Passer montanus (Eurasian tree sparrow): 120511020
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Entry
120511020 CDS
T07277
Symbol
AGRN
Name
(RefSeq) LOW QUALITY PROTEIN: agrin
KO
K06254
agrin
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04512
ECM-receptor interaction
pmoa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120511020 (AGRN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120511020 (AGRN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pmoa00535
]
120511020 (AGRN)
Proteoglycans [BR:
pmoa00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
120511020 (AGRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
Kazal_CFAI
EGF_laminin
SEA
EGF
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
120511020
NCBI-ProteinID:
XP_039583515
LinkDB
All DBs
Position
Unknown
AA seq
2162 aa
AA seq
DB search
MQICALSSRAAAASAERSSRSPPPPPPPPGIFLLLPSPRSLPPSSLSFLLFHLLEQKWPF
GLRRRCLASAAALSAGVSGTATATAMGTRRALAALALLALALASCPERELQRREEEANVV
LTGTVEEIMNVDPVHHTYSCKVRVWRYLKGKDIVTHEILLDGGNKVVIGGFGDPLICDNQ
VATGDTRIFFVNPAPQALWPAHRNELMLNSSLMRITLRSLEEVEHCVEEHRKLLADKPNS
YFTQTPPPPRDGCRGMLCGFGAVCERSPSEPGQASCVCRKGPCAPVVAPVCGSDHSTYSN
ECELDRAQCNQQRRIKVVSKGPCGSKDPCAEVTCSFGSTCVPSPDGQVAKCVCPSSCSGV
PESPVCGSDGRDYRSQCHLNKHACDKQENVFKKFDGPCDPCQAVPSEPGRVCRVNPRTRR
AELLPRPEGCPPGRDPACGDDGVTYDSECAMARAGAIRGMDIQKVRSGQCQPQDKCQEEC
RFNAVCLNRRGAARCSCERIACDGAFRPLCGRDGRTYGSECQRRRAECLQQQHIPARHSG
PCDLGAPSPCLSVECSFGATCVVKNQQAVCECQQQCQGRYDPVCGTDQRTYGNPCELHAM
ACLLQRDIGLRHKGPCERCGKCQFGAICEAESGRCVCPTECVPSAQPVCGTDGNTYGSEC
ELHVRACTQQKNILVAAQGPCRSCGSSVCSFGSRCVGGQCLCPRCERQPPAPVCGTDGVT
YDSPCQLQVASCQLQKSIEVARMGPCEDECGSGGSGSGDGSECEQERCRQFGGWWDEDAE
DEPCVCDFTCAAVPRGPVCGSDGVTYGSECELKKTRCEKRQELFVTGQGACRGLATTPPP
LLVVHCSQTVYGCCPDNVTLALGVGAAGCPSTCQCNPYGSYGGSCDPGTGQCSCKPGVGG
LKCDRCEPGFWNFRGIVTDGRSGCTPCHCDPVGSVRDDCEQMSGLCSCRTGITGMKCTQC
PDGSTLGTAGCHKDPSAPRSCEELSCDFGASCVELNGFAHCECPSPLCPEANTTKVCGSD
GVTYGDQCQLRTIACRQGQHITVKHVGQCHGECPRAYHTECPQDSAMLSVPRAVPLSVPW
AVPCPVSLGQCHXVSPGQAPPTERGHPATRRVTTARPATTAWATPGVPRATVRPLVTVPV
VAGTSQPGYGESGSAEGSGDQDMGTSGDQESSGAGSAGEEELAEAQVTSTPAIERATCYN
SALGCCADGKTAMADSEGSNCPATKVFQGVLILEEVEGQELFYTPEMADPKSELFGETAR
SIESALDELFRGSDVRKDFRSIRVRDLGQSSAVRVIVEAHFDPATSCTAADVQGALLKQL
RAAKRKTILVKQPQQEHIKFMDFDWIPRLFTTTVTTTTATTMAPGTTRRVPAPTAAPGQQ
GEPGGSPGPVLGTLRSPGSTPRSPGSTPRSPGSTRSPGSTRSPGSSSSSRRKPTPLPPGT
APAPRPCQSQPCLHGGTCQDDGHNFSCSCPAGRGGAVCEKSPASSPWEAAFGGRSVLALR
TLRAYHTLRIALEFRALEPSGLLLYNAQRHGKDFISLALRAGFAQLRFDTGSGTGTVTSR
