Passer montanus (Eurasian tree sparrow): 120503195
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Entry
120503195 CDS
T07277
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04514
Cell adhesion molecules
pmoa04520
Adherens junction
pmoa04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120503195 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120503195 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
120503195 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmoa01009
]
120503195 (PTPRF)
Enzymes [BR:
pmoa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
120503195 (PTPRF)
Protein phosphatases and associated proteins [BR:
pmoa01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
120503195 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
PTP-SAK
Tc-R-P
DSPc
Y_phosphatase3
V-set
C2-set_2
PTPlike_phytase
PTP-NADK
Ig_C17orf99
Fn3_PTPRU
Insulin_TMD
DUF3377
ICAM_N
Motif
Other DBs
NCBI-GeneID:
120503195
NCBI-ProteinID:
XP_039567369
LinkDB
All DBs
Position
Unknown
AA seq
1922 aa
AA seq
DB search
MVPNFCIPVLTVPAAILCCLMLPLAGADSKPTFMKAPEDQIGISGGVASFVCQATGEPKP
RITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKL
TVLEEDHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTATSNG
RIKQLRSGGTPIRGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSI
PPSNHEVMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNNIMQSANY
TCVAISSLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNSDPISYYVIQYKP
KSLEGQFQEVDGVATTRYSIGGLSPFSEYEFRVIAVNNIGRGPPSELVEARTGEQAPSSP
PLKVQARMLSASTMLVQWEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTDDSHLTTVG
SLITGTTYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPAS
QERITKYELLYWEGEDGTQEKVEFDPTSSYAVEGLKPDTLYKFRLGARSELGVGVYTPTV
EARTAQSTPSAPPQEVECVSTSSTTIRVSWVPPPAQSRNGVITQYSIAYQAVEGDDNTKH
VVDGIGREHSSWEIKDLEKWTEYKVWVRAHTDVGPGPESIPVHVRTDEDVPSAPPRKVEV
ESVNSTAIRVSWKLPISNKQHGQIRGYQVTYVKLENNEPRGQPVIKDVMLSEAQWRAEDS
VDHETVIGGLLPETTYSVTVAAYTTKGDGARSKPKVITTTGAVPGKPTMMISTTAMNTAL
IQWHPPKEMVGELLGYRLQYRRLDEEKMNTIDFGKRDHHYTVTNLHKGATYLFKLSAKNR
AGPGEEFEKEITTAEDVPSGFPQNLRVVGLTTSTTEVAWDPPVLAERNGKIVNYTVVYRD
INSQQDLANITKDTSITLTNLKPDTTYDIKVRARTNKGAGPLSPSIQSRTMPVEQVFAKN
FRVNAVMKTSVLLSWEVPDSYKSAVPFKILYNSQSVEVDGHSMKKLISDLQPDTDYSFVL
MNRGSSAGGLQHLVSIRTAPDVLQSKPIATNKYIQEGKFTLTLPKVQTTVPVRWYYIVVV
PADQSTSTLTARWRTPDEMELDQLLEAISQGSQSRRQRRQADRLKPYIAAQVDVLPEIFT
LGDEKNYKGFYNKPLSQDLSYRCFVLASLEDGDTKRYAASPYSDEIVMEVASAKQQDEPE
MLWVMGPVLAVILIIIIVIAILLFKSKQERKRAHSPSAKDEHSIGLKDSLLAHSSDPVEM
RRLNYQTPGASVPCCPNISSMRDHPPIPVTDLADNIERLKANDGLKFSQEYESIDPGQQF
TWENSNLEVNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQG
PLPETLSDFWRMVWEQRTATIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVVLLDTVEL
ATYTVRTFALYKNGSNEKTELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPTDAGPMV
VHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALL
EAATCGNTEVPARNLFAHIQKLTQVPPGESVTAMELEFKLLANSKAHTSRFISANLPCNK
FKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWR
MLWEHDSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVT
DARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGR
