APAF1)
05168 Herpes simplex virus 1 infection
120499830 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
NB-ARC
APAF1_C
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
APAF-1-like_WHD
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
CARD
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_HPS5
eIF2A
RMC1_N
Beta-prop_WDR35_TULP_N
PEP5_VPS11_N
Beta-prop_NWD2_C
WD40_RFWD3
Beta-prop_IFT140_1st
WD40_like
Beta-prop_SCAP
CARD_2
Beta-prop_NUP159_NUP214
Ge1_WD40
Beta-prop_DCAF4
Beta-prop_WDR11_2nd
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_VPS8
WDR54
AAA_16
Dark_WHD
DUF2415
AAA_22
Motif
Other DBs
NCBI-GeneID:
120499830
NCBI-ProteinID:
XP_039559962
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
MDVKSRNYLLMNRQALENDIKTSYIMDRMISDEVLTLQEEERVKQQNTRKERAAMLINII
LTKDNNSYRSFYNALLHEGYRDLAALLQDGIPAVSSGNRKSSMDGMTSYVKTILCEGGVP
QRPVVFVTRPKLVDAIKKKLYCLGSDPGWVTVYGMAGCGKTVLTAEALRDPQLLEVYFPG
GVHWISVGKQDKAGLLIKLQNLCSRLEHDSTLSQRPPLNIEEAKDRLRLLMLRKYPRSLL
VLDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVAGNKYEVHVESGLAHEKGLEILSLFVN
MKISELPEQANSLVRECKGSPLVISLIGALLRDFPSRWEYYLRQLQNKQFRRIRKSSSYD
YEALDEAMSISVEQLDDNYKDYYKDLSILPKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQLQELHKNIVNQYKKYYKLNTPVLSQEDC
MYWYNFLAYHMAGAKMQQELCDLMFSLDWIKAKTELVGPAHLIHEYVEYSSVLDQKDSTV
RENFQEFLSLNGHLLGRQPFPDIIQLGLCQPETSEVYQQAKLHAQRETGTFYLEWVNKKS
LKNLYRLVVRPHRDAVYHACFSKDRQRIASCGADKTLQVFKAESGERLLEINAHDDEILC
CTFSADGEFVATCSSDKKVKVWNSRTGQCRCVYEEHSEQVNCCQFNNKSGQYLLATCSND
TFIKIWDLNEKYCRNTMIGHENSVNHCRFSPNDEYVASCSTDGTVKLWEARSGNELKSIE
IKDFFKNADEQPDDVEVLVKCCSWSRNGNTILVVAKNKLLLFDINTCGLLTQVVVSHHST
IQYCDFCPGDELVAVALSHCSVELWNIKSLSKVAYCRGHMSWVHCVTFSPDGSLFLTSSD
DQTIRIWETKKVCKSSDAVLKSELDVLFHNGEVMILAIYNQKNLQLINGNTDNVIMQTAA
QESPISCCCLSEDLKFAAFGQESGTIKVLQLSDGKVLKSWQAYRTSVQHCRFTPDCQTLI
LSAHDSVIQVWNWQLSECVFLRGHKEAIKDFRLLENSKILSWSFDGTVKVWNITTGNPEK
DFACHGGAVLSCAVSPDGSKFSSASADKTAKIWSFESSSVVHELKAHEACVRCCAFSPDN
RLLATGDDKGEIRIWDVLTGALLHFCSPVTVEEGEPTHGGWVTDLCFSPDSKMLVSSGGY
LKWWNVTTGESLQTFYTNGTNLKSIHVSPNFKVYVTVDNLGILYVLQKF
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaagagtagaaactatttgcttatgaatcgtcaagcactggaaaatgacatc
aagacttcctatattatggatcgtatgatttctgatgaggtactgacattacaggaggag
gagagagtgaagcaacagaatacacgtaaggagcgagcagctatgctaataaacattatt
cttacaaaagataataattcatatagatccttttataatgcactgctccatgaagggtac
agagatcttgctgcacttcttcaggatggcatccctgctgtctcgtctggtaacagaaag
agttccatggacggaatgacttcctacgtgaagaccattctctgcgaagggggcgtacca
cagagaccagttgtgtttgtcactcgaccaaaactggtagatgctattaaaaagaagctg
tactgcttgggaagtgacccaggttgggtcacagtttatggaatggcaggctgtgggaag
actgttttaacagcagaagctttaagggatcctcagctcctggaagtttactttccagga
ggagttcattggatctctgttgggaaacaggacaaagcagggctgctcataaaactccag
aatctctgcagtagattggaacatgactccactctttcacaaaggccaccactgaacatt
gaggaggccaaggatcgtcttcgtttgctgatgttacgcaaataccccaggtctctcttg
gtcctggatgacatttgggattcgtgggtgttaaaagcattcgataatcaatgtcaggtg
ctcatcacgagcagggacaggagtgtaacagatgctgtggctggcaataaatacgaggtt
catgtggaaagtggactagcacatgagaaaggactggagattttatccctatttgtgaat