VRVAPGRWHRLLVTRNRRTGTLAVDGEPPVSGHSPPGTDGLNLDTELFIGGVPDEHAALA
AERTGASGGLRGCVRALAINNRGHELRQGAGDVLYASGVGECGTEPCQPSPCHHGGTCHA
QDLGMFQCQCPEAYTGPTCALERNPCEPSPCHPSATCLVLPAGGALCACPVGREGTLCER
VTEQDQSVPFLPEFNGFSYLELNGLQSFVPDLQDKLSMEVVFLARQPSGMIFYNGQRSDG
RGDFVSLALHRGHLEFRYDLGKGPALLRSREPVPLDTWVSVLLERSGRKGVLRVNNGPGV
TGESPKSRKVPHMVLNLKEPFYVGGAPDFSKLARAAAISSGFHGAVQRISLEGVPVLKEQ
NIRSAREVSPFRGHPCTQKPNPCQHGGSCSPSLGGYHCSCHRGFSGEHCEKVIIEKAAGD
AEAVAFDGHTYLEYHNAVTKSEKALQSNHFELSIKTEATQGLLLWSGKGLDRADYIALAI
VDGFVQLSYDLGSKAVTLRSSVPVNTNQWVHIRASRVQREGSLQVGNEAPIAGSSPLGAT
QLDTDGALWLGGLDKLSVPQRLPKAFSTGFVGCMRDVLVDRRELHLLEDALNQPRILHCS
AK
NT seq
6489 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatctgcgcgctttcttccagggccgcggcggcgagcgccgagcgctcctccaga
tctcctcctcctcctcctcctcctcctgggattttcctccttctcccctcccctcgctcc
ctccctccctcctctctttctttcctcctttttcacctcctggaacaaaagtggcccttt
gggctgcgccggcgctgccttgcgagcgcggccgctttgtctgccggggtcagcggcacc
gccaccgccaccgccatggggacacggcgggcgctggcagcgctggcactgctggcgctg
gcgctggccagctgccccgagcgggagctgcagcgccgggaggaggaggccaacgtggtg
ctgacgggcacggtggaggagatcatgaacgtggacccggtgcaccacacctactcgtgc
aaggtgcgggtctggcgctacctgaagggcaaggacatcgtcacccacgagatcctgctg
gacgggggcaacaaggtggtcatcgggggcttcggggacccgctgatctgtgacaaccag
gtggccacgggggacacgcgcatcttcttcgtcaaccccgcgccgcaggcgctgtggccg
gcgcaccgcaacgagctcatgctcaactccagcctgatgcgcatcacgctgcgcagcctg
gaggaggtggagcactgcgtggaagaacataggaagcttctggccgacaaacccaacagt
tacttcacacagacgccgccgccgccgcgggatgggtgccggggcatgctctgtggcttc
ggggccgtgtgcgagcgcagcccctcggagccgggccaggcctcgtgcgtgtgcaggaag
ggtccctgtgcccccgtggtggccccggtgtgcggctccgaccactccacctacagcaac
gagtgcgagctggaccgggcgcagtgcaaccagcagaggaggatcaaggtggtcagcaag
ggaccctgcggctccaaggacccctgcgcggaggtgacctgcagctttggcagcacgtgt
gtcccctcccctgacggccaggtggccaagtgcgtgtgtccctcgtcgtgcagcggcgtc
cccgagagccccgtgtgcggcagcgacggccgcgactaccgcagccagtgccacctcaac
aagcacgcctgcgacaagcaggagaacgtcttcaagaagttcgacggcccctgcgacccg
tgccaggccgtgccgagcgagccgggccgcgtgtgccgggtgaacccgcggacgcggcgg
gcggagctgctgccccggcccgagggctgtcccccgggcagggacccggcctgcggcgac
gacggcgtcacctacgacagcgagtgcgccatggcgcgcgccggcgccatccggggcatg
gacatccagaaggtgcgctcggggcagtgccagccgcaggacaagtgccaggaggagtgc
aggttcaacgcggtgtgcctgaaccggcgcggggccgcgcgctgctcctgcgagcgcatc
gcctgcgacggcgccttccggcccctgtgcggccgcgacggccgcacctacggcagcgag
tgccagcggcgccgcgccgagtgcctgcagcagcagcacatccccgcccgccacagcggg
ccctgcgacctgggcgcgcccagcccctgcctgagcgtggagtgctccttcggggccacg
tgcgtggtgaagaaccagcaggccgtgtgcgagtgccagcagcagtgccagggccgctac