TGVFITLSIVLERMRYEGVVDMFQMVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHY
AT
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaacttctgcatcccagtactcactgtgccagcagccatcctctgctgcttg
atgctgcctttagcaggagcggacagcaagccaacgtttatgaaggctcctgaagatcag
attgggatttctggaggagtggcctcttttgtgtgtcaggcaacaggagagcccaaacct
cgtatcacgtggatgaagaaggggaagaaagtcagttctcagcggtttgaggttattgag
ttcgatgatggatcgggatcagttctgcggatacagcccctgcgtgtccaccgagatgag
gctatctatgagtgcacagccaccaatagtgtgggggagataaacaccagtgccaagtta
acagtgttggaagaagaccacctcccagctggcttcccaaccattgacatgggcccgcag
ctgaaggtggtggaaaaggcccgcacagccacgatgctctgtgctgccagtggtaaccct
gatcccgaaatctcctggttcaaggacttcctgcccgtggacactgccaccagcaacggg
cgaatcaagcaactccgctcgggtggtacaccgatcagaggagctctgcaaatagagaac
agtgaggagtcagaccaaggcaaatatgaatgtgttgcaaccaacagcgcaggaacccgc
tactctgccccagccaacctttatgttcgagtgcggcgtgttgctcctcgattctctatc
cctccaagcaaccacgaggtgatgcctggagggagcgtgaacctcacgtgcgtggcagta
ggtgctccaatgccctacgtgaagtggatggctggtgtggaggagctgaccaaagaagat
gagatgcctgtcggtaggaatgtcctggagctgaataacatcatgcagtctgccaactac
acctgcgtggccatctcttcccttggcatgatcgaagccacagcccagatcactgtcaaa
gcactgccaaaacctccaacagagccattagtgactgaaacaacagctaccagtgtgacc
ctcacctgggattcaggcaactctgaccccatttcgtattacgtcatccagtacaagccc
aaatccctggaggggcagttccaggaggtggatggtgtggcaacaacccgctatagcata
ggtgggctcagccccttctcagagtacgagttccgggtcatcgccgtcaacaacatcggc
aggggtccccccagtgaactggtcgaggcccggacaggagagcaagctccttcaagtcca
cccctcaaagtccaggcacggatgctgagtgccagcaccatgctggtccagtgggagcag
ccggaggagcccaatggacagatccgagggtaccgcgtgtactacaccaccgacccgcac
ctgcctttgagcatgtggcagaagcacaacactgacgacagccacctcaccaccgtgggc
agcctcatcacaggcaccacctacagcatccgcgtcctggccttcacttcggtgggcgac
gggcccccctcggacatcatccaggtcaaaacacagcaaggggttcctgcccagccagct
gacttccaggcagaagcagagtctgatacccgcatcctgttgacatggctgcctgcctct
caggaacgcattactaaatatgagctgctgtactgggaaggggaggatggcactcaggaa
aaggtggagtttgacccaacctcctcatacgctgtggaaggtctcaaaccagacacgttg
tataagttccgtctgggtgcccgctcagagctgggggtaggagtttacacccccaccgtt
gaagccagaactgctcaatccaccccctccgccccaccccaagaagtcgagtgtgtaagc
accagctccaccaccatccgggtaagttgggtgccgccgcccgcccagagccgcaatggg
gtcatcacccagtactccattgcctaccaggcagtggaaggagatgacaacaccaagcat
gtggtggatggcattggacgggagcattccagctgggagatcaaggacctggagaaatgg
acagaatacaaggtgtgggtaagggctcacaccgatgtggggccaggaccggagagcatc
cccgtgcacgtgcgcactgacgaggatgtgcccagtgccccaccgcgaaaggtggaggtg
gagtctgtgaactcgactgccatccgggtgagctggaagctgcccatctccaacaagcag
cacgggcagatccgtgggtatcaggtgacctacgtgaagctggaaaacaacgagccccgg
gggcagccagtgatcaaggacgtcatgctgtcagaagcacagtggagagctgaggactcc
gtggaccatgagacagtcattggaggcctgctgccagaaaccacctactccgtcacagtt
gctgcctacaccaccaaaggagatggtgcccgcagcaagcccaaagtcatcaccaccaca
ggggcagtcccggggaagcccaccatgatgattagcacgacagccatgaacacagccctc
atccagtggcacccacccaaggagatggtaggggagctgctgggttaccggctgcagtac
agacgtctggatgaggaaaaaatgaacaccatagacttcgggaagagagaccatcactac
acagtgaccaacctgcacaagggggccacgtacctcttcaaattgtctgccaagaacaga
gctggcccaggagaggagtttgagaaggagatcacaactgctgaagatgtgccaagtggc
ttcccacagaacctgcgtgtggtgggtctcaccacttccaccacagaagttgcttgggac
