Passer montanus (Eurasian tree sparrow): 120508042
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Entry
120508042 CDS
T07277
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120508042 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmoa03400
]
120508042 (TDG)
Enzymes [BR:
pmoa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
120508042 (TDG)
DNA repair and recombination proteins [BR:
pmoa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120508042 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
120508042
NCBI-ProteinID:
XP_039577245
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MRHPRRREGEGNREEGSGCGGRPQQEHRGRRGESRHSARGPAPPPPHGPRPALRPHWPAR
SRERVGRGLAGRPAARPAAGATGAPGMEGPELGRYYAYLQQAQAFYSFPFHQMMTAAPST
EMMTEQPTLEGIPEPNIAQEPPKEVKKGGRKRKAKATEPKQPKKPAAKKEKPAKSKGKQE
KITDTFKVKRKVDRFNGVSEAELLTKTLPDILTFDLDIVIIGINPGLMAAYKGHHYPGPG
NHFWKCLFMSGLSNEQLNHMDDHTLPHKYGIGFTNMVERTTPGSKDLSSKEFREGGRILM
QKLQKYKPRIAAFNGKCIYEIFSKEVFGIKVKNLEFGLQPHKVPDTETLCYVMPSSSARC
AQFPRAQDKVHYYIKLKDLRDQLKGIAPNTEVQEVQYTFDLQLAQEDAKKMAVKEEKYDP
GYEAAYGGAYCDRAPYGTDQCSLSSNGTAESNPQYCEGSSFSEVPNGQWMTQSFADQIPE
FNAGMTREEEGSSM
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcatccccgccgccgggagggggaagggaacagggaagagggaagcgggtgcgga
ggccgccctcagcaggagcaccgcggccggcggggtgagtcgcgacacagcgcccgcggc
ccggccccgccgccccctcacggcccccgccccgccctgcgcccccattggccggcgcgg
tcacgtgagcgggtgggccgggggctcgcggggcggccggcggcgagacccgcggcggga
gcgacgggagcgcccggcatggagggccccgagctgggcagatactacgcatatcttcag
caagctcaagcgttttactcgtttcccttccatcagatgatgactgcagcgcccagcaca
gaaatgatgactgagcagccgactctagagggcattccagagccaaacattgctcaggag
cctccaaaagaagttaaaaaagggggaaggaaaagaaaagccaaagcaactgagccaaag
caacccaaaaagcctgctgctaaaaaagaaaaaccagccaagtcaaaaggcaaacaagaa
aagatcacagatacttttaaagtcaaaagaaaagtggaccgttttaatggtgtatctgaa
gctgaacttctgaccaagactttgcctgatattttgacctttgatctggacattgtgata
attggcataaatcctggcctgatggcagcttacaaaggacatcattacccaggacctgga
aaccatttttggaagtgtctgttcatgtctggtctaagtaatgagcagctgaaccacatg
gatgaccataccttgccacataaatatgggattggatttacaaacatggttgaaaggaca
acacctggaagcaaagacctctccagcaaagagtttcgggaaggagggcgaattctgatg
cagaagctacagaagtataaacctcgtatagcagcttttaatggaaaatgtatttatgaa
atttttagtaaagaagtttttggaattaaagttaagaacttggaatttgggctgcagcca
cacaaagtgccagatacagaaactctctgctatgttatgccatcatccagtgcaagatgt
gctcagtttcctcgggcacaagataaagttcattattacattaagctgaaagacttaagg
gatcaactgaaaggcattgcacccaacacggaggtccaggaggtgcagtacacatttgac
ttgcagcttgcacaagaggatgctaaaaagatggctgtcaaagaagaaaagtatgaccca
ggctacgaagcagcgtatggaggagcttactgtgaccgtgcaccgtatggcacggaccag
tgcagcttgtcttcaaatggaactgcagaaagcaatccacagtactgcgaagggtcgtcc
ttcagcgaggttcctaatggacagtggatgacacagtcctttgcagaccagattccagag
ttcaatgctggcatgacacgggaagaggagggaagcagcatgtag
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