gaccccgtgtgcggcaccgaccagcgcacctacggcaacccctgcgagctgcacgccatg
gcctgcctgctgcagagggacatcggcctgcgccacaaggggccctgcgagcgctgtggg
aagtgccagttcggtgccatctgcgaggcggagagcgggcgctgcgtgtgccccaccgag
tgcgtgccctcggcgcagcccgtctgcggcaccgacggcaacacctacggcagcgagtgc
gagctgcacgtccgagcctgcacccagcagaagaacatcctggtggctgcccagggcccc
tgcaggtcgtgtggcagctccgtgtgctcctttggtagccgctgtgtgggtgggcagtgc
ctgtgcccgcgctgcgagcgccagcccccggcccccgtctgcggcaccgacggcgtcacc
tacgacagcccctgccagctgcaggtggcctcgtgccagctgcagaagagcatcgaggtg
gccaggatgggaccctgtgaggacgagtgtggctcggggggctctggctcgggggacggc
agcgagtgcgagcaggagcggtgccggcagttcgggggctggtgggacgaggacgccgag
gacgagccctgcgtgtgcgacttcacctgcgcggccgtgccccgcggcccggtgtgcggc
tctgacggcgtcacctacggcagcgagtgcgagctgaagaagacgcggtgtgagaaacgc
caggagctctttgtcaccggccagggagcctgcaggggcctggccaccaccccgccgccg
ctgctggtggtgcactgcagccagaccgtgtacggctgctgccccgacaacgtcaccctg
gcgctgggcgtgggagcagccggctgtcccagcacgtgccagtgcaacccgtacggctcc
tacggtggctcctgtgacccgggcacgggccagtgctcctgcaagcccggcgtgggcggc
ctcaagtgcgaccgctgcgagcccggcttctggaacttccgcggcatcgtcaccgacggc
cggagcggctgcacgccgtgtcactgtgaccccgtgggctcggtgcgggatgactgcgag
cagatgtcggggctgtgctcctgcaggacgggcatcacgggcatgaagtgcacccagtgc
cccgacggcagcacgctgggcaccgcgggctgccacaaggacccctcagcccccaggtcc
tgcgaggagctgagctgtgacttcggggcctcgtgcgtggagctgaacggcttcgcccac
tgcgagtgcccgtccccgctgtgccccgaggccaacaccaccaaggtgtgtggctctgat
ggtgtcacctacggggaccagtgccagctgcggaccatcgcctgcaggcagggccagcac
atcacagtcaagcacgtggggcagtgccatggtgagtgtccccgggcataccacactgag
tgtccccaggacagtgccatgctcagtgtccccagggcagtgccattgagtgtcccctgg
gcagtgccatgcccagtgtccctggggcagtgccattgagtgtcccctgggcaggcgccg
cccaccgagcgaggccaccccgccaccaggcgtgtgacaacagccaggccggccaccacg
gcctgggccacccccggcgtgcccagggccaccgtccgcccgctggtcaccgtgcccgtg
gtggcgggcaccagccagccgggctacggcgagtccggcagcgccgagggcagtggggac
caggacatgggcaccagcggggaccaggagtccagcggggcgggatctgccggcgaggag
gagctggccgaggcccaggtgacatccacgcctgccatcgagagggccacgtgctacaac
agcgccctgggctgctgcgccgacggcaaaaccgccatggccgacagcgagggcagcaac
tgccccgccaccaaggtgttccaaggagtgctgatcctggaggaggtggagggccaggag
ctgttctacaccccggagatggccgaccccaaatccgagctcttcggggagacggcgcgg
agcatcgagagcgcgctggacgagctgttccgaggttctgatgtcaggaaggatttcagg
agcatccgcgtgcgggacctgggccagagcagcgccgtcagggtcatcgtggaggcccac
tttgacccagccacgtcctgcacggctgctgatgtccagggggctctgctgaagcagctc
cgagctgccaagagaaaaaccatcctggtgaagcagccccagcaggagcacatcaaattc
atggattttgactggatcccccggctcttcaccaccaccgtcaccaccaccacggccacc
accatggcaccgggcaccacccgcagggtgcccgcgcccaccgcggccccggggcagcag
ggcgagcccgggggcagccccggccccgtgctgggcaccctcaggagccctggcagcacc