atgaaaatatcagaacttccagaacaagctaactcgcttgtaagagaatgcaaaggttct
cctcttgtgatatccttgataggtgcgttactccgagacttcccaagccgctgggaatat
tatctcaggcagctgcagaataagcagtttagaagaataagaaaatcttcctcctatgat
tatgaagcccttgatgaagcaatgtccataagtgttgagcagctggatgacaattacaaa
gactactataaagacctctctatcctcccaaaagatgttaaagtacctactaaggttctc
tgtattctttgggatatggaaactgaagaagttgaagatatactacaggaatttgttaac
aaatcactgttgttctgtgatcgcaatgggaagtcattccattattacttacatgatctt
cagcttgactttctcacagagaagaaccgcaaccagcttcaggagctacataaaaacata
gtaaatcagtacaagaaatattacaagcttaatacacctgttctgtctcaagaggattgc
atgtactggtataactttctggcatatcacatggcaggtgccaaaatgcagcaggagctc
tgtgatcttatgttttctttagattggattaaagctaagacagaattggtggggcctgct
catctaattcatgaatatgtagaatatagttcagtcctggatcaaaaggatagcacagtg
cgtgagaatttccaggagtttctgtccttaaatgggcacctgcttggacggcagccgttt
cctgacatcattcagctgggtctctgccagccagagacatcagaggtgtatcaacaggcc
aagctacatgctcaaagggaaacaggaacattctatttggagtgggtaaataaaaaatcc
ttgaaaaatctctaccgtctggttgttcgtcctcatcgagatgcagtttaccatgcctgc
ttttctaaggatagacaaagaatagcatcatgtggagctgacaaaactcttcaggtgttt
aaagcagaaagtggagagagactcctggagataaatgcccacgatgatgaaatactctgt
tgcactttttctgcagatggggaattcgtagcaacttgttcaagtgataaaaaagtcaag
gtctggaattcaagaacaggccagtgtaggtgtgtgtatgaagagcactctgagcaggtc
aattgctgccagttcaataacaaaagtggtcagtaccttctggccacctgctcaaatgac
actttcatcaaaatttgggatttgaatgaaaaatactgtagaaatacgatgataggtcac
gaaaattctgtcaatcactgcagattttcaccaaatgatgagtatgttgctagctgctcg
acagatggaacagtaaagctttgggaagcgcgctcaggaaatgaactgaaaagtattgag
ataaaagacttctttaaaaatgcagatgaacaaccagatgatgtggaagttttagtaaaa
tgttgctcttggtccagaaatggtaacacgattttggtggtagccaaaaataagcttttg
ctttttgacatcaacacctgtggtttgttgactcaagtcgttgtcagtcatcacagcaca
atccaatactgtgacttctgtcctggggatgagttagtagcagttgctttgtctcactgc
tctgttgagttatggaatattaagtctttatcaaaagtggcatattgcagaggacacatg
agctgggttcactgtgtgacattttcgccagatggatctttatttctgacctcatctgat
gaccagacaatacgtatctgggaaacaaagaaggtgtgcaaatcttctgatgctgtgctg
aagagtgagctagatgttttgtttcacaatggtgaagtgatgattttagccatctacaat
cagaagaatttacaactgatcaatggaaatacagacaatgttattatgcagacagcagcc
caagaatcccccatttcctgctgttgcttaagtgaagatcttaaatttgcagcttttgga
caggagagtggaacaataaaggtactgcagttgtcagatgggaaggttctgaagtcctgg
caggcctacaggacgtctgtgcagcactgtcgatttacacccgactgtcagaccctcatc
ttgagtgctcatgattcagttatacaggtatggaattggcaattgagtgaatgtgtgttt
ctcagagggcacaaggaagcaatcaaggattttagacttctggaaaattcaaaaattctc
tcttggtcatttgatggaactgttaaggtttggaatatcaccactggaaacccagaaaaa
gattttgcttgtcatggaggtgctgttctttcctgtgctgtttcacctgatggtagtaaa
ttttcatctgcttctgccgacaaaactgcaaagatatggagctttgaaagttcatctgtt
gttcacgaactgaaagcccacgaagcctgtgtgcggtgctgtgctttctctcctgataac
agactgttggccactggagatgataaaggagaaataaggatttgggatgttttaacaggt
gcattacttcatttctgctccccagttactgtagaggaaggagaaccaacacatgggggt
tgggtaacagacctctgcttttctcctgacagtaaaatgcttgtgtcatctggaggttat
cttaagtggtggaatgtaactactggagaatccttacaaaccttctacacaaatggaaca
aacctgaagtcaatacatgtgtcccctaatttcaaagtgtatgtgactgttgataatctt
ggcattctttatgtactacagaagttctga
DBGET
integrated database retrieval system