cccccggtcttggcagaaaggaacggcaagattgtcaactacacggtggtatacagggac
ataaatagccagcaggacctggctaacatcaccaaggacacgagtatcactttgacaaat
ttgaaacctgataccacttacgacatcaaagtgagggcccgcaccaataagggggctggg
ccactcagccccagcatccagtcccggaccatgcctgtagagcaagtgtttgctaagaac
ttccgtgtcaatgccgtcatgaaaacatctgtgttgctgagctgggaagtgcctgactcc
tataaatctgcagtgccttttaagattctgtacaatagccagagtgtggaggtggacggc
cactcgatgaagaagctcataagtgacctccagccagacacggactattcttttgtgcta
atgaaccgtgggagcagtgcaggggggctccagcacctcgtctcaatccgcactgctcct
gatgtcttgcaaagcaaacccattgccacaaacaagtacatacaggaaggaaaattcaca
ctaactcttcccaaagtgcagaccactgtgccagttcggtggtactacattgtggttgtg
ccagcagaccagagcaccagcacgctgactgctcggtggcggacgcctgatgagatggag
ctggaccagctgctggaggccataagccaggggagtcagagcaggcggcagcgacgccag
gcagacaggctcaagccctacattgctgcccaagtggatgtgctgcctgagatcttcacc
ctgggggatgagaagaactacaaaggtttctacaacaagcctctgtctcaagacctgagc
tatcgctgcttcgtgctggcctcgctggaggacggggacacgaagagatatgcagccagc
ccctactcggatgagatcgtgatggaagtggcatcagcgaagcagcaggatgagccagag
atgctgtgggtgatgggacccgtcctggctgtgatattaatcatcatcattgtcattgcc
atacttctcttcaaaagtaagcaagaaaggaaaagggcacattccccctctgccaaggat
gagcactccatcggcctgaaggactcactcttggcccactcatctgacccagttgagatg
aggaggctcaactaccagactccaggtgccagtgtcccctgttgcccgaatatctcaagc
atgcgtgaccacccccccatccccgtgaccgacctcgctgacaacatcgagcggctcaag
gccaacgatgggctgaagttctcccaggagtacgagtccattgatcctgggcagcagttc
acctgggagaactccaacctggaagtgaataaaccgaaaaaccgctatgcaaatgtgata
gcctatgaccactcacgtgtcatcctgacttccatcgatggggtcccaggcagtgattac
atcaacgccaattacattgatggctatcggaagcagaacgcctacatcgctacgcaggga
ccgctgccggaaaccctcagcgacttctggaggatggtgtgggagcagagaacagcaact
atagtcatgatgaccaggctggaggagaagtccagggtaaagtgtgaccagtactggccg
agccggggcacagaaacctatgggatgatccaggtggtgctgctggatacagtggagctg
gcgacctacaccgtccgcacctttgcgctgtacaagaatggctccaatgagaagacagag
ctgcgacagttccagttcatggcttggcccgatcacggggtcccagaataccccacccca
atcctcgctttcctgcgacgggtcaaggcctgcaacccaacagatgctgggcccatggtt
gtgcattgcagtgctggtgtgggccgaaccggctgcttcattgtcatcgacgccatgctg
gagcggatgaagcacgagaagaccgtggacatctacggccacgtgacgtgcatgcgctcc
cagcgcaactacatggtgcagacagaggaccagtacatcttcatccacgaggccttgctg
gaggccgccacgtgcggcaacaccgaggtgcccgcgcgcaacctcttcgcccacatccag
aagctgacccaggtgccaccgggcgagagcgtcactgcaatggagctggaattcaagctg
ctggccaattctaaagcacatacctcacgtttcatcagtgccaacctcccttgcaacaaa
ttcaagaaccgcctcgtgaacatcatgccgtatgagctgacgagagtctgcctgcagccc
atccgcggcgtcgagggctctgactacatcaatgccagcttcatagatggctacaggcag
cagaaggcctacatcgccacgcagggaccactggctgagaccacagaggatttctggcgg
atgctctgggagcacgactccaccattgtggtgatgttgacaaagctgcgtgagatgggc
cgggagaagtgccatcagtactggcctgcagagcgctctgcccggtaccagtacttcgtg
gtggaccccatggcagagtacaacatgccacagtacatcctccgggagttcaaggtgaca
gatgccagggacggccagtcacggaccatccgccagttccagttcacagactggcctgaa
cagggagtgccaaagacaggagagggtttcattgacttcattgggcaggtgcacaagacc
aaggagcagtttggacaggatgggcccatcacggtgcactgcagcgctggggttgggcgc
accggcgtgttcatcacactcagcatcgtgctggagaggatgcgctacgagggcgtggtg
gacatgttccagatggtgaagaccttgcggacgcagcggccggccatggtgcagacagag
gaccaataccagctgtgctacagagccgcactggagtaccttggcagcttcgaccactat
gcaacgtaa
DBGET
integrated database retrieval system