cccaggagccctggcagcacccccaggagccctggcagcaccaggagccctggcagcacc
aggagccctggcagcagcagcagcagcaggaggaagcccaccccgctgccccctggcacc
gcgcccgccccgcggccctgccagtcccagccctgcctgcacggtggcacctgccaggac
gacgggcacaacttcagctgcagctgccccgcgggcagaggaggggctgtgtgtgagaaa
tccccagcctccagcccgtgggaggcggcgttcgggggccgctcggtgctggcgctgcgc
acgctgcgcgcgtaccacacgctgcgcatcgcgctggagttccgcgcgctggagcccagc
gggctgctgctctacaacgcgcagcgccacggcaaggacttcatctcgctggcgctgcgg
gccggcttcgcgcagctcaggtttgacacgggctctggcacgggcaccgtcaccagccgc
gtgcgggtggcgccggggcgctggcaccggctgctggtgacgcggaaccggcgcacgggc
acgctggccgtggacggggagccccccgtgagcgggcacagccccccgggcaccgacggg
ctcaacctggacaccgagctcttcatcgggggcgtgcccgacgagcacgccgcactggcg
gccgagcgcacgggtgccagcggcggcctgcggggctgcgtgcgggcgctggccatcaac
aaccgcgggcacgagctgcgccagggcgccggcgacgtgctgtacgccagcggcgtgggc
gagtgcggcaccgagccgtgccagcccagcccctgccaccacgggggcacctgccacgcc
caggacctcggcatgttccagtgccagtgccccgaggcctacacgggccccacgtgtgcc
ttggagaggaacccgtgcgagccgtcgccgtgccacccctctgccacgtgcctggtgctg
cccgccgggggggcgctgtgcgcgtgccccgtgggccgcgaggggaccctgtgcgagcga
gtgacagagcaggaccagtccgtgcccttcctgcccgagttcaacggcttctcctacctg
gagctcaacgggctgcagagcttcgtgcccgacctgcaggacaagctgtccatggaggtg
gtgttcctggcccggcagcccagcgggatgatcttctacaacgggcagaggagcgacggc
agaggggacttcgtgtcgctggcactgcaccgcgggcacctggagttccgctacgacctg
ggcaaggggcccgccctgctcaggagcagggagccggtgcccctggacacgtgggtcagt
gtcctgctggagcggagcggccgcaagggcgtcctgagggtcaacaacggccccggggtg
accggggagtccccgaaatcccgtaaggtgccccacatggtgctgaacctcaaggagccc
ttctacgtggggggagcccccgacttctccaagctggctcgagcagctgccatctccagc
ggcttccacggagctgtgcagaggatctccctggagggcgtgcccgtgctgaaggagcag
aacatccgcagtgccagggaggtgtccccgttccgggggcacccctgcacccagaagccc
aacccgtgccagcacgggggctcctgcagccccagcctggggggctaccactgctcctgc
cacaggggcttctcgggggagcactgcgagaaggtgatcatcgagaaggcggcgggggac
gccgaggccgtggccttcgatggccacacgtacctggagtaccacaacgctgtcaccaag
agcgagaaggcgctgcagtccaaccactttgagctgagcatcaagacggaggcgacgcag
gggctgctgctgtggagcgggaaggggctggacagggccgattacatcgcgctcgccatc
gtggacggcttcgtgcagctcagctacgacctgggctccaaggccgtcacgctgcgctcc
agcgtgcccgtcaacaccaaccagtgggtgcacatccgcgcctcccgggtgcagagggag
ggctccctgcaggtggggaacgaggcccccatcgccggctcctctcctctcggggccacc
cagctggacacggacggggcgctgtggctggggggtctggacaagctgagcgtgccccag
cgcctgcccaaggccttcagcacgggtttcgtgggctgcatgcgggacgtgctcgtggac
cggcgggagctgcacctgctggaggacgccctgaaccagccccggatattgcactgctcg
gccaaatag
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integrated database retrieval system